| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472791
Identifier: 13472791
GI number: 13472791
Start: 2560397
End: 2561110
Strand: Reverse
Name: 13472791
Synonym: mll3200
Alternate gene names: NA
Gene position: 2561110-2560397 (Counterclockwise)
Preceding gene: 13472796
Following gene: 13472790
Centisome position: 36.4
GC content: 61.76
Gene sequence:
>714_bases ATGTTAGCGCGATCGAATGAACCGACCAGCCCCGAGACGGAGTTGGCTCCCCCGGCGGATGGCTGGACGCGGGGCGACGC GTTCGACCGCGCCCAGCGTCATTCGCGCCGCGTGCGCGTGCTCAAATTCGCCGTGCCGCTGGCCGCAGGGCTGATCGCCG TCGCCTTCCCGGTCTATTCCTATCTGGCCGCACCCGTCTCCGTCGCGGTGCAGTCGGAAGGCGCGGCCTTTTCCAACGGC AAGCTGGTGATGGCCAATCCCAAGCTCAACGGGTTCACCAAGCAGAAGCAGCCCTATTCGATGACGGCCCTGCGGGCGAT ACAGGATGTCAACACGCAAGGCATTATCGAGCTCGAAGGCATAGACGCCAAGGTGCCGGTCGGGCCGGACAATGTCGCCG CGATCAAAGCCTCGCACGGTATCTACGATCGCGACGGCAACACGATGAAAATGACCAGCGACGTCATGATCACCACGACC GACGGCATGCAAGCCAAGTTCAAATCGGTCTTCCTCGACATGGGCAAAGGCACTATGAAGACGGACGATCCCGTCGACGT CAGCAGTGGCGGGTCGCAGATCACAGCGGATTCCCTGTCGGTCCAGGACAATGGCAAGATCCTGGTGTTCGAGAAGAGGG TGCGCGTCAACATCGATCCCGCCAGCGTGAAGGCGGCTGAGGCAAAGGGCGAAGAAGCGAATGTGGCACAATAG
Upstream 100 bases:
>100_bases ACATTTTTGCGGTTTTCGTGGGCTTGTGCTTGCTTGAGAGTGCCGGCCCCCCACCTATAGGCGGTGTTCCCTGACGGGCA GGGTCTAGAAGAAAGCAGTC
Downstream 100 bases:
>100_bases TTTGACACGGCTTGCGGCCGCAACTTCGGCGCTGCTCCTGCTGGGCCTTGTGCCGTCGCTGGCGCAGTCGGGTGCCAGCA GCCAGGTGTCCGGGCTCAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 237
Protein sequence:
>237_residues MLARSNEPTSPETELAPPADGWTRGDAFDRAQRHSRRVRVLKFAVPLAAGLIAVAFPVYSYLAAPVSVAVQSEGAAFSNG KLVMANPKLNGFTKQKQPYSMTALRAIQDVNTQGIIELEGIDAKVPVGPDNVAAIKASHGIYDRDGNTMKMTSDVMITTT DGMQAKFKSVFLDMGKGTMKTDDPVDVSSGGSQITADSLSVQDNGKILVFEKRVRVNIDPASVKAAEAKGEEANVAQ
Sequences:
>Translated_237_residues MLARSNEPTSPETELAPPADGWTRGDAFDRAQRHSRRVRVLKFAVPLAAGLIAVAFPVYSYLAAPVSVAVQSEGAAFSNG KLVMANPKLNGFTKQKQPYSMTALRAIQDVNTQGIIELEGIDAKVPVGPDNVAAIKASHGIYDRDGNTMKMTSDVMITTT DGMQAKFKSVFLDMGKGTMKTDDPVDVSSGGSQITADSLSVQDNGKILVFEKRVRVNIDPASVKAAEAKGEEANVAQ >Mature_237_residues MLARSNEPTSPETELAPPADGWTRGDAFDRAQRHSRRVRVLKFAVPLAAGLIAVAFPVYSYLAAPVSVAVQSEGAAFSNG KLVMANPKLNGFTKQKQPYSMTALRAIQDVNTQGIIELEGIDAKVPVGPDNVAAIKASHGIYDRDGNTMKMTSDVMITTT DGMQAKFKSVFLDMGKGTMKTDDPVDVSSGGSQITADSLSVQDNGKILVFEKRVRVNIDPASVKAAEAKGEEANVAQ
Specific function: Unknown
COG id: COG5375
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25242; Mature: 25242
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLARSNEPTSPETELAPPADGWTRGDAFDRAQRHSRRVRVLKFAVPLAAGLIAVAFPVYS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHH YLAAPVSVAVQSEGAAFSNGKLVMANPKLNGFTKQKQPYSMTALRAIQDVNTQGIIELEG HHHCCEEEEEECCCCEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC IDAKVPVGPDNVAAIKASHGIYDRDGNTMKMTSDVMITTTDGMQAKFKSVFLDMGKGTMK CCEECCCCCCCEEEEEECCCEEECCCCEEEEECCEEEEECCCCHHHHHHHHHHCCCCCCC TDDPVDVSSGGSQITADSLSVQDNGKILVFEKRVRVNIDPASVKAAEAKGEEANVAQ CCCCCEECCCCCEEEECEEEECCCCCEEEEEEEEEEEECHHHEEHHHCCCCCCCCCC >Mature Secondary Structure MLARSNEPTSPETELAPPADGWTRGDAFDRAQRHSRRVRVLKFAVPLAAGLIAVAFPVYS CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHEEEEEHHHHHHHHHHHHHHHHHH YLAAPVSVAVQSEGAAFSNGKLVMANPKLNGFTKQKQPYSMTALRAIQDVNTQGIIELEG HHHCCEEEEEECCCCEECCCEEEEECCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECC IDAKVPVGPDNVAAIKASHGIYDRDGNTMKMTSDVMITTTDGMQAKFKSVFLDMGKGTMK CCEECCCCCCCEEEEEECCCEEECCCCEEEEECCEEEEECCCCHHHHHHHHHHCCCCCCC TDDPVDVSSGGSQITADSLSVQDNGKILVFEKRVRVNIDPASVKAAEAKGEEANVAQ CCCCCEECCCCCEEEECEEEECCCCCEEEEEEEEEEEECHHHEEHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA