Click here to switch to the map view.

The map label for this gene is 13472880

Identifier: 13472880

GI number: 13472880

Start: 2667657

End: 2668403

Strand: Reverse

Name: 13472880

Synonym: mll3313

Alternate gene names: NA

Gene position: 2668403-2667657 (Counterclockwise)

Preceding gene: 13472881

Following gene: 13472879

Centisome position: 37.92

GC content: 62.78

Gene sequence:

>747_bases
ATGAACTGGTCATTCCAACTTTACAGCGCCCGCAATTTTCAACCCTGGGAGGGCGTGCTCGCGACGCTCGGCAAGCTCGG
CTACACCGAGGTTGAAGGCTTCGGTGGCGTCTATGAAAATCCCAAGGCCTTCCGCGCGGAACTCGACAAGAACGGGCTTT
CGATGCCGACCGGGCATTTCTCCATCGATGCGCTGGAGAAGGATTTCGACGGCGTGCGCAAAACGGCCGAAGCGCTCGGC
ATCAAGCTTCTGATCTGCCCCTATCTGATGGCAGAGGACAGGCCGTCCGACGCCACCGGCTGGCGCGGCTTTGGCGAGCG
CCTGGCCAAGGTCGGCGAGGTCGCCTCGAAGGCCGGCTACGGCTTTGCCTGGCACAACCATGATTTCGAGTTCAAGGCAC
TCGCCGACGGGTCGGTGCCGCAAGATCACATCCTGTCTTCGGCGCCCGATATCGGCTGGGAGATGGACCTCGCCTGGGTG
GTGCGCGGCGGCGCCGATCCGCTGCCCTGGATCGAGAAGCACGGCAAACGCATCGTCGCCGTCCACGTCAAGGACATCGC
CAGGCCGGGCGAAGGGCTGGACGAGGATGGCTGGTCGGATGTCGGCCACGGCACGATCGACTGGGCCAACCTGATCAAGG
TGTTGCGGGCCAAGAGCGCGGCAAATTACTTTGTCATGGAACAGGACAACCCCAACGACATCGAGCGCTTCGCCCGCCGC
TCGATCGCATCCGTCAAGGCTTACTAG

Upstream 100 bases:

>100_bases
AGCTCGCGCCTCGCTGTTCGACACCCCATCCGGCAACCGCCTATAGCTCCCAGGCCCTCCTCCCAAGAACCCACCCTACC
AAGCAGAACGGACAGAGACG

Downstream 100 bases:

>100_bases
GAACAATCATCATGGCAAAGAAACTGGGTATTGGCGTCATCGGCTGCGGCAACATCTCGAAGGCGTATTTCTCGCTGGCG
CCGCTGTTTCGCGGCATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Xylose Isomerase Domain-Containing Protein; Sugar Phosphate Isomerase/Epimerase; Twin-Arginine Translocation Pathway Signal; Xylose Isomerase DomaiN-Containing Protein Tim Barrel; Xylose Isomerase Domain-Containing Protein TIM Barrel; Xylose Isomerase-Like Protein; Xylose Isomerase Family Protein; Myo-Inosose-2 Dehydratase; Xylose Isomerase Domain Protein; Xylose Isomerase-Like; Xylose Isomerase-Like TIM Barrel; AP Endonuclease Family 2 Superfamily; Sugar Phosphate Isomerase / Epimerase; Sugar Phosphate Isomerases/Epimerases; Xlose Isomerase Domain-Containing Protein; Xylose Isomerase Domain-Containing Protein Tim Barrel

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MNWSFQLYSARNFQPWEGVLATLGKLGYTEVEGFGGVYENPKAFRAELDKNGLSMPTGHFSIDALEKDFDGVRKTAEALG
IKLLICPYLMAEDRPSDATGWRGFGERLAKVGEVASKAGYGFAWHNHDFEFKALADGSVPQDHILSSAPDIGWEMDLAWV
VRGGADPLPWIEKHGKRIVAVHVKDIARPGEGLDEDGWSDVGHGTIDWANLIKVLRAKSAANYFVMEQDNPNDIERFARR
SIASVKAY

Sequences:

>Translated_248_residues
MNWSFQLYSARNFQPWEGVLATLGKLGYTEVEGFGGVYENPKAFRAELDKNGLSMPTGHFSIDALEKDFDGVRKTAEALG
IKLLICPYLMAEDRPSDATGWRGFGERLAKVGEVASKAGYGFAWHNHDFEFKALADGSVPQDHILSSAPDIGWEMDLAWV
VRGGADPLPWIEKHGKRIVAVHVKDIARPGEGLDEDGWSDVGHGTIDWANLIKVLRAKSAANYFVMEQDNPNDIERFARR
SIASVKAY
>Mature_248_residues
MNWSFQLYSARNFQPWEGVLATLGKLGYTEVEGFGGVYENPKAFRAELDKNGLSMPTGHFSIDALEKDFDGVRKTAEALG
IKLLICPYLMAEDRPSDATGWRGFGERLAKVGEVASKAGYGFAWHNHDFEFKALADGSVPQDHILSSAPDIGWEMDLAWV
VRGGADPLPWIEKHGKRIVAVHVKDIARPGEGLDEDGWSDVGHGTIDWANLIKVLRAKSAANYFVMEQDNPNDIERFARR
SIASVKAY

Specific function: Unknown

COG id: COG1082

COG function: function code G; Sugar phosphate isomerases/epimerases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27499; Mature: 27499

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWSFQLYSARNFQPWEGVLATLGKLGYTEVEGFGGVYENPKAFRAELDKNGLSMPTGHF
CCCCEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCE
SIDALEKDFDGVRKTAEALGIKLLICPYLMAEDRPSDATGWRGFGERLAKVGEVASKAGY
EHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GFAWHNHDFEFKALADGSVPQDHILSSAPDIGWEMDLAWVVRGGADPLPWIEKHGKRIVA
CEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHCCCEEEE
VHVKDIARPGEGLDEDGWSDVGHGTIDWANLIKVLRAKSAANYFVMEQDNPNDIERFARR
EEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
SIASVKAY
HHHHHCCC
>Mature Secondary Structure
MNWSFQLYSARNFQPWEGVLATLGKLGYTEVEGFGGVYENPKAFRAELDKNGLSMPTGHF
CCCCEEEEECCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCHHHHHHHCCCCCCCCCCCE
SIDALEKDFDGVRKTAEALGIKLLICPYLMAEDRPSDATGWRGFGERLAKVGEVASKAGY
EHHHHHHHHHHHHHHHHHHCCHHEEHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GFAWHNHDFEFKALADGSVPQDHILSSAPDIGWEMDLAWVVRGGADPLPWIEKHGKRIVA
CEEECCCCCEEEEECCCCCCHHHHHHCCCCCCCEEEEEEEEECCCCCCCHHHHCCCEEEE
VHVKDIARPGEGLDEDGWSDVGHGTIDWANLIKVLRAKSAANYFVMEQDNPNDIERFARR
EEEHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHH
SIASVKAY
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA