BacMap

Definition	Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession	NC_002678
Length	7,036,071

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The map label for this gene is ucpA [C]

Identifier: 13472715

GI number: 13472715

Start: 2492050

End: 2492826

Strand: Direct

Name: ucpA [C]

Synonym: mlr3100

Alternate gene names: 13472715

Gene position: 2492050-2492826 (Clockwise)

Preceding gene: 13472714

Following gene: 13472716

Centisome position: 35.42

GC content: 65.77

Gene sequence:

>777_bases
ATGGGCCGCTTTGACGGAGCAACCGTGCTGATCACAGGTGCCGCCGGGGGGCTCGGCCGGGGTGCCGCGAAAGGCTTTGC
CAGCGAGGGCGCGCGGCTGGTGCTGTCGGACATCGACGAAAAGGCGCTCGCCGATCTTGCCGCAACGCTGCCGGCCGAAA
CGGCGATCCTGGCCGGCAACGTAGCCGACGAAAAACTGTCCGAGGATCTGGTCAGGCTGGCGGTCGAAAAATTCGGCCGG
CTGGATGTCACCGTCAACAATGCCGGCATCGTCCAGAGTTTCGTGCGCCTGCCGCAGGTTCCTTCGGACGAGGCGCGCCG
CGTGCTTGAGATCGACCTGCTTGGCGTCTTCTATGCCATGAAGCACCAGATCCCGCAGATGGAGCGGCAGTTCAGGGCTA
CGGCCAAGGGCGGCGCCATCGTCAACATCGCCTCGGTTGCCGGACTGGTCGGCGCGCCGAAACTCTCGGTTTATGCCGCC
GCCAAGCATGGCGTCGTCGGGCTGACCAAATCGGCGGCCGCCGAATATGCAACCAAGGGTGTGCGCATCAACGCCATCTG
TCCGGCTCACACCAGGACGGCAATGGTGGACAGTTTCGTGCGCGCCTCCGGTGCGCCGGAGGCAGAGGCGTTGGCCGAAC
TGACACGCGGTGTGCCGATGAAACGCGTGGCGGAAGTCGACGAAATCACCACCGCCATCCTGTTCGCCGCCGACCCGGCC
AACTCCTTCATGACCGGCCATGCGCTGGCCGTCGACGGCGGCGTCGGCGCCATCTGA

Upstream 100 bases:

>100_bases
CTCCAATCCCGAAAAGGCCAGGACCTATGGCGAGGCGGTGAAACTGCTTTCGCACCTCGCCGCCAGACTGATCGACACGC
GGACATGACGGGGAGCCATA

Downstream 100 bases:

>100_bases
CCGCCGCGATCCTACCATGCCGTTTGGGAACTTCCCGTGCCCTTGTCCGTTTCCGTACAGCGTATATAATTTAGCCAGAT
ACAACCACCCCCGTCACCCA

Product: oxidoreductase, short chain dehydrogenase/reductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 257

Protein sequence:

>258_residues
MGRFDGATVLITGAAGGLGRGAAKGFASEGARLVLSDIDEKALADLAATLPAETAILAGNVADEKLSEDLVRLAVEKFGR
LDVTVNNAGIVQSFVRLPQVPSDEARRVLEIDLLGVFYAMKHQIPQMERQFRATAKGGAIVNIASVAGLVGAPKLSVYAA
AKHGVVGLTKSAAAEYATKGVRINAICPAHTRTAMVDSFVRASGAPEAEALAELTRGVPMKRVAEVDEITTAILFAADPA
NSFMTGHALAVDGGVGAI

Sequences:

>Translated_258_residues
MGRFDGATVLITGAAGGLGRGAAKGFASEGARLVLSDIDEKALADLAATLPAETAILAGNVADEKLSEDLVRLAVEKFGR
LDVTVNNAGIVQSFVRLPQVPSDEARRVLEIDLLGVFYAMKHQIPQMERQFRATAKGGAIVNIASVAGLVGAPKLSVYAA
AKHGVVGLTKSAAAEYATKGVRINAICPAHTRTAMVDSFVRASGAPEAEALAELTRGVPMKRVAEVDEITTAILFAADPA
NSFMTGHALAVDGGVGAI
>Mature_257_residues
GRFDGATVLITGAAGGLGRGAAKGFASEGARLVLSDIDEKALADLAATLPAETAILAGNVADEKLSEDLVRLAVEKFGRL
DVTVNNAGIVQSFVRLPQVPSDEARRVLEIDLLGVFYAMKHQIPQMERQFRATAKGGAIVNIASVAGLVGAPKLSVYAAA
KHGVVGLTKSAAAEYATKGVRINAICPAHTRTAMVDSFVRASGAPEAEALAELTRGVPMKRVAEVDEITTAILFAADPAN
SFMTGHALAVDGGVGAI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI31542939, Length=201, Percent_Identity=36.318407960199, Blast_Score=119, Evalue=3e-27,
Organism=Homo sapiens, GI66933014, Length=255, Percent_Identity=32.156862745098, Blast_Score=109, Evalue=3e-24,
Organism=Homo sapiens, GI19923817, Length=264, Percent_Identity=31.0606060606061, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI59889578, Length=231, Percent_Identity=32.034632034632, Blast_Score=105, Evalue=4e-23,
Organism=Homo sapiens, GI224922801, Length=174, Percent_Identity=35.0574712643678, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI40254992, Length=248, Percent_Identity=28.6290322580645, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI32483357, Length=248, Percent_Identity=27.4193548387097, Blast_Score=93, Evalue=2e-19,
Organism=Homo sapiens, GI4504505, Length=216, Percent_Identity=35.6481481481481, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI15277342, Length=264, Percent_Identity=27.2727272727273, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI142976729, Length=199, Percent_Identity=31.6582914572864, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI7705925, Length=255, Percent_Identity=30.1960784313725, Blast_Score=86, Evalue=2e-17,
Organism=Homo sapiens, GI4758504, Length=257, Percent_Identity=29.9610894941634, Blast_Score=83, Evalue=2e-16,
Organism=Homo sapiens, GI210032110, Length=200, Percent_Identity=30, Blast_Score=82, Evalue=6e-16,
Organism=Homo sapiens, GI126723750, Length=251, Percent_Identity=25.8964143426295, Blast_Score=75, Evalue=4e-14,
Organism=Homo sapiens, GI7706318, Length=201, Percent_Identity=28.3582089552239, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI20149619, Length=209, Percent_Identity=29.6650717703349, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI126723191, Length=192, Percent_Identity=28.6458333333333, Blast_Score=74, Evalue=2e-13,
Organism=Homo sapiens, GI5031737, Length=250, Percent_Identity=25.2, Blast_Score=71, Evalue=9e-13,
Organism=Homo sapiens, GI83715985, Length=182, Percent_Identity=31.8681318681319, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI40807363, Length=215, Percent_Identity=28.8372093023256, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI32455239, Length=224, Percent_Identity=26.3392857142857, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI5031765, Length=224, Percent_Identity=26.3392857142857, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI10190704, Length=251, Percent_Identity=28.6852589641434, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI25282469, Length=221, Percent_Identity=29.4117647058824, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI7705855, Length=196, Percent_Identity=23.9795918367347, Blast_Score=65, Evalue=8e-11,
Organism=Escherichia coli, GI87082100, Length=262, Percent_Identity=38.9312977099237, Blast_Score=152, Evalue=2e-38,
Organism=Escherichia coli, GI1787335, Length=252, Percent_Identity=31.7460317460317, Blast_Score=111, Evalue=5e-26,
Organism=Escherichia coli, GI1789378, Length=258, Percent_Identity=25.968992248062, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1787905, Length=255, Percent_Identity=29.4117647058824, Blast_Score=100, Evalue=2e-22,
Organism=Escherichia coli, GI1790717, Length=255, Percent_Identity=30.5882352941176, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789208, Length=263, Percent_Identity=30.4182509505703, Blast_Score=97, Evalue=7e-22,
Organism=Escherichia coli, GI87082160, Length=256, Percent_Identity=26.953125, Blast_Score=95, Evalue=4e-21,
Organism=Escherichia coli, GI1788459, Length=257, Percent_Identity=29.9610894941634, Blast_Score=93, Evalue=2e-20,
Organism=Escherichia coli, GI1786812, Length=254, Percent_Identity=29.1338582677165, Blast_Score=88, Evalue=5e-19,
Organism=Escherichia coli, GI2367175, Length=253, Percent_Identity=27.2727272727273, Blast_Score=87, Evalue=1e-18,
Organism=Escherichia coli, GI1789057, Length=256, Percent_Identity=28.515625, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI2367365, Length=258, Percent_Identity=29.0697674418605, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1787526, Length=208, Percent_Identity=28.8461538461538, Blast_Score=70, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17555706, Length=248, Percent_Identity=33.4677419354839, Blast_Score=119, Evalue=1e-27,
Organism=Caenorhabditis elegans, GI25147288, Length=259, Percent_Identity=31.2741312741313, Blast_Score=113, Evalue=1e-25,
Organism=Caenorhabditis elegans, GI193203117, Length=200, Percent_Identity=36, Blast_Score=103, Evalue=6e-23,
Organism=Caenorhabditis elegans, GI193203115, Length=197, Percent_Identity=36.5482233502538, Blast_Score=103, Evalue=9e-23,
Organism=Caenorhabditis elegans, GI71994604, Length=258, Percent_Identity=31.0077519379845, Blast_Score=103, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI17562990, Length=269, Percent_Identity=30.1115241635688, Blast_Score=102, Evalue=1e-22,
Organism=Caenorhabditis elegans, GI71994600, Length=259, Percent_Identity=32.046332046332, Blast_Score=102, Evalue=2e-22,
Organism=Caenorhabditis elegans, GI17544670, Length=283, Percent_Identity=26.5017667844523, Blast_Score=100, Evalue=5e-22,
Organism=Caenorhabditis elegans, GI17560150, Length=271, Percent_Identity=29.520295202952, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17562908, Length=269, Percent_Identity=31.2267657992565, Blast_Score=100, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI17561402, Length=259, Percent_Identity=27.027027027027, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI17538182, Length=264, Percent_Identity=29.9242424242424, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI17562906, Length=272, Percent_Identity=29.7794117647059, Blast_Score=98, Evalue=4e-21,
Organism=Caenorhabditis elegans, GI193204405, Length=270, Percent_Identity=29.2592592592593, Blast_Score=98, Evalue=5e-21,
Organism=Caenorhabditis elegans, GI17559104, Length=281, Percent_Identity=29.1814946619217, Blast_Score=96, Evalue=1e-20,
Organism=Caenorhabditis elegans, GI17563726, Length=278, Percent_Identity=28.7769784172662, Blast_Score=95, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17508895, Length=242, Percent_Identity