| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is blaSE [H]
Identifier: 13472876
GI number: 13472876
Start: 2662643
End: 2663737
Strand: Reverse
Name: blaSE [H]
Synonym: mll3306
Alternate gene names: 13472876
Gene position: 2663737-2662643 (Counterclockwise)
Preceding gene: 13472878
Following gene: 13472875
Centisome position: 37.86
GC content: 61.19
Gene sequence:
>1095_bases ATGACAAAACTGACAAATGCTATCTTTGCGTCCGCATTGCTTTCCACCGCAATGTGGACGGCCCCGGTTTTCGCCGCCGA CCCTGGTTCCGCCAGTGCCGGCAATGGCGAAAGCATGCGGGACGTTACTTCAGGCGACTTCAAGGCCGGTCGGGCAAAAC CGATCACGACTCCAGAGCTTACTGATGAAGACAGCCGCGCCGCGCCGCTCACCGACGAGAAGGCGGCTGTCAAATCCTAT GGCATCGTCGGGCGTTCCGCCGATGGCAAGGAGATCAAGATCGAACCAAGCGAAGCGCTGCGCGAGCTCATCATCAAGGA ACTGAACGCGCCGGCCAATGGCGCCGACGGGGCTGAGCGCAAGACCGAGGACCCCGGGCTCGGCGAAGGCGAGGCCGGGC GCCAGGTTTTCGGCCCCGACGATCGCGAGCAGGTCAGGAACACCAAGACCTATCCGTTCTCGGCCATCGGCTATCTGGAA GCCAAATCGGCGAAGACGGGCAGCTATGGCAGCTGTTCTGCAACGCTGATCGGCCCGCGCACGGTGCTCACCGCGGCGCA TTGCCTCTACAGCCATGAGGACAAGGACTGGCTCTCCGAGTATCTGTTCGTGCCAGGCCTCAACGGCAGCACTGCCGACG ACGCACCATTCGGTGCCTTCACCTATGAAAGCGCCTATGTGCTGCAAGGCTTCATCGACAACTACCAGGGCTATTACGGC TCGGTGATCCCGTGGGATCTTGGCATCATCACGCTGAAGCAGGATGTCGGCACCAACCTCGGCTGGCTGGGCTACGCCAA TTATGACGACCTCGGCGACTTCACCGCCAACCTCGTCGGCTATCCCGGGGACAAGCCGATGGGCACGATGTGGAAGGCCA GCTGCGAAGTGCATGCCGAGAACATCGCCCCGGAATATTTCCAGTATGATTGCGATACGTTCCCGGGGTCGAGCGGCAGC TCGGTCTATGCCTATGACACCAAGTCCAAGCAGCGCATCATCACCGGCGTCAACGTCGCGGAAAGCCCCGACGCGAACAC CGCCGTGCGCCTGAACGCGGCCAACGTCCAGTGGATCAACAGCCTGTACAAATAG
Upstream 100 bases:
>100_bases GGAATGCCAGCGAGCAGACTCATTTTTCGGCGTCACCACGATCTCGACAATATTTCTCTATTTTGATCCAGTCCTTGCTG ACTTTTGGGAGAGTCTCACC
Downstream 100 bases:
>100_bases GCGCTGCGCGTTCGCGGTGAAGGCAAAGGCGGTGGGTCAATCCCGCCGCCTTTTTCGTGCCGATCCTTCCCTCATGGCTT CCCTTGCGCGAGGCCGGCGC
Product: glutamyl endopeptidase
Products: NA
Alternate protein names: Glutamate-specific endopeptidase; GSE [H]
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MTKLTNAIFASALLSTAMWTAPVFAADPGSASAGNGESMRDVTSGDFKAGRAKPITTPELTDEDSRAAPLTDEKAAVKSY GIVGRSADGKEIKIEPSEALRELIIKELNAPANGADGAERKTEDPGLGEGEAGRQVFGPDDREQVRNTKTYPFSAIGYLE AKSAKTGSYGSCSATLIGPRTVLTAAHCLYSHEDKDWLSEYLFVPGLNGSTADDAPFGAFTYESAYVLQGFIDNYQGYYG SVIPWDLGIITLKQDVGTNLGWLGYANYDDLGDFTANLVGYPGDKPMGTMWKASCEVHAENIAPEYFQYDCDTFPGSSGS SVYAYDTKSKQRIITGVNVAESPDANTAVRLNAANVQWINSLYK
Sequences:
>Translated_364_residues MTKLTNAIFASALLSTAMWTAPVFAADPGSASAGNGESMRDVTSGDFKAGRAKPITTPELTDEDSRAAPLTDEKAAVKSY GIVGRSADGKEIKIEPSEALRELIIKELNAPANGADGAERKTEDPGLGEGEAGRQVFGPDDREQVRNTKTYPFSAIGYLE AKSAKTGSYGSCSATLIGPRTVLTAAHCLYSHEDKDWLSEYLFVPGLNGSTADDAPFGAFTYESAYVLQGFIDNYQGYYG SVIPWDLGIITLKQDVGTNLGWLGYANYDDLGDFTANLVGYPGDKPMGTMWKASCEVHAENIAPEYFQYDCDTFPGSSGS SVYAYDTKSKQRIITGVNVAESPDANTAVRLNAANVQWINSLYK >Mature_363_residues TKLTNAIFASALLSTAMWTAPVFAADPGSASAGNGESMRDVTSGDFKAGRAKPITTPELTDEDSRAAPLTDEKAAVKSYG IVGRSADGKEIKIEPSEALRELIIKELNAPANGADGAERKTEDPGLGEGEAGRQVFGPDDREQVRNTKTYPFSAIGYLEA KSAKTGSYGSCSATLIGPRTVLTAAHCLYSHEDKDWLSEYLFVPGLNGSTADDAPFGAFTYESAYVLQGFIDNYQGYYGS VIPWDLGIITLKQDVGTNLGWLGYANYDDLGDFTANLVGYPGDKPMGTMWKASCEVHAENIAPEYFQYDCDTFPGSSGSS VYAYDTKSKQRIITGVNVAESPDANTAVRLNAANVQWINSLYK
