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The map label for this gene is aglR [H]

Identifier: 13472885

GI number: 13472885

Start: 2673117

End: 2674169

Strand: Direct

Name: aglR [H]

Synonym: mlr3320

Alternate gene names: 13472885

Gene position: 2673117-2674169 (Clockwise)

Preceding gene: 13472877

Following gene: 13472892

Centisome position: 37.99

GC content: 64.96

Gene sequence:

>1053_bases
ATGGACAGACGGCATACGGAAAAGAACGCGGAAGCGTCGGCGCAAGGGCGGCCAACGCTGAAGACGCTTGCCTTCATGAC
CGGGCTCGGCGTCACCACCGTGTCGCGCGCCTTGAAGGATGCGCCTGAGATCGGCGCCGAAACCAGGCGCCGCGTCCAGC
TCGTCGCCAAGCAGATCGGCTACCGCCCGAACCGCGCCGGCGTCAGGCTCAGAACCGGCAAGACCAATGTCATCAGCCTC
GTGCTCAACACCGAGCAGGAGATCATGAGTTTCGTCTCCGACATCATCTACGGTGTCTCGGAGGTCATTGCCGACACGCC
CTACCATCTGATCGTCACGCCCTATTCGCGCTCGCAGGATCCGCTCGACCCGATACGCTACCTTGTCGAGACCGGCTCGG
CCGACGGCGTCATCATTTCACGCACGCAGCCGAACGATCCCCGGGCCCGCTACATGCTGGAGCGCGGCATTCCCTTTGCC
ACGCATGGCCGCACTGAGATGGGGCTGGTCCACCCCTATCATGATTTCGACAATCACGCCTTCGCGGTCGAAGCCGTCCG
GCGCCTTGCGAGCCTGGGACGCCGCAAGCTCGCTCTGCTGACGCCACCCGCCGGGCTGACCTATTACGGCCATACGGTCA
ACGGCTTTGCCGATGCGTTGAGCGAGGTCGGCGCCAGCGAGATCCCGTTCAGCACCGTATCGATCGACCATTCGATCGAA
CAGATCCGGACGAGGACCGCCCAGCTGATGCGCCGCGACATCAGGCCGGACGGCTTTGTCAGCAGCGCCGCCGCCGCCAC
CCTTGCGCTCGTCGCCGGCATCGAGGATGCCGGCCTCAAGCTTGGCCGCGACGTCGACATCGTCTCCAAGCAATCATCGG
ACCTTTTGCATCTGTTCCGGCCGGAACTGCTGATCGTCAACGAGAACTTCCGGCTGGCGGGCTCCGAACTCGCCCGCTCC
GTGCTCGGCTGGATCGGCGGCGCCGCACCCGGCTCGCTGCAAAGTCTCAGCGTGCCGGGCGAGGTCCTGGCCTACCAGCG
CTCCACGGACTAA

Upstream 100 bases:

>100_bases
GTATATTGACGAATTGCCGGGCTTGAAATCATGCCGCGCCGCCAATCATGGCGATTGCCGACCCGGCCTGCGGCTGCTAT
GCGCCTGACGGGCGGGACGA

Downstream 100 bases:

>100_bases
CCGGCGGCGCCGCTGCCCCACGGGCCGTGGAAGGCACCCTGCTCGTCGATGCGTTCGAAGCCATGCGCGCCGAAGAAGTC
GCGCTGTGCCTGGATCAGGT

Product: transcription regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 350; Mature: 350

Protein sequence:

>350_residues
MDRRHTEKNAEASAQGRPTLKTLAFMTGLGVTTVSRALKDAPEIGAETRRRVQLVAKQIGYRPNRAGVRLRTGKTNVISL
VLNTEQEIMSFVSDIIYGVSEVIADTPYHLIVTPYSRSQDPLDPIRYLVETGSADGVIISRTQPNDPRARYMLERGIPFA
THGRTEMGLVHPYHDFDNHAFAVEAVRRLASLGRRKLALLTPPAGLTYYGHTVNGFADALSEVGASEIPFSTVSIDHSIE
QIRTRTAQLMRRDIRPDGFVSSAAAATLALVAGIEDAGLKLGRDVDIVSKQSSDLLHLFRPELLIVNENFRLAGSELARS
VLGWIGGAAPGSLQSLSVPGEVLAYQRSTD

Sequences:

>Translated_350_residues
MDRRHTEKNAEASAQGRPTLKTLAFMTGLGVTTVSRALKDAPEIGAETRRRVQLVAKQIGYRPNRAGVRLRTGKTNVISL
VLNTEQEIMSFVSDIIYGVSEVIADTPYHLIVTPYSRSQDPLDPIRYLVETGSADGVIISRTQPNDPRARYMLERGIPFA
THGRTEMGLVHPYHDFDNHAFAVEAVRRLASLGRRKLALLTPPAGLTYYGHTVNGFADALSEVGASEIPFSTVSIDHSIE
QIRTRTAQLMRRDIRPDGFVSSAAAATLALVAGIEDAGLKLGRDVDIVSKQSSDLLHLFRPELLIVNENFRLAGSELARS
VLGWIGGAAPGSLQSLSVPGEVLAYQRSTD
>Mature_350_residues
MDRRHTEKNAEASAQGRPTLKTLAFMTGLGVTTVSRALKDAPEIGAETRRRVQLVAKQIGYRPNRAGVRLRTGKTNVISL
VLNTEQEIMSFVSDIIYGVSEVIADTPYHLIVTPYSRSQDPLDPIRYLVETGSADGVIISRTQPNDPRARYMLERGIPFA
THGRTEMGLVHPYHDFDNHAFAVEAVRRLASLGRRKLALLTPPAGLTYYGHTVNGFADALSEVGASEIPFSTVSIDHSIE
QIRTRTAQLMRRDIRPDGFVSSAAAATLALVAGIEDAGLKLGRDVDIVSKQSSDLLHLFRPELLIVNENFRLAGSELARS
VLGWIGGAAPGSLQSLSVPGEVLAYQRSTD

Specific function: Probable regulatory protein for the binding-protein- dependent transport system for alpha-glucosides such as sucrose, maltose and trehalose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH lacI-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI1790369, Length=318, Percent_Identity=22.9559748427673, Blast_Score=72, Evalue=4e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000843
- InterPro:   IPR010982
- InterPro:   IPR001761 [H]

Pfam domain/function: PF00356 LacI; PF00532 Peripla_BP_1 [H]

EC number: NA

Molecular weight: Translated: 38167; Mature: 38167

Theoretical pI: Translated: 9.17; Mature: 9.17

Prosite motif: PS50932 HTH_LACI_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRRHTEKNAEASAQGRPTLKTLAFMTGLGVTTVSRALKDAPEIGAETRRRVQLVAKQIG
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHC
YRPNRAGVRLRTGKTNVISLVLNTEQEIMSFVSDIIYGVSEVIADTPYHLIVTPYSRSQD
CCCCCCCEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
PLDPIRYLVETGSADGVIISRTQPNDPRARYMLERGIPFATHGRTEMGLVHPYHDFDNHA
CHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCEEECCCCCCCEECCCCCCCCCH
FAVEAVRRLASLGRRKLALLTPPAGLTYYGHTVNGFADALSEVGASEIPFSTVSIDHSIE
HHHHHHHHHHHCCCCEEEEECCCCCCEEECCCHHHHHHHHHHCCCCCCCCEEEEHHHHHH
QIRTRTAQLMRRDIRPDGFVSSAAAATLALVAGIEDAGLKLGRDVDIVSKQSSDLLHLFR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHHCCCCCHHHHHHC
PELLIVNENFRLAGSELARSVLGWIGGAAPGSLQSLSVPGEVLAYQRSTD
CCEEEECCCCEECHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEECCCC
>Mature Secondary Structure
MDRRHTEKNAEASAQGRPTLKTLAFMTGLGVTTVSRALKDAPEIGAETRRRVQLVAKQIG
CCCCCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHCCHHHHHHHHHHHHHHC
YRPNRAGVRLRTGKTNVISLVLNTEQEIMSFVSDIIYGVSEVIADTPYHLIVTPYSRSQD
CCCCCCCEEEECCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCC
PLDPIRYLVETGSADGVIISRTQPNDPRARYMLERGIPFATHGRTEMGLVHPYHDFDNHA
CHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHCCCEEECCCCCCCEECCCCCCCCCH
FAVEAVRRLASLGRRKLALLTPPAGLTYYGHTVNGFADALSEVGASEIPFSTVSIDHSIE
HHHHHHHHHHHCCCCEEEEECCCCCCEEECCCHHHHHHHHHHCCCCCCCCEEEEHHHHHH
QIRTRTAQLMRRDIRPDGFVSSAAAATLALVAGIEDAGLKLGRDVDIVSKQSSDLLHLFR
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCHHCCCCCCCCHHHCCCCCHHHHHHC
PELLIVNENFRLAGSELARSVLGWIGGAAPGSLQSLSVPGEVLAYQRSTD
CCEEEECCCCEECHHHHHHHHHHHHCCCCCCCCCCCCCCHHHEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10400573; 11481430 [H]