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The map label for this gene is rbsC [H]

Identifier: 13472949

GI number: 13472949

Start: 2735138

End: 2736199

Strand: Reverse

Name: rbsC [H]

Synonym: mll3405

Alternate gene names: 13472949

Gene position: 2736199-2735138 (Counterclockwise)

Preceding gene: 13472950

Following gene: 13472948

Centisome position: 38.89

GC content: 66.48

Gene sequence:

>1062_bases
ATGACCTCGACATCACCAGCCCAGCCTGCCGAGAAGCACGTCGCCCCTCAGGCCGATCATGGCGATCCGGCCCGAAGCCT
GGTCGCTCATATCGCCGAAGGGCGCGCCTGGCTGTTCCTGGCCGGACTGCTCATCTGTTTCGAGGTCTGGTCGCGGCTCG
CCTTCGGCGCGACCTTCGTGCTCAATCCGTTCAACCTGCAGTCCATCGCCATCTTCGCCGTGGCGCCGCTGCTGCTGGCG
ACCGGCCAGACCTTCGTCATCATTTCGGGCGGCATCGATCTGTCGCTCGGCTTTATCATGGGCCTGGCTGCCGTCATCGC
CGCGCATGCCACCAACATGGCGGGCGCCGCCATTCCCCTGCCGCTGGCCATGCTGGCCGGCATCCTTGCCTCGGTGATCG
TTGCCGGCGTGCCGGGCGTCATCAACGGCCTGCTGATCTCGCGGCTCAAAGTGCCGCCTTTCATCGGCACGCTCGGCATG
TTCGGCGTTGCGCGCGGTGCCGCCTTCCTGCTTGCCGGCGGCACCACCGTGCCGGTGCAGAATTCCTGGTTCGCGCTGCT
CGGCAACGGCAAGTTCTATGGCGTGCCCTATCTGGTGCTGATCACCGTGGTTTTCGTCATCGCCATGCACTACCTGCTCA
GCCAGACCCGGTTCGGCCAGCACAACTACGCCATCGGCGCCAATGTGCAGGCGGCGCGGCGGGCCGGCATCGACATCAGG
GGCCACATATTGCGGCTCTATGTGCTGTCGGCGATGTGCGCCGGCCTCGGCGGCGCGCTCTATGCCGCGCGCTTCACGGC
GGGCGCCGCACAGGCCGGCGAACCCCTGCTGCTCGACAGCGTGGCGGCGGTGGTGATCGGCGGCGCCAGCCTGTTCGGCG
GCTCCGGCACCATCTTCGGCACGGTCGCTGGCGCGCTGGTGATCGCGGTCATCCAGTACGGGCTGGTCTTCGTCAATGTC
GAGCCGTTCTGGCAATTCATCGCCGTCGGCGTCGTCATCATCATTTCCGTCCTTATCGACCAGGCGCAGCGCCGGTTCAG
TGGAGCCCGTCAGGATGAATAG

Upstream 100 bases:

>100_bases
CCGAGTAAGTCCAGCATTGGCTCCTCCCGGTCCGCCCGGGGGGAGCCCGCACCGGGTCCCTCGCCAATCGAGACCCGTTT
GAAGGCGCCGCGGAGTATCC

Downstream 100 bases:

>100_bases
CACCAATCACAACGCGCCCCTGCTGGAAGTCCGCAATCTCTCCAAGCACTTCGGCGCCGTGCGTGCGCTCAACGACTTCT
CCATGGCCGTGCGGCCGGGC

Product: ribose ABC transporter, permease protein

Products: ADP; phosphate; ribose [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 352

Protein sequence:

>353_residues
MTSTSPAQPAEKHVAPQADHGDPARSLVAHIAEGRAWLFLAGLLICFEVWSRLAFGATFVLNPFNLQSIAIFAVAPLLLA
TGQTFVIISGGIDLSLGFIMGLAAVIAAHATNMAGAAIPLPLAMLAGILASVIVAGVPGVINGLLISRLKVPPFIGTLGM
FGVARGAAFLLAGGTTVPVQNSWFALLGNGKFYGVPYLVLITVVFVIAMHYLLSQTRFGQHNYAIGANVQAARRAGIDIR
GHILRLYVLSAMCAGLGGALYAARFTAGAAQAGEPLLLDSVAAVVIGGASLFGGSGTIFGTVAGALVIAVIQYGLVFVNV
EPFWQFIAVGVVIIISVLIDQAQRRFSGARQDE

Sequences:

