| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472870
Identifier: 13472870
GI number: 13472870
Start: 2652318
End: 2654561
Strand: Direct
Name: 13472870
Synonym: mlr3300
Alternate gene names: NA
Gene position: 2652318-2654561 (Clockwise)
Preceding gene: 13472868
Following gene: 13472871
Centisome position: 37.7
GC content: 65.64
Gene sequence:
>2244_bases GTGGTTTCGCTTGGGAAATTCGATCGGGCTTGGGGAAGCAATATGATCAAATTGACACGCCGGACGCTGCTTGTCGGCAC GTCCGCGCTCGTGGCGGCCGGTACGGTATCGTTCCGGGCGATGGCGGCATCGCGCACCTATCACGCGCTGCTGGTCGCCT GCACCGAATATCCTGCCCTGCCGCAAAGGAACTGGCTGATCGGGCCGAAGAACGATGCCGGCCTGGTGCACGAGTATCTG CTGAAGAACGTGCCCGACCCGGTGCGCTTCGCGCCCGAAAACGTCACGCTACTTGCCAAGGACGTGCCCGGCGCCAAAGG CTTGCCGACCCATGCGGCGATCAAGGCGGCGCTCGCCGATCTGGCGGCCAAGGTTCAGCGCGACGACTTCGTCTACCTGC ATCTGTCCGGCCACGGCGCCCAGCAGCCCGAAAGGGCCAAGGGCGACGAGACCGACGGGCTCGACGAGATTTTCCTGCCC GTCGACATCGAGAAATGGATAAACCGCGATGCCGGCGTGCCGAACGCGCTGGTCGACAATGAGATCGGCGATGCGCTCGA CGCGATCCGCAACAAGGGCGCCTTCGTCTGGGCTGTCTTCGACTGCTGCCATTCCGGCACCGCGACCCGCGCCGTCGAGG TTGACGACGAGTTGGAGCGCAAGGTCGAATTCGCCGACCTGGTAGGCGGCGACGAGGCTGCAAGGGCGGCGGCCATCAAG ACTTACGAGGACACGGTCGCAGGCGCCTCGCGCGGCCTCGACGAGAATGGCGCGCGCAAGCCCGCCTTCAACCTGACGCC GACCGGCGGCGAACCGATCACCAAGGGCAAGCTGGTCGCCTTCTACGCGGCCCAGACGGTGGAAACGACGCCGGAGATGC CGCTGCCCAAGGGCACTGCGGATGCGCCGCGCTTCGGCCTGTTCACCTTCACCATCCTGTCGAAGCTCGCCGAAAACCCC AATGTTACCTATCGCCAGCTTGGCCAGGCCGTGCTGCAGCAATATTCGGCCGACAGCCGCACCCGTCCGACGCCGCTGTT CGAGGGCGAGCTCGACGCGCGCGTCTTCGGCACCGACAAGACCGACGCCGTCATGCAGTGGCCTATCATCGTCAAGGACG GCCAGGCGACGATCGGCGCCGGCCTGCTGCATCGCCTTACGCCCGGCAGCAAGCTCGCCATCCTGCCGTCCGCGCTGTCG TCGCTGTCCGACGCGGTCGGCTATCTCGAGGTGGAGTCGGCCAAGAACCTGGAAAGCCGCGTCAAGCCGGTCGAGTTCGA GAAGAAGCCGGCACTCAAACTGGCCGACATTCCCGCCAACGCCTATGCGCGGGTGGCTGAGATCGCCGTCGACTACAGAC TCACGGTCGCTCGGCCGGCCGAGACGAAGGGACTCGAGAAAGAAACCGAACTGGTCAATTCGGTTCTCGACGAACTGGCC ACGGCCAAGGAAACCGGCTTCAACATCGAATTGGTCGACCCGGGCAAGAGCGCCGAGCTACGCTTCGCCGTGATGTGCGA GAATGCCATAGCGGGCGCGGCCAAGGATGCCAGCGACAAGCCGGCGCTGTGGTTCCTGCCGGCTTCGGGCGACGTGACGC TGAAGGACGGCAGCAAGCCGCCGCTGATCATCATCCACCCAGACGATCGCCAGAAGCTGGTCGACCCCACGACCAGGAAT TTGCGCACCATTTTCCGCGCCACCGGGCTGTCGCGGCTGGCGGCGGCCTCCGACTACAAACCCGAGGATGTCGACGTCCA GTTCCAGGTCAAGCGTCGCGACAAGGATGGGCTCGAACCCTTGCAGGCTTCCGCGGTGCCGCGCGTCTCGCCGGGCGACG AGGTGCATGTGCTGGCCAAGAACAGCTCGGACCAGCTGGTCGACATCAACGTGCTCTATGTCGGCAGCGACTATTCGATC ACCCACATCGTCGCCGAACGCCTGGCGCCGCAGGCCACGCTGGAGGAAGGGCTGCTCGCCTTCACCGACACCAGCTTCGG CATGGAGCGGATGATCGCGGTGCTGACCGAGGCGCCGCCGGAAAGCGAGAAGGAAGATCTGAGCTTCCTGGCGCAGGACG GCGTCGCGGCGATGACGCGCGGCCTCGGCCCCGCCAGCTTCTCCGACATGCTCGCCGATATCGGCATGGCGGCGCCGACC CGTTCGGTGATGCGGCTTGCCGACAAGAGCGGCCCGAAGGGGGCAGTAATGATCTTCCCGATGGAGACGGTGCCGCGCGC CTGA
Upstream 100 bases:
>100_bases GTTGTTGTCCCGGACCCATCGATAACGTGCCGGCGCATTTGATGACGGCAGGCTTGATGGCACGGCGACATTCAAAATAC TGACAAAATCCTCGACGAGG
Downstream 100 bases:
>100_bases GTTCCGCCCCAAGGCCGCACGGCCTGGTATCGCCGGCTCTTGCGCGATTGGCGCGATATGAGAACATCCCGCCGCGGCCA AGGGCTCAGCGGCTGACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 747; Mature: 747
Protein sequence:
>747_residues MVSLGKFDRAWGSNMIKLTRRTLLVGTSALVAAGTVSFRAMAASRTYHALLVACTEYPALPQRNWLIGPKNDAGLVHEYL LKNVPDPVRFAPENVTLLAKDVPGAKGLPTHAAIKAALADLAAKVQRDDFVYLHLSGHGAQQPERAKGDETDGLDEIFLP VDIEKWINRDAGVPNALVDNEIGDALDAIRNKGAFVWAVFDCCHSGTATRAVEVDDELERKVEFADLVGGDEAARAAAIK TYEDTVAGASRGLDENGARKPAFNLTPTGGEPITKGKLVAFYAAQTVETTPEMPLPKGTADAPRFGLFTFTILSKLAENP NVTYRQLGQAVLQQYSADSRTRPTPLFEGELDARVFGTDKTDAVMQWPIIVKDGQATIGAGLLHRLTPGSKLAILPSALS SLSDAVGYLEVESAKNLESRVKPVEFEKKPALKLADIPANAYARVAEIAVDYRLTVARPAETKGLEKETELVNSVLDELA TAKETGFNIELVDPGKSAELRFAVMCENAIAGAAKDASDKPALWFLPASGDVTLKDGSKPPLIIIHPDDRQKLVDPTTRN LRTIFRATGLSRLAAASDYKPEDVDVQFQVKRRDKDGLEPLQASAVPRVSPGDEVHVLAKNSSDQLVDINVLYVGSDYSI THIVAERLAPQATLEEGLLAFTDTSFGMERMIAVLTEAPPESEKEDLSFLAQDGVAAMTRGLGPASFSDMLADIGMAAPT RSVMRLADKSGPKGAVMIFPMETVPRA
Sequences:
>Translated_747_residues MVSLGKFDRAWGSNMIKLTRRTLLVGTSALVAAGTVSFRAMAASRTYHALLVACTEYPALPQRNWLIGPKNDAGLVHEYL LKNVPDPVRFAPENVTLLAKDVPGAKGLPTHAAIKAALADLAAKVQRDDFVYLHLSGHGAQQPERAKGDETDGLDEIFLP VDIEKWINRDAGVPNALVDNEIGDALDAIRNKGAFVWAVFDCCHSGTATRAVEVDDELERKVEFADLVGGDEAARAAAIK TYEDTVAGASRGLDENGARKPAFNLTPTGGEPITKGKLVAFYAAQTVETTPEMPLPKGTADAPRFGLFTFTILSKLAENP NVTYRQLGQAVLQQYSADSRTRPTPLFEGELDARVFGTDKTDAVMQWPIIVKDGQATIGAGLLHRLTPGSKLAILPSALS SLSDAVGYLEVESAKNLESRVKPVEFEKKPALKLADIPANAYARVAEIAVDYRLTVARPAETKGLEKETELVNSVLDELA TAKETGFNIELVDPGKSAELRFAVMCENAIAGAAKDASDKPALWFLPASGDVTLKDGSKPPLIIIHPDDRQKLVDPTTRN LRTIFRATGLSRLAAASDYKPEDVDVQFQVKRRDKDGLEPLQASAVPRVSPGDEVHVLAKNSSDQLVDINVLYVGSDYSI THIVAERLAPQATLEEGLLAFTDTSFGMERMIAVLTEAPPESEKEDLSFLAQDGVAAMTRGLGPASFSDMLADIGMAAPT RSVMRLADKSGPKGAVMIFPMETVPRA >Mature_747_residues MVSLGKFDRAWGSNMIKLTRRTLLVGTSALVAAGTVSFRAMAASRTYHALLVACTEYPALPQRNWLIGPKNDAGLVHEYL LKNVPDPVRFAPENVTLLAKDVPGAKGLPTHAAIKAALADLAAKVQRDDFVYLHLSGHGAQQPERAKGDETDGLDEIFLP VDIEKWINRDAGVPNALVDNEIGDALDAIRNKGAFVWAVFDCCHSGTATRAVEVDDELERKVEFADLVGGDEAARAAAIK TYEDTVAGASRGLDENGARKPAFNLTPTGGEPITKGKLVAFYAAQTVETTPEMPLPKGTADAPRFGLFTFTILSKLAENP NVTYRQLGQAVLQQYSADSRTRPTPLFEGELDARVFGTDKTDAVMQWPIIVKDGQATIGAGLLHRLTPGSKLAILPSALS SLSDAVGYLEVESAKNLESRVKPVEFEKKPALKLADIPANAYARVAEIAVDYRLTVARPAETKGLEKETELVNSVLDELA TAKETGFNIELVDPGKSAELRFAVMCENAIAGAAKDASDKPALWFLPASGDVTLKDGSKPPLIIIHPDDRQKLVDPTTRN LRTIFRATGLSRLAAASDYKPEDVDVQFQVKRRDKDGLEPLQASAVPRVSPGDEVHVLAKNSSDQLVDINVLYVGSDYSI THIVAERLAPQATLEEGLLAFTDTSFGMERMIAVLTEAPPESEKEDLSFLAQDGVAAMTRGLGPASFSDMLADIGMAAPT RSVMRLADKSGPKGAVMIFPMETVPRA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 80329; Mature: 80329
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVSLGKFDRAWGSNMIKLTRRTLLVGTSALVAAGTVSFRAMAASRTYHALLVACTEYPAL CCCCCCCHHHHCCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCC PQRNWLIGPKNDAGLVHEYLLKNVPDPVRFAPENVTLLAKDVPGAKGLPTHAAIKAALAD CCCCEECCCCCCHHHHHHHHHHCCCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHH LAAKVQRDDFVYLHLSGHGAQQPERAKGDETDGLDEIFLPVDIEKWINRDAGVPNALVDN HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCHHHCC EIGDALDAIRNKGAFVWAVFDCCHSGTATRAVEVDDELERKVEFADLVGGDEAARAAAIK HHHHHHHHHHCCCCEEEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHH TYEDTVAGASRGLDENGARKPAFNLTPTGGEPITKGKLVAFYAAQTVETTPEMPLPKGTA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCC DAPRFGLFTFTILSKLAENPNVTYRQLGQAVLQQYSADSRTRPTPLFEGELDARVFGTDK CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCC TDAVMQWPIIVKDGQATIGAGLLHRLTPGSKLAILPSALSSLSDAVGYLEVESAKNLESR CCCEEECCEEEECCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCEEEECCHHCHHHH VKPVEFEKKPALKLADIPANAYARVAEIAVDYRLTVARPAETKGLEKETELVNSVLDELA CCCCCCCCCCCCEEECCCCHHHHHHHHHHEEEEEEEECCCHHCCCCHHHHHHHHHHHHHH TAKETGFNIELVDPGKSAELRFAVMCENAIAGAAKDASDKPALWFLPASGDVTLKDGSKP HHHHCCCEEEEECCCCCCCEEEEEEECCHHCCCCCCCCCCCEEEEEECCCCEEEECCCCC PLIIIHPDDRQKLVDPTTRNLRTIFRATGLSRLAAASDYKPEDVDVQFQVKRRDKDGLEP CEEEECCCCCCHHCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC LQASAVPRVSPGDEVHVLAKNSSDQLVDINVLYVGSDYSITHIVAERLAPQATLEEGLLA HHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHCCHHHHHCCCEE FTDTSFGMERMIAVLTEAPPESEKEDLSFLAQDGVAAMTRGLGPASFSDMLADIGMAAPT EECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCH RSVMRLADKSGPKGAVMIFPMETVPRA HHHHHHHHCCCCCCEEEEEEHHCCCCC >Mature Secondary Structure MVSLGKFDRAWGSNMIKLTRRTLLVGTSALVAAGTVSFRAMAASRTYHALLVACTEYPAL CCCCCCCHHHHCCCHHHHHHHHHEECCHHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCC PQRNWLIGPKNDAGLVHEYLLKNVPDPVRFAPENVTLLAKDVPGAKGLPTHAAIKAALAD CCCCEECCCCCCHHHHHHHHHHCCCCCCEECCCCEEEEEECCCCCCCCCHHHHHHHHHHH LAAKVQRDDFVYLHLSGHGAQQPERAKGDETDGLDEIFLPVDIEKWINRDAGVPNALVDN HHHHHCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCEEEEEEHHHHCCCCCCCCCHHHCC EIGDALDAIRNKGAFVWAVFDCCHSGTATRAVEVDDELERKVEFADLVGGDEAARAAAIK HHHHHHHHHHCCCCEEEEEEHHHCCCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHH TYEDTVAGASRGLDENGARKPAFNLTPTGGEPITKGKLVAFYAAQTVETTPEMPLPKGTA HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHCCCCCCCCCCCCC DAPRFGLFTFTILSKLAENPNVTYRQLGQAVLQQYSADSRTRPTPLFEGELDARVFGTDK CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEECCCC TDAVMQWPIIVKDGQATIGAGLLHRLTPGSKLAILPSALSSLSDAVGYLEVESAKNLESR CCCEEECCEEEECCCCHHHHHHHHHCCCCCEEEEHHHHHHHHHHHHCEEEECCHHCHHHH VKPVEFEKKPALKLADIPANAYARVAEIAVDYRLTVARPAETKGLEKETELVNSVLDELA CCCCCCCCCCCCEEECCCCHHHHHHHHHHEEEEEEEECCCHHCCCCHHHHHHHHHHHHHH TAKETGFNIELVDPGKSAELRFAVMCENAIAGAAKDASDKPALWFLPASGDVTLKDGSKP HHHHCCCEEEEECCCCCCCEEEEEEECCHHCCCCCCCCCCCEEEEEECCCCEEEECCCCC PLIIIHPDDRQKLVDPTTRNLRTIFRATGLSRLAAASDYKPEDVDVQFQVKRRDKDGLEP CEEEECCCCCCHHCCCCHHHHHHHHHHHCHHHHHHCCCCCCCCCCEEEEEEECCCCCCCC LQASAVPRVSPGDEVHVLAKNSSDQLVDINVLYVGSDYSITHIVAERLAPQATLEEGLLA HHHCCCCCCCCCCCEEEEEECCCCCEEEEEEEEECCCCCHHHHHHHHHCCHHHHHCCCEE FTDTSFGMERMIAVLTEAPPESEKEDLSFLAQDGVAAMTRGLGPASFSDMLADIGMAAPT EECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCHHHHHHCCCCCHHHHHHHHHCCCCCH RSVMRLADKSGPKGAVMIFPMETVPRA HHHHHHHHCCCCCCEEEEEEHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA