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The map label for this gene is fnrL [H]

Identifier: 13472740

GI number: 13472740

Start: 2517401

End: 2518222

Strand: Reverse

Name: fnrL [H]

Synonym: mll3135

Alternate gene names: 13472740

Gene position: 2518222-2517401 (Counterclockwise)

Preceding gene: 13472743

Following gene: 13472738

Centisome position: 35.79

GC content: 62.65

Gene sequence:

>822_bases
ATGCCTATCAGCGGCGAAAGGCTTAGGGCAGCCGAAGCCGCCTTTGCTTCCGACAGAATAAGATGGCGATCGGCTGCCAA
AGCCCTTTCGCCGGAGATTGCGGTGCTTGAATCCCTCTATCTGAACCTGGGACAGCATGACGCCCTGTCGGACGCCGAGA
AGGCGCTGCTGGCCGGCGCCATGACGTTCGAGAGGCATTTCGCCACCGGCCAGGACATCGTCGCATCGGGGTCGCGGCCG
ACTTATTCGACGCTGATCCTCGACGGGCTGGCGGCGCGCTACAAGGTGCTGGAGAATGGCGGCCGGCAGTTCACCTCATT
GCAGGTGTCCGGCGATTTCGTCGATCTCCACGCTTTCCTGCTGAAGACCATGGATCACGGCATCGTCGCTCTGTCGCCCT
GTCATGTCATGTTCGCGGACCATAGCCGGCTTCGCACCATCACCGAGCAGGCGCCGCACCTGACCCGGTTGTTGTGGCTG
GACACGCTGGTCGACGGCGCCATCCATCGCGAGTGGATCGTCGCCATGGGGCGGCGGTCCAAGACCTCGCATCTGGCCCA
TCTCGTCTGTGAACTCTTCGTGCGGCTGCAGGTGGTGCAGCGGACCAACGGCATGAGCTTTCACCTGCCGCTCTCGCAGG
CTGAACTGGCCGATGTGCTGGGCCTGTCGGTGGTGCACATGAACCGGGTTATCGGCGCCTTGCGCAAGGTCGGAGTCGTC
AGCTGGGCAAACCACACGGTGACCATTCTGGATTGGCACCGGCTGCAGGAAATCGCCGAGTTCGATCCCACCTATCTCAG
CATGATGCGGGAGCCGCGCTAA

Upstream 100 bases:

>100_bases
GATGAAATGGCGAGATATTCGACCGACAATTCGCGGACCAGCCAGTTGTTCCATCAGAGGTGGCATTTGCCGTGGAACAA
GCAGGCCTTAACAAATGTTA

Downstream 100 bases:

>100_bases
GGTGTATCGATATTCAGGTGAGGTCGGCCTGCAAACGATAGCTTTCTGCGCTTCCGGTGCTCACGTACTTAAGTACGCTC
CGCTCCGGTTCTCGAAAGCC

Product: transcriptional regulator, Fnr-type

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MPISGERLRAAEAAFASDRIRWRSAAKALSPEIAVLESLYLNLGQHDALSDAEKALLAGAMTFERHFATGQDIVASGSRP
TYSTLILDGLAARYKVLENGGRQFTSLQVSGDFVDLHAFLLKTMDHGIVALSPCHVMFADHSRLRTITEQAPHLTRLLWL
DTLVDGAIHREWIVAMGRRSKTSHLAHLVCELFVRLQVVQRTNGMSFHLPLSQAELADVLGLSVVHMNRVIGALRKVGVV
SWANHTVTILDWHRLQEIAEFDPTYLSMMREPR

Sequences:

>Translated_273_residues
MPISGERLRAAEAAFASDRIRWRSAAKALSPEIAVLESLYLNLGQHDALSDAEKALLAGAMTFERHFATGQDIVASGSRP
TYSTLILDGLAARYKVLENGGRQFTSLQVSGDFVDLHAFLLKTMDHGIVALSPCHVMFADHSRLRTITEQAPHLTRLLWL
DTLVDGAIHREWIVAMGRRSKTSHLAHLVCELFVRLQVVQRTNGMSFHLPLSQAELADVLGLSVVHMNRVIGALRKVGVV
SWANHTVTILDWHRLQEIAEFDPTYLSMMREPR
>Mature_272_residues
PISGERLRAAEAAFASDRIRWRSAAKALSPEIAVLESLYLNLGQHDALSDAEKALLAGAMTFERHFATGQDIVASGSRPT
YSTLILDGLAARYKVLENGGRQFTSLQVSGDFVDLHAFLLKTMDHGIVALSPCHVMFADHSRLRTITEQAPHLTRLLWLD
TLVDGAIHREWIVAMGRRSKTSHLAHLVCELFVRLQVVQRTNGMSFHLPLSQAELADVLGLSVVHMNRVIGALRKVGVVS
WANHTVTILDWHRLQEIAEFDPTYLSMMREPR

Specific function: Anaerobic regulatory protein; transcriptional activator of hemA. Appears to regulate other genes [H]

COG id: COG0664

COG function: function code T; cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH crp-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR000595
- InterPro:   IPR001808
- InterPro:   IPR012318
- InterPro:   IPR014710
- InterPro:   IPR018335
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00325 Crp [H]

EC number: NA

Molecular weight: Translated: 30436; Mature: 30304

Theoretical pI: Translated: 7.87; Mature: 7.87

Prosite motif: PS51063 HTH_CRP_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISGERLRAAEAAFASDRIRWRSAAKALSPEIAVLESLYLNLGQHDALSDAEKALLAGA
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
MTFERHFATGQDIVASGSRPTYSTLILDGLAARYKVLENGGRQFTSLQVSGDFVDLHAFL
HHHHHHHCCCCHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
LKTMDHGIVALSPCHVMFADHSRLRTITEQAPHLTRLLWLDTLVDGAIHREWIVAMGRRS
HHHHCCCEEEECCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KTSHLAHLVCELFVRLQVVQRTNGMSFHLPLSQAELADVLGLSVVHMNRVIGALRKVGVV
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
SWANHTVTILDWHRLQEIAEFDPTYLSMMREPR
EECCCEEEEEEHHHHHHHHHCCHHHHHHHCCCC
>Mature Secondary Structure 
PISGERLRAAEAAFASDRIRWRSAAKALSPEIAVLESLYLNLGQHDALSDAEKALLAGA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHH
MTFERHFATGQDIVASGSRPTYSTLILDGLAARYKVLENGGRQFTSLQVSGDFVDLHAFL
HHHHHHHCCCCHHEECCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCHHHHHHHH
LKTMDHGIVALSPCHVMFADHSRLRTITEQAPHLTRLLWLDTLVDGAIHREWIVAMGRRS
HHHHCCCEEEECCCEEEECCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KTSHLAHLVCELFVRLQVVQRTNGMSFHLPLSQAELADVLGLSVVHMNRVIGALRKVGVV
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHE
SWANHTVTILDWHRLQEIAEFDPTYLSMMREPR
EECCCEEEEEEHHHHHHHHHCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7592416 [H]