>Translated_353_residues
MTSTSPAQPAEKHVAPQADHGDPARSLVAHIAEGRAWLFLAGLLICFEVWSRLAFGATFVLNPFNLQSIAIFAVAPLLLA
TGQTFVIISGGIDLSLGFIMGLAAVIAAHATNMAGAAIPLPLAMLAGILASVIVAGVPGVINGLLISRLKVPPFIGTLGM
FGVARGAAFLLAGGTTVPVQNSWFALLGNGKFYGVPYLVLITVVFVIAMHYLLSQTRFGQHNYAIGANVQAARRAGIDIR
GHILRLYVLSAMCAGLGGALYAARFTAGAAQAGEPLLLDSVAAVVIGGASLFGGSGTIFGTVAGALVIAVIQYGLVFVNV
EPFWQFIAVGVVIIISVLIDQAQRRFSGARQDE
>Mature_352_residues
TSTSPAQPAEKHVAPQADHGDPARSLVAHIAEGRAWLFLAGLLICFEVWSRLAFGATFVLNPFNLQSIAIFAVAPLLLAT
GQTFVIISGGIDLSLGFIMGLAAVIAAHATNMAGAAIPLPLAMLAGILASVIVAGVPGVINGLLISRLKVPPFIGTLGMF
GVARGAAFLLAGGTTVPVQNSWFALLGNGKFYGVPYLVLITVVFVIAMHYLLSQTRFGQHNYAIGANVQAARRAGIDIRG
HILRLYVLSAMCAGLGGALYAARFTAGAAQAGEPLLLDSVAAVVIGGASLFGGSGTIFGTVAGALVIAVIQYGLVFVNVE
PFWQFIAVGVVIIISVLIDQAQRRFSGARQDE

Specific function: Part of the binding-protein-dependent transport system for ribose. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4158

COG function: function code R; Predicted ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790191, Length=322, Percent_Identity=33.5403726708075, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI145693152, Length=289, Percent_Identity=29.4117647058824, Blast_Score=130, Evalue=1e-31,
Organism=Escherichia coli, GI1790524, Length=283, Percent_Identity=32.1554770318021, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1788896, Length=339, Percent_Identity=33.3333333333333, Blast_Score=129, Evalue=2e-31,
Organism=Escherichia coli, GI87082395, Length=288, Percent_Identity=34.375, Blast_Score=120, Evalue=2e-28,
Organism=Escherichia coli, GI145693214, Length=248, Percent_Identity=37.9032258064516, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1788471, Length=284, Percent_Identity=35.2112676056338, Blast_Score=109, Evalue=3e-25,
Organism=Escherichia coli, GI1789992, Length=137, Percent_Identity=36.4963503649635, Blast_Score=102, Evalue=4e-23,
Organism=Escherichia coli, GI1787793, Length=268, Percent_Identity=32.089552238806, Blast_Score=102, Evalue=5e-23,
Organism=Escherichia coli, GI1787794, Length=277, Percent_Identity=30.6859205776173, Blast_Score=80, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 36547; Mature: 36415

Theoretical pI: Translated: 9.43; Mature: 9.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSTSPAQPAEKHVAPQADHGDPARSLVAHIAEGRAWLFLAGLLICFEVWSRLAFGATFV
CCCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHEE
LNPFNLQSIAIFAVAPLLLATGQTFVIISGGIDLSLGFIMGLAAVIAAHATNMAGAAIPL
ECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
PLAMLAGILASVIVAGVPGVINGLLISRLKVPPFIGTLGMFGVARGAAFLLAGGTTVPVQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCC
NSWFALLGNGKFYGVPYLVLITVVFVIAMHYLLSQTRFGQHNYAIGANVQAARRAGIDIR
CCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCCHH
GHILRLYVLSAMCAGLGGALYAARFTAGAAQAGEPLLLDSVAAVVIGGASLFGGSGTIFG
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCCCHHHH
TVAGALVIAVIQYGLVFVNVEPFWQFIAVGVVIIISVLIDQAQRRFSGARQDE
HHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
TSTSPAQPAEKHVAPQADHGDPARSLVAHIAEGRAWLFLAGLLICFEVWSRLAFGATFV
CCCCCCCCHHHCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHEE
LNPFNLQSIAIFAVAPLLLATGQTFVIISGGIDLSLGFIMGLAAVIAAHATNMAGAAIPL
ECCCCHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCCHHHH
PLAMLAGILASVIVAGVPGVINGLLISRLKVPPFIGTLGMFGVARGAAFLLAGGTTVPVQ
HHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCEEEEECCCCCCCC
NSWFALLGNGKFYGVPYLVLITVVFVIAMHYLLSQTRFGQHNYAIGANVQAARRAGIDIR
CCEEEEEECCEEECHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCHHHHHCCCCHH
GHILRLYVLSAMCAGLGGALYAARFTAGAAQAGEPLLLDSVAAVVIGGASLFGGSGTIFG
HHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCHHHCCCCCHHHH
TVAGALVIAVIQYGLVFVNVEPFWQFIAVGVVIIISVLIDQAQRRFSGARQDE
HHHHHHHHHHHHHCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; ribose [Periplasm]; H2O [C]

Specific reaction: ATP + ribose [Periplasm] + H2O = ADP + phosphate + ribose [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7921236; 9353933; 9384377 [H]