| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is yufP [H]
Identifier: 13472754
GI number: 13472754
Start: 2527473
End: 2528543
Strand: Direct
Name: yufP [H]
Synonym: mlr3155
Alternate gene names: 13472754
Gene position: 2527473-2528543 (Clockwise)
Preceding gene: 13472753
Following gene: 13472755
Centisome position: 35.92
GC content: 64.33
Gene sequence:
>1071_bases GTGGCCTTCATCGTCGCCGGCTTCGTCGTGCTCCTGGTCGGCGAGAACCCGTTCCGCGCCGCCGTCATCCTGGTCGAGGG CGCCTTCGGCAAGGGGACCGGCATCGCCTTCACCCTCTTCTATGCCACCACCTTCATCTTCACCGGCCTTTCGGTGGCGG TGGCGGCGCATTGCGGCCTGTTCAACATCGGTACCGAGGGACAGGCCTATATTGCGGGCCTGGGCATCGCCATCATCTGC CTGTCGTTCGACAGCGTGCTGCCCTGGTGGCTGACATTTCCGATGGCAATAGTCGCTTCGGCGCTTGTGGGCGCCTTGTG GGCGCTCATCCCCGCCTATCTGCAGGCCAAGCGCGGCTCGCACATCGTCATCACCACCATCATGTTCAACTTCATCGCCG CCTCGATCATGGTCTATCTGCTGGTCGGACCGCTGAAGCCGGCGGGCTCGCAGGCACCGCAGACCCGCAACTTCCTTGCC GGCGCCGAGCTGCCGAAACTCAACTGGATCATCGAACTGTTCGGCGCCAAGATCCGCTCGGCGCCGCTCAACGTCACCTT CTTGCTGGCGCTGCTCATGGCCTTCCTGGTCTGGCTGCTGATCTGGCGCACCAAGCTCGGCTATGAGATGCGCACCTATG GCCACAGCCCCAAGGCGGCGCGCTATGCCGGCATTTCGGAAACCCGCATCATCATCACCGCGATGATGATCTCGGGCGCG CTCGCCGGCATGATGGCGCTCAATCCGGTGATGGGCGACCAGCACAATGTCGCGATCGACTTCGTCTCCGGCGCCGGCTT CGTCGGCATCGCCGTGGCGCTGATGGGGCGCCTGCATCCGGTCGGCATCGTGCTGGCGGCGGTCCTGTTCGGCATGCTCT ATCAGGGCGGCGCCGAACTCGCCTTCGAAATGCCGGCCATCAGCCGCGACATGATCGTCATCATCCAGGGCCTGGTGATC CTGTTCGCCGGCGCGCTCGAACACATGTTCAGGCCTTACATCCAGGCGCTGTTCGCCTCGTTCAGTCCGCGGTCGGTCGG CATGGAAGCGGTCAAGGGAAAGGGCGCCTGA
Upstream 100 bases:
>100_bases TGGCCGGCGTCGAGCGCCAGGAGGCAGCACTTTGAGCACGCCATACGCCAAACTGCCGGCCTGGGCCGATTATGGGCTGA TCCCGCTGATCAACCTGGCG
Downstream 100 bases:
>100_bases CATGGATGTCTTTATCGCCATCGTGCAGATACTCGACTCGACCATCCGCCTGTCGGTGCCACTGCTGCTCGCCTGCCTCG CCGGCCTCTTTTCCGAACGT
Product: sugar ABC transporter, permease protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 356; Mature: 355
Protein sequence:
>356_residues MAFIVAGFVVLLVGENPFRAAVILVEGAFGKGTGIAFTLFYATTFIFTGLSVAVAAHCGLFNIGTEGQAYIAGLGIAIIC LSFDSVLPWWLTFPMAIVASALVGALWALIPAYLQAKRGSHIVITTIMFNFIAASIMVYLLVGPLKPAGSQAPQTRNFLA GAELPKLNWIIELFGAKIRSAPLNVTFLLALLMAFLVWLLIWRTKLGYEMRTYGHSPKAARYAGISETRIIITAMMISGA LAGMMALNPVMGDQHNVAIDFVSGAGFVGIAVALMGRLHPVGIVLAAVLFGMLYQGGAELAFEMPAISRDMIVIIQGLVI LFAGALEHMFRPYIQALFASFSPRSVGMEAVKGKGA
Sequences:
>Translated_356_residues MAFIVAGFVVLLVGENPFRAAVILVEGAFGKGTGIAFTLFYATTFIFTGLSVAVAAHCGLFNIGTEGQAYIAGLGIAIIC LSFDSVLPWWLTFPMAIVASALVGALWALIPAYLQAKRGSHIVITTIMFNFIAASIMVYLLVGPLKPAGSQAPQTRNFLA GAELPKLNWIIELFGAKIRSAPLNVTFLLALLMAFLVWLLIWRTKLGYEMRTYGHSPKAARYAGISETRIIITAMMISGA LAGMMALNPVMGDQHNVAIDFVSGAGFVGIAVALMGRLHPVGIVLAAVLFGMLYQGGAELAFEMPAISRDMIVIIQGLVI LFAGALEHMFRPYIQALFASFSPRSVGMEAVKGKGA >Mature_355_residues AFIVAGFVVLLVGENPFRAAVILVEGAFGKGTGIAFTLFYATTFIFTGLSVAVAAHCGLFNIGTEGQAYIAGLGIAIICL SFDSVLPWWLTFPMAIVASALVGALWALIPAYLQAKRGSHIVITTIMFNFIAASIMVYLLVGPLKPAGSQAPQTRNFLAG AELPKLNWIIELFGAKIRSAPLNVTFLLALLMAFLVWLLIWRTKLGYEMRTYGHSPKAARYAGISETRIIITAMMISGAL AGMMALNPVMGDQHNVAIDFVSGAGFVGIAVALMGRLHPVGIVLAAVLFGMLYQGGAELAFEMPAISRDMIVIIQGLVIL FAGALEHMFRPYIQALFASFSPRSVGMEAVKGKGA
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4603
COG function: function code R; ABC-type uncharacterized transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR002229 [H]
Pfam domain/function: PF02653 BPD_transp_2 [H]
EC number: NA
Molecular weight: Translated: 37939; Mature: 37808
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 4.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAFIVAGFVVLLVGENPFRAAVILVEGAFGKGTGIAFTLFYATTFIFTGLSVAVAAHCGL CHHHHEEHHHHEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCE FNIGTEGQAYIAGLGIAIICLSFDSVLPWWLTFPMAIVASALVGALWALIPAYLQAKRGS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HIVITTIMFNFIAASIMVYLLVGPLKPAGSQAPQTRNFLAGAELPKLNWIIELFGAKIRS EEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC APLNVTFLLALLMAFLVWLLIWRTKLGYEMRTYGHSPKAARYAGISETRIIITAMMISGA CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHH LAGMMALNPVMGDQHNVAIDFVSGAGFVGIAVALMGRLHPVGIVLAAVLFGMLYQGGAEL HHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCE AFEMPAISRDMIVIIQGLVILFAGALEHMFRPYIQALFASFSPRSVGMEAVKGKGA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHCCCCC >Mature Secondary Structure AFIVAGFVVLLVGENPFRAAVILVEGAFGKGTGIAFTLFYATTFIFTGLSVAVAAHCGL HHHHEEHHHHEECCCCCEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCE FNIGTEGQAYIAGLGIAIICLSFDSVLPWWLTFPMAIVASALVGALWALIPAYLQAKRGS EECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC HIVITTIMFNFIAASIMVYLLVGPLKPAGSQAPQTRNFLAGAELPKLNWIIELFGAKIRS EEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHHHCC APLNVTFLLALLMAFLVWLLIWRTKLGYEMRTYGHSPKAARYAGISETRIIITAMMISGA CCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHCCCCCHHHHHHHHHHHHH LAGMMALNPVMGDQHNVAIDFVSGAGFVGIAVALMGRLHPVGIVLAAVLFGMLYQGGAEL HHHHHHHCCCCCCCCCEEEEEECCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCE AFEMPAISRDMIVIIQGLVILFAGALEHMFRPYIQALFASFSPRSVGMEAVKGKGA EEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHCCHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9274030; 9384377 [H]