| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472851
Identifier: 13472851
GI number: 13472851
Start: 2624367
End: 2625752
Strand: Direct
Name: 13472851
Synonym: mlr3274
Alternate gene names: NA
Gene position: 2624367-2625752 (Clockwise)
Preceding gene: 13472850
Following gene: 13472853
Centisome position: 37.3
GC content: 63.13
Gene sequence:
>1386_bases ATGACCGCCGTCTCTGACCCAACCCCTACGCCTCCGGCGGAAATTCTGGCTGTGCTGTCGCTGCTCTGCCCGGAAGTCGT GCGTGACATCGAGCAGAACTGGAATGCACCGGTTTCCGACTACGCCCGCCATCTGTGGCGGCCGGTGGCAAGGCCTGCAT CGGGCCCGGCGATCGCTGCCCGCTCGATCCTACGCGAAGTCCTGCATCAGCGCCTTGGCGCGATCATGCAGCCTGAAGAG ATCGGCAAGGCCCTCGAAGAGTTCGAGCACAGACCAGTGATTCAGTCCGGCCTGCACTGCCTGCTACTGATGGACCGGAT CACCTTCGATGCCCTCCTACTCGCTTGGCTGGGCGCGGTCGAAAACGGGCTGTCGGCCTTCTTCGGCTTCATGGGAACGA CGATGACCATGGAGACAATTGGCCGGGAGGGGCCGGGATGGCTCGATGTGGGCGACGACAAGGTCAACCTGTTCGGCATG GGGCGCCACAAGCTCTGCCGCAAAAGCGCCTGCGTGGCCGGTCCCGTCACCCTCAACAAGCGCGCGCTCCAAGCGGTGGG CGACGAAACGGATGCCAGCCGCTGGCTGGGCACGCTGCTTGCCAGCCAGGACAAGGTGTTTGGAACCGCCGCCGATGCGC TGACAGCCCTCAACGAGGACCTGGTCGCTGATTGGGATCGTTCCGGCATGGCCCTGCCGGTTTTCATCGATGATCGGCTC GCCGCTTCTGCCGTGGCGCGGCATCTGGAATATGACGGCAGCCTTCTTTCCAGGCTGCTTATTGAGCCCGCAAGACGCCA GCGTCTCGAACATGCCTTGCAAGACGCCGCATCGAGCCCATTTGGCCGATTCCTGCCCAATACCACGGCCTATTTCTGGG GCATCCGCGAGGAGCGCGTGCGCAAGCTCGTCCTCGATAACGGGCACCTGATCGAGCCTGACAGGCCGCATGGTTTTTCC GTCCCGTTCGAGCGGTCGCATCTCAAGCAGGCGCTGCTGGACGGCGTGCTGCTGCCGAACTTGTTCCTGACGTTCCTCGT CCTTGCCATATTGCCGCGCGTGCGGGTTGCGGGCGGCCTGAGGCAGATTGGCTATGTAGCGCTTTTCCACTCGATCCTGC TGGCTGCGCTAGACGAAAACGCGCCGGAAGAGCGCGATCTGGCTGCGGAGCTGCAGGTTCGGGAAAATGCCTGGGGCATG CGCGTCATCGATGAAAAGATCTCGGTCCGCGAGCAGCTTGCAGGCCTGCCGGAAGGAGCGCTCTTCCCAGACCTGCTCCG GCAATACCGATTGCGGACATTTGCCGAGACGACCGACGACCTGAAACTGGTTCGCGAAAACGCCCGATGGCGCAAGATCG GCCAGGAGGGGATCAAGGCGACCTGA
Upstream 100 bases:
>100_bases TGAGCATGGCCCGCCTGCGGTTCTGAGATCCGCTGTTTGGCCGCATCCAGCAAGTCTGGTCTCCCTTGGCGTTTGCACCG CAAGCGGCTAGACGGGACCA
Downstream 100 bases:
>100_bases CATGGCCTTCATTGCACGACACCGGCCTTGCGGAGCCCGTCCACCACGAGTTCGAAATCGGCAGGGTTCTTGTAGGGCAA GACCTTGCGACGGTATTCCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 461; Mature: 460
Protein sequence:
>461_residues MTAVSDPTPTPPAEILAVLSLLCPEVVRDIEQNWNAPVSDYARHLWRPVARPASGPAIAARSILREVLHQRLGAIMQPEE IGKALEEFEHRPVIQSGLHCLLLMDRITFDALLLAWLGAVENGLSAFFGFMGTTMTMETIGREGPGWLDVGDDKVNLFGM GRHKLCRKSACVAGPVTLNKRALQAVGDETDASRWLGTLLASQDKVFGTAADALTALNEDLVADWDRSGMALPVFIDDRL AASAVARHLEYDGSLLSRLLIEPARRQRLEHALQDAASSPFGRFLPNTTAYFWGIREERVRKLVLDNGHLIEPDRPHGFS VPFERSHLKQALLDGVLLPNLFLTFLVLAILPRVRVAGGLRQIGYVALFHSILLAALDENAPEERDLAAELQVRENAWGM RVIDEKISVREQLAGLPEGALFPDLLRQYRLRTFAETTDDLKLVRENARWRKIGQEGIKAT
Sequences:
>Translated_461_residues MTAVSDPTPTPPAEILAVLSLLCPEVVRDIEQNWNAPVSDYARHLWRPVARPASGPAIAARSILREVLHQRLGAIMQPEE IGKALEEFEHRPVIQSGLHCLLLMDRITFDALLLAWLGAVENGLSAFFGFMGTTMTMETIGREGPGWLDVGDDKVNLFGM GRHKLCRKSACVAGPVTLNKRALQAVGDETDASRWLGTLLASQDKVFGTAADALTALNEDLVADWDRSGMALPVFIDDRL AASAVARHLEYDGSLLSRLLIEPARRQRLEHALQDAASSPFGRFLPNTTAYFWGIREERVRKLVLDNGHLIEPDRPHGFS VPFERSHLKQALLDGVLLPNLFLTFLVLAILPRVRVAGGLRQIGYVALFHSILLAALDENAPEERDLAAELQVRENAWGM RVIDEKISVREQLAGLPEGALFPDLLRQYRLRTFAETTDDLKLVRENARWRKIGQEGIKAT >Mature_460_residues TAVSDPTPTPPAEILAVLSLLCPEVVRDIEQNWNAPVSDYARHLWRPVARPASGPAIAARSILREVLHQRLGAIMQPEEI GKALEEFEHRPVIQSGLHCLLLMDRITFDALLLAWLGAVENGLSAFFGFMGTTMTMETIGREGPGWLDVGDDKVNLFGMG RHKLCRKSACVAGPVTLNKRALQAVGDETDASRWLGTLLASQDKVFGTAADALTALNEDLVADWDRSGMALPVFIDDRLA ASAVARHLEYDGSLLSRLLIEPARRQRLEHALQDAASSPFGRFLPNTTAYFWGIREERVRKLVLDNGHLIEPDRPHGFSV PFERSHLKQALLDGVLLPNLFLTFLVLAILPRVRVAGGLRQIGYVALFHSILLAALDENAPEERDLAAELQVRENAWGMR VIDEKISVREQLAGLPEGALFPDLLRQYRLRTFAETTDDLKLVRENARWRKIGQEGIKAT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 51154; Mature: 51022
Theoretical pI: Translated: 6.15; Mature: 6.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAVSDPTPTPPAEILAVLSLLCPEVVRDIEQNWNAPVSDYARHLWRPVARPASGPAIAA CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH RSILREVLHQRLGAIMQPEEIGKALEEFEHRPVIQSGLHCLLLMDRITFDALLLAWLGAV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENGLSAFFGFMGTTMTMETIGREGPGWLDVGDDKVNLFGMGRHKLCRKSACVAGPVTLNK HHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEECCHHHHHHHHCCCCCCCHHHH RALQAVGDETDASRWLGTLLASQDKVFGTAADALTALNEDLVADWDRSGMALPVFIDDRL HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHH AASAVARHLEYDGSLLSRLLIEPARRQRLEHALQDAASSPFGRFLPNTTAYFWGIREERV HHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCHHHHH RKLVLDNGHLIEPDRPHGFSVPFERSHLKQALLDGVLLPNLFLTFLVLAILPRVRVAGGL HHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQIGYVALFHSILLAALDENAPEERDLAAELQVRENAWGMRVIDEKISVREQLAGLPEGA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC LFPDLLRQYRLRTFAETTDDLKLVRENARWRKIGQEGIKAT CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TAVSDPTPTPPAEILAVLSLLCPEVVRDIEQNWNAPVSDYARHLWRPVARPASGPAIAA CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCHHHHH RSILREVLHQRLGAIMQPEEIGKALEEFEHRPVIQSGLHCLLLMDRITFDALLLAWLGAV HHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ENGLSAFFGFMGTTMTMETIGREGPGWLDVGDDKVNLFGMGRHKLCRKSACVAGPVTLNK HHHHHHHHHHHHHHHHHHHHCCCCCCCEECCCCCEEEEECCHHHHHHHHCCCCCCCHHHH RALQAVGDETDASRWLGTLLASQDKVFGTAADALTALNEDLVADWDRSGMALPVFIDDRL HHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHH AASAVARHLEYDGSLLSRLLIEPARRQRLEHALQDAASSPFGRFLPNTTAYFWGIREERV HHHHHHHHHHCCHHHHHHHHHCHHHHHHHHHHHHHHHCCCCHHHCCCCHHHHCCCHHHHH RKLVLDNGHLIEPDRPHGFSVPFERSHLKQALLDGVLLPNLFLTFLVLAILPRVRVAGGL HHHHHCCCCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RQIGYVALFHSILLAALDENAPEERDLAAELQVRENAWGMRVIDEKISVREQLAGLPEGA HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCC LFPDLLRQYRLRTFAETTDDLKLVRENARWRKIGQEGIKAT CCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA