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The map label for this gene is phnD [H]

Identifier: 13472909

GI number: 13472909

Start: 2696672

End: 2697580

Strand: Direct

Name: phnD [H]

Synonym: mlr3355

Alternate gene names: 13472909

Gene position: 2696672-2697580 (Clockwise)

Preceding gene: 13472908

Following gene: 13472910

Centisome position: 38.33

GC content: 62.71

Gene sequence:

>909_bases
ATGTTCAGGAAGATGGTTTTCAGCGCCGTTTCGGTGCTCGCCATGGCGACCAGCATGGCCCACGCCGCCGACATGAAGGA
ATTCCGCGTCGGCATTCTGGGCGGTGAAAACGAGACCGACCGGCTGCGCAACTACCAGTGCCTGGCCGACCATCTGAAGG
CCGAATTCGGCTTCGAGAAGGTCTCGCTGTTCCCCGCCGCCGACTATGACGGCGTCATCCAGGGCCTGCTCGGCGGCACG
CTCGACTTCGCCGAACTCGGCGCCTCCGGCTATGCCAGCGTCTATCTCAAGGACCCGAAGGCGGTAACCCCGATCCTCAC
CACCAAGCAGACCGACGGTTCCACCGGCTATTATTCGATCGGCCTGGCTCTGAAGACCTCGGGCATCACCGACATCAAGT
CGGCCAAGGGCAAGAAGCTCGGCTATGCTGACCCGGATTCGACCTCCGGCTACCTGATCCCGCTGACCCAGATTCCGAAG
ACCACTGGCGCCTCGAACGAAGCCTTCTTCGCCTCGACCCAGTTCAATGGCGGCCATGAGAACAACATCCTGGCCGTGCG
CGACGGCAAGGTCGATGTCGCGGTCGACGATTCATCCGGCATCGGCGACTTCAAGAACGGCTTCACCTCCGGCACCTTCC
ACAAGGTCGTCGCCAAGGGCGCCGTCGACCCGAACGACTTCGTCGAAGTCTGGCGCTCGGGCCTGATCCCGAACGGCCCG
CTGGTCGTGCGCACCGCGCTCGGCGACCAGATGACCGCCAAGCTCGCCGCCTTCTTCACCGAGCTGCCGAAGAAGGACAA
GGCTTGCTTCGAGGGCGTCGAAGGTGGCGATTTCACCGGCTACGTTCCGGTGAAGCCAGACTTCTACAAAGTCATCGTCG
AAGCCCGTAAGGCAGCCATCGGCGGCTAA

Upstream 100 bases:

>100_bases
GGGATACTGAGCGCACTGGATCGTCCGCCCGCGTCAAGGGCACTTGTCAAGATCAAGAACGCTGCCGGCGCGGGGCCGGA
ACTTACAGGAGAGACATCAA

Downstream 100 bases:

>100_bases
CGGCGAAATCGGAAAGGGCGGTGCTGAAGCACCGCCCTTTTTGCATCTCCGATCATGACCCTTTCCGTGACAGCCCCCTC
ATTGACGGCCTCTTCTGGCG

Product: periplasmic binding protein component

Products: 3-phospho-serine [Cytoplasm]; phosphate [Cytoplasm]; alkylphosphonate [Cytoplasm] [C]

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MFRKMVFSAVSVLAMATSMAHAADMKEFRVGILGGENETDRLRNYQCLADHLKAEFGFEKVSLFPAADYDGVIQGLLGGT
LDFAELGASGYASVYLKDPKAVTPILTTKQTDGSTGYYSIGLALKTSGITDIKSAKGKKLGYADPDSTSGYLIPLTQIPK
TTGASNEAFFASTQFNGGHENNILAVRDGKVDVAVDDSSGIGDFKNGFTSGTFHKVVAKGAVDPNDFVEVWRSGLIPNGP
LVVRTALGDQMTAKLAAFFTELPKKDKACFEGVEGGDFTGYVPVKPDFYKVIVEARKAAIGG

Sequences:

>Translated_302_residues
MFRKMVFSAVSVLAMATSMAHAADMKEFRVGILGGENETDRLRNYQCLADHLKAEFGFEKVSLFPAADYDGVIQGLLGGT
LDFAELGASGYASVYLKDPKAVTPILTTKQTDGSTGYYSIGLALKTSGITDIKSAKGKKLGYADPDSTSGYLIPLTQIPK
TTGASNEAFFASTQFNGGHENNILAVRDGKVDVAVDDSSGIGDFKNGFTSGTFHKVVAKGAVDPNDFVEVWRSGLIPNGP
LVVRTALGDQMTAKLAAFFTELPKKDKACFEGVEGGDFTGYVPVKPDFYKVIVEARKAAIGG
>Mature_302_residues
MFRKMVFSAVSVLAMATSMAHAADMKEFRVGILGGENETDRLRNYQCLADHLKAEFGFEKVSLFPAADYDGVIQGLLGGT
LDFAELGASGYASVYLKDPKAVTPILTTKQTDGSTGYYSIGLALKTSGITDIKSAKGKKLGYADPDSTSGYLIPLTQIPK
TTGASNEAFFASTQFNGGHENNILAVRDGKVDVAVDDSSGIGDFKNGFTSGTFHKVVAKGAVDPNDFVEVWRSGLIPNGP
LVVRTALGDQMTAKLAAFFTELPKKDKACFEGVEGGDFTGYVPVKPDFYKVIVEARKAAIGG

Specific function: Part of the binding-protein-dependent transport system for alkylphosphonates [H]

COG id: COG3221

COG function: function code P; ABC-type phosphate/phosphonate transport system, periplasmic component

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790543, Length=306, Percent_Identity=28.7581699346405, Blast_Score=95, Evalue=4e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017797
- InterPro:   IPR005770 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32087; Mature: 32087

Theoretical pI: Translated: 6.15; Mature: 6.15

Prosite motif: PS00290 IG_MHC

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFRKMVFSAVSVLAMATSMAHAADMKEFRVGILGGENETDRLRNYQCLADHLKAEFGFEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCE
VSLFPAADYDGVIQGLLGGTLDFAELGASGYASVYLKDPKAVTPILTTKQTDGSTGYYSI
EEEECCCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEE
GLALKTSGITDIKSAKGKKLGYADPDSTSGYLIPLTQIPKTTGASNEAFFASTQFNGGHE
EEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCC
NNILAVRDGKVDVAVDDSSGIGDFKNGFTSGTFHKVVAKGAVDPNDFVEVWRSGLIPNGP
CCEEEEECCEEEEEEECCCCCCHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
LVVRTALGDQMTAKLAAFFTELPKKDKACFEGVEGGDFTGYVPVKPDFYKVIVEARKAAI
EEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHC
GG
CC
>Mature Secondary Structure
MFRKMVFSAVSVLAMATSMAHAADMKEFRVGILGGENETDRLRNYQCLADHLKAEFGFEK
CHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCE
VSLFPAADYDGVIQGLLGGTLDFAELGASGYASVYLKDPKAVTPILTTKQTDGSTGYYSI
EEEECCCCHHHHHHHHHCCCCCHHHHCCCCCEEEEEECCCCCCCEEEECCCCCCCCEEEE
GLALKTSGITDIKSAKGKKLGYADPDSTSGYLIPLTQIPKTTGASNEAFFASTQFNGGHE
EEEEEECCCCHHHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEEECCCCCCC
NNILAVRDGKVDVAVDDSSGIGDFKNGFTSGTFHKVVAKGAVDPNDFVEVWRSGLIPNGP
CCEEEEECCEEEEEEECCCCCCHHHCCCCCCHHHHHHHCCCCCHHHHHHHHHHCCCCCCC
LVVRTALGDQMTAKLAAFFTELPKKDKACFEGVEGGDFTGYVPVKPDFYKVIVEARKAAI
EEEEECCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCEEEEECCCCHHHHHHHHHHHHHC
GG
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; 3-phospho-serine [Periplasm]; phosphite [Periplasm]; H2O; phosphate [Periplasm]; alkylphosphonate [Periplasm] [C]

Specific reaction: H2O + ATP + 3-phospho-serine [Periplasm] = ADP + phosphate + 3-phospho-serine [Cytoplasm] ATP + phosphite [Periplasm] + H2O = phosphite [Cytoplasm] + ADP + phosphate phosphate [Periplasm] + ATP + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] A

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]