| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472773
Identifier: 13472773
GI number: 13472773
Start: 2546037
End: 2546531
Strand: Direct
Name: 13472773
Synonym: mlr3177
Alternate gene names: NA
Gene position: 2546037-2546531 (Clockwise)
Preceding gene: 13472771
Following gene: 13472775
Centisome position: 36.19
GC content: 65.45
Gene sequence:
>495_bases ATGAGCGACACAAACGCCTCGTTCCAGGCTGACGAGCCCTTCTTTCACGCATTGCTGACCCCACACCGGTCGCTGGGCAG GAAGGGCTTCCTGGTCCTGATGGGCGCGCTGTCGTTCGGCTGGCTGGGGACCGGCGCGTTCTTCCTGTCGCGCGGCGCCT GGCCGGTATTCGGCTTCTTCGGCCTTGACGTGGTCGCCGTCTACATCGCCTTCCGCGCCAACTACCGCGCCGCCCGCGCC CGCGAAGAGGTGTCGGTCTCGCGTACCACCCTCGACATCCGCAAGACGGCCCCTTCGGGAAAATCGGAGGCCCACCGCTT CAACCCGTTCTGGGCACGGTTTTCGGTCGCTCGTCACGCCGAGATCGGCATCACCAGAATGACGGTTGAAGGCCAAGGCC AGAACGTGCCGATCGGCGGTTTTCTCGATCCCGAGTCCCGCGAGAGTTTTGCGACGGCTTTTTCACGCGCGCTGGCGACC GCCAAGGCGCGCTGA
Upstream 100 bases:
>100_bases GGCGTTCGAGCCGTCGCGTCGTCCGGCCGGTAGGTCTTTTTCGGGCATGGAAGAATCTTTGGACTTGGGGCTCGCCATTT CCCTCCTATAATATCCCGTC
Downstream 100 bases:
>100_bases ATCTAGAATCGATAGCGCAGAAGCCTGCCGACCTTGCGCAGCGCCGGAATGTGTTTCCACAGGCGAACGAAGAGTTTGGC CGACCAGCCCATGCGGGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MSDTNASFQADEPFFHALLTPHRSLGRKGFLVLMGALSFGWLGTGAFFLSRGAWPVFGFFGLDVVAVYIAFRANYRAARA REEVSVSRTTLDIRKTAPSGKSEAHRFNPFWARFSVARHAEIGITRMTVEGQGQNVPIGGFLDPESRESFATAFSRALAT AKAR
Sequences:
>Translated_164_residues MSDTNASFQADEPFFHALLTPHRSLGRKGFLVLMGALSFGWLGTGAFFLSRGAWPVFGFFGLDVVAVYIAFRANYRAARA REEVSVSRTTLDIRKTAPSGKSEAHRFNPFWARFSVARHAEIGITRMTVEGQGQNVPIGGFLDPESRESFATAFSRALAT AKAR >Mature_163_residues SDTNASFQADEPFFHALLTPHRSLGRKGFLVLMGALSFGWLGTGAFFLSRGAWPVFGFFGLDVVAVYIAFRANYRAARAR EEVSVSRTTLDIRKTAPSGKSEAHRFNPFWARFSVARHAEIGITRMTVEGQGQNVPIGGFLDPESRESFATAFSRALATA KAR
Specific function: Unknown
COG id: COG5488
COG function: function code S; Integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18037; Mature: 17905
Theoretical pI: Translated: 11.33; Mature: 11.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDTNASFQADEPFFHALLTPHRSLGRKGFLVLMGALSFGWLGTGAFFLSRGAWPVFGFF CCCCCCCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHH GLDVVAVYIAFRANYRAARAREEVSVSRTTLDIRKTAPSGKSEAHRFNPFWARFSVARHA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHC EIGITRMTVEGQGQNVPIGGFLDPESRESFATAFSRALATAKAR CCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SDTNASFQADEPFFHALLTPHRSLGRKGFLVLMGALSFGWLGTGAFFLSRGAWPVFGFF CCCCCCCCCCCHHHHHHHCCHHHCCCCCHHHHHHHHHHCHHHHHHHHHHCCCCHHHHHH GLDVVAVYIAFRANYRAARAREEVSVSRTTLDIRKTAPSGKSEAHRFNPFWARFSVARHA HHHHHHHHHHHHCCCHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCCHHHHHHHHHHC EIGITRMTVEGQGQNVPIGGFLDPESRESFATAFSRALATAKAR CCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA