Click here to switch to the map view.

The map label for this gene is ugpA [C]

Identifier: 13472883

GI number: 13472883

Start: 2670492

End: 2671439

Strand: Reverse

Name: ugpA [C]

Synonym: mll3316

Alternate gene names: 13472883

Gene position: 2671439-2670492 (Counterclockwise)

Preceding gene: 13472884

Following gene: 13472882

Centisome position: 37.97

GC content: 59.28

Gene sequence:

>948_bases
GTGAACTCCAGGCCGGGAGGGCGCGCCCTTACCCGATCCAGCATGGCTGCACCGATGAGCAAGAGCGAACGCCCCAGCCG
ACTGTTTCGCAATCTCAATGCGAAGGTCGCGTCGATCCCCATGATCCTCACCGCGCTGGTGGTTTTCGTCGGCGGTACGG
CGTGGACGGTGCTCTATTCGTTCACCAATTCGAAGCTGTTGCCGCGGCTGAATTTCGTCGGCCTCGACCAGTATTACCGG
TTGTGGGCGACCCCGCGCTGGCTGATCTCGATCGAAAACCTGCTGATCTACGGCGTGATCTCGCTGGTTTTCTCGCTGGT
GATCGGTTTCGTCCTCGCTGCCCTGCTCGATCAGAAGATCCGTTTCGAGGACACGTTCCGCACGATCTTTCTCTATCCCT
TCGCGCTCTCCTTCATCGTCACCGGCCTTGTCTGGCAATGGCTGCTCAATCCGGATTTCGGCATCCAGGGCGTGATACGA
AAGCTTGGCTGGACGAGCTTCGCTTTCGATCCTCTCTACAATTCCAGCATCGTCATCTACGGCATATCGATCGCCGCGCT
CTGGCAGGGCACCGGGCTGATCATGTGCTTGATGCTGGCCGGCCTGCGCGGCATAGACGAGGATATCTGGAAGGCCGCGC
GGGTGGACGGGATTCCGATGTGGAAGACCTATCTGTTCATCATCATCCCGATGATGCGGCCGGTCTTCATCACCACGCTC
GTCATCATCGCGTCCGGCATCGTCAAGGTCTACGACCTTGTCGTCGCCCAGACCAGCGGCGGGCCGGGCATCGCCTCCGA
AGTGCCGGCAAAGTATGTCTACGACTACATGTTCTTCGCCCAGAATCTCGGCCAGGGTTTCGCAGCCTCGACCATGATGC
TGCTCTCGGTGATGATTGTCATCGTGCCGTGGGCCTATCTCGAATTCGGAGGCAGGAAGCGTGTCTGA

Upstream 100 bases:

>100_bases
CCAAGCCCGAGATGACCGTGGAAGAGGCGCAGAAGCGCTTCGCCGCCATCATCGCCACGGCTGACTGATACCGCCGGCAA
AGTCCCTTCCTCCCGGTCTG

Downstream 100 bases:

>100_bases
CCAAACCGTTTCCCTGTCCGCGCCGTCCGGCGTCGGCCATACGGATGCCTCGGGACCGAGCGGACCGAAGCCGCGTCACA
TATTCTCGCGCCGCAACATC

Product: permease of ABC sugar transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MNSRPGGRALTRSSMAAPMSKSERPSRLFRNLNAKVASIPMILTALVVFVGGTAWTVLYSFTNSKLLPRLNFVGLDQYYR
LWATPRWLISIENLLIYGVISLVFSLVIGFVLAALLDQKIRFEDTFRTIFLYPFALSFIVTGLVWQWLLNPDFGIQGVIR
KLGWTSFAFDPLYNSSIVIYGISIAALWQGTGLIMCLMLAGLRGIDEDIWKAARVDGIPMWKTYLFIIIPMMRPVFITTL
VIIASGIVKVYDLVVAQTSGGPGIASEVPAKYVYDYMFFAQNLGQGFAASTMMLLSVMIVIVPWAYLEFGGRKRV

Sequences:

>Translated_315_residues
MNSRPGGRALTRSSMAAPMSKSERPSRLFRNLNAKVASIPMILTALVVFVGGTAWTVLYSFTNSKLLPRLNFVGLDQYYR
LWATPRWLISIENLLIYGVISLVFSLVIGFVLAALLDQKIRFEDTFRTIFLYPFALSFIVTGLVWQWLLNPDFGIQGVIR
KLGWTSFAFDPLYNSSIVIYGISIAALWQGTGLIMCLMLAGLRGIDEDIWKAARVDGIPMWKTYLFIIIPMMRPVFITTL
VIIASGIVKVYDLVVAQTSGGPGIASEVPAKYVYDYMFFAQNLGQGFAASTMMLLSVMIVIVPWAYLEFGGRKRV
>Mature_315_residues
MNSRPGGRALTRSSMAAPMSKSERPSRLFRNLNAKVASIPMILTALVVFVGGTAWTVLYSFTNSKLLPRLNFVGLDQYYR
LWATPRWLISIENLLIYGVISLVFSLVIGFVLAALLDQKIRFEDTFRTIFLYPFALSFIVTGLVWQWLLNPDFGIQGVIR
KLGWTSFAFDPLYNSSIVIYGISIAALWQGTGLIMCLMLAGLRGIDEDIWKAARVDGIPMWKTYLFIIIPMMRPVFITTL
VIIASGIVKVYDLVVAQTSGGPGIASEVPAKYVYDYMFFAQNLGQGFAASTMMLLSVMIVIVPWAYLEFGGRKRV

Specific function: Probably part of a binding-protein-dependent transport system PH1214/15/16. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789861, Length=240, Percent_Identity=24.5833333333333, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 35233; Mature: 35233

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSRPGGRALTRSSMAAPMSKSERPSRLFRNLNAKVASIPMILTALVVFVGGTAWTVLYS
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
FTNSKLLPRLNFVGLDQYYRLWATPRWLISIENLLIYGVISLVFSLVIGFVLAALLDQKI
HHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFEDTFRTIFLYPFALSFIVTGLVWQWLLNPDFGIQGVIRKLGWTSFAFDPLYNSSIVIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEE
GISIAALWQGTGLIMCLMLAGLRGIDEDIWKAARVDGIPMWKTYLFIIIPMMRPVFITTL
EHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VIIASGIVKVYDLVVAQTSGGPGIASEVPAKYVYDYMFFAQNLGQGFAASTMMLLSVMIV
HHHHHHHHHHHHHHHEECCCCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IVPWAYLEFGGRKRV
HHHHHHHHCCCCCCC
>Mature Secondary Structure
MNSRPGGRALTRSSMAAPMSKSERPSRLFRNLNAKVASIPMILTALVVFVGGTAWTVLYS
CCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHH
FTNSKLLPRLNFVGLDQYYRLWATPRWLISIENLLIYGVISLVFSLVIGFVLAALLDQKI
HHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RFEDTFRTIFLYPFALSFIVTGLVWQWLLNPDFGIQGVIRKLGWTSFAFDPLYNSSIVIY
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCEEECCCCCCCEEEE
GISIAALWQGTGLIMCLMLAGLRGIDEDIWKAARVDGIPMWKTYLFIIIPMMRPVFITTL
EHHHHHHHCCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
VIIASGIVKVYDLVVAQTSGGPGIASEVPAKYVYDYMFFAQNLGQGFAASTMMLLSVMIV
HHHHHHHHHHHHHHHEECCCCCCCHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
IVPWAYLEFGGRKRV
HHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]