Specific function: Specific for hydrolysis of peptide bonds on the carboxyl side of acidic amino acid residues, with a strong preference for Glu [H]
COG id: COG3591
COG function: function code E; V8-like Glu-specific endopeptidase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S1B family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR009003 - InterPro: IPR000126 - InterPro: IPR001254 - InterPro: IPR008256 [H]
Pfam domain/function: PF00089 Trypsin [H]
EC number: =3.4.21.19 [H]
Molecular weight: Translated: 39034; Mature: 38903
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: PS00134 TRYPSIN_HIS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLTNAIFASALLSTAMWTAPVFAADPGSASAGNGESMRDVTSGDFKAGRAKPITTPEL CCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC TDEDSRAAPLTDEKAAVKSYGIVGRSADGKEIKIEPSEALRELIIKELNAPANGADGAER CCCCCCCCCCCCHHHHHHHHCCEECCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCC KTEDPGLGEGEAGRQVFGPDDREQVRNTKTYPFSAIGYLEAKSAKTGSYGSCSATLIGPR CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCH TVLTAAHCLYSHEDKDWLSEYLFVPGLNGSTADDAPFGAFTYESAYVLQGFIDNYQGYYG HHHHHHHHHHCCCCHHHHHHHEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCC SVIPWDLGIITLKQDVGTNLGWLGYANYDDLGDFTANLVGYPGDKPMGTMWKASCEVHAE CCCEECCEEEEEEHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCEEECCEEEEHH NIAPEYFQYDCDTFPGSSGSSVYAYDTKSKQRIITGVNVAESPDANTAVRLNAANVQWIN HCCHHHHEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHH SLYK HHCC >Mature Secondary Structure TKLTNAIFASALLSTAMWTAPVFAADPGSASAGNGESMRDVTSGDFKAGRAKPITTPEL CCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCHHHCCCCCCCCCCCCCCCCCCC TDEDSRAAPLTDEKAAVKSYGIVGRSADGKEIKIEPSEALRELIIKELNAPANGADGAER CCCCCCCCCCCCHHHHHHHHCCEECCCCCCEEEECHHHHHHHHHHHHHCCCCCCCCCCCC KTEDPGLGEGEAGRQVFGPDDREQVRNTKTYPFSAIGYLEAKSAKTGSYGSCSATLIGPR CCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEEECCCCCCCCCCCEEEEECCH TVLTAAHCLYSHEDKDWLSEYLFVPGLNGSTADDAPFGAFTYESAYVLQGFIDNYQGYYG HHHHHHHHHHCCCCHHHHHHHEECCCCCCCCCCCCCCCEEECCHHHHHHHHHHHCCCCCC SVIPWDLGIITLKQDVGTNLGWLGYANYDDLGDFTANLVGYPGDKPMGTMWKASCEVHAE CCCEECCEEEEEEHHHCCCCCEEEECCCCCHHHHHHHHCCCCCCCCCCCEEECCEEEEHH NIAPEYFQYDCDTFPGSSGSSVYAYDTKSKQRIITGVNVAESPDANTAVRLNAANVQWIN HCCHHHHEECCCCCCCCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEECCCHHHHH SLYK HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1429718; 1346764 [H]