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The map label for this gene is 13472797

Identifier: 13472797

GI number: 13472797

Start: 2564238

End: 2564636

Strand: Reverse

Name: 13472797

Synonym: msl8638

Alternate gene names: NA

Gene position: 2564636-2564238 (Counterclockwise)

Preceding gene: 13472798

Following gene: 13472796

Centisome position: 36.45

GC content: 61.9

Gene sequence:

>399_bases
ATGAGCGCGTATTGGATCGCGGTGGCGTCGGCGCAGCATGTGCGGCGCGGCCGGAATGACGGCTTCATGCAGGTCAATCA
CGGCAAGGCGGCGCCGCTGCGCCGCGTCAAGCCCGGCGACGGCATCGTTTACTATTCGCCGACCACAATTTTGGGCGAAA
AAGATGGCCTGCAGGCTTTCACGGCAATCGGTACGGTACGGTACGGGAAGGAGAGCCCTATCAAGGCGAAATGGGCGGCG
GCTTCACGCCGTTCCGGCGCGATGTCGAATGGGCGGTGGCTGAAGAAGCGCCGATCAAGCCACTGCTCGACCGGCTGGAC
TTCACCGCTGGCAAGTCGAACTGGGGGTATCACCTGCGCTTCGGCCTGTTCGAAATCACCGATCACGATTTTCGTCTGA

Upstream 100 bases:

>100_bases
ACTTGGATTTCGGCCGCACTTTCGTTGCGCTCGATCCCGACAATCACCGCCTGCGCGTCTACTGGCTGTCCGACGGGCAA
CAGGCCGATGGGGAACAGAA

Downstream 100 bases:

>100_bases
TCGCAGAGGCGATGGGTGCCCCGAAGACGCTTGCCGAGGCTACGGCTTGAGAGCCTTGTAGACGGCAATGCCGGCGGCGA
GGTCCTCGAGTGCCGCGCCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSAYWIAVASAQHVRRGRNDGFMQVNHGKAAPLRRVKPGDGIVYYSPTTILGEKDGLQAFTAIGTVRYGKESPIKAKWAA
ASRRSGAMSNGRWLKKRRSSHCSTGWTSPLASRTGGITCASACSKSPITIFV

Sequences:

>Translated_132_residues
MSAYWIAVASAQHVRRGRNDGFMQVNHGKAAPLRRVKPGDGIVYYSPTTILGEKDGLQAFTAIGTVRYGKESPIKAKWAA
ASRRSGAMSNGRWLKKRRSSHCSTGWTSPLASRTGGITCASACSKSPITIFV
>Mature_131_residues
SAYWIAVASAQHVRRGRNDGFMQVNHGKAAPLRRVKPGDGIVYYSPTTILGEKDGLQAFTAIGTVRYGKESPIKAKWAAA
SRRSGAMSNGRWLKKRRSSHCSTGWTSPLASRTGGITCASACSKSPITIFV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0310 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y8638_RHILO (Q98GR6)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_104364.1
- ProteinModelPortal:   Q98GR6
- SMR:   Q98GR6
- GeneID:   1227025
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:msl8638
- NMPDR:   fig|266835.1.peg.2468
- ProtClustDB:   PRK02268
- HAMAP:   MF_00771
- InterPro:   IPR002740
- InterPro:   IPR015947
- InterPro:   IPR022996

Pfam domain/function: PF01878 DUF55; SSF88697 PUA-like

EC number: NA

Molecular weight: Translated: 14229; Mature: 14098

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSAYWIAVASAQHVRRGRNDGFMQVNHGKAAPLRRVKPGDGIVYYSPTTILGEKDGLQAF
CCEEEEEECCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCEEECCCCCHHHH
TAIGTVRYGKESPIKAKWAAASRRSGAMSNGRWLKKRRSSHCSTGWTSPLASRTGGITCA
HHHHHEECCCCCCCCEEHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHCCCCEEEE
SACSKSPITIFV
HHCCCCCEEEEC
>Mature Secondary Structure 
SAYWIAVASAQHVRRGRNDGFMQVNHGKAAPLRRVKPGDGIVYYSPTTILGEKDGLQAF
CEEEEEECCHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCEEEECCCEEECCCCCHHHH
TAIGTVRYGKESPIKAKWAAASRRSGAMSNGRWLKKRRSSHCSTGWTSPLASRTGGITCA
HHHHHEECCCCCCCCEEHHHCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHCCCCEEEE
SACSKSPITIFV
HHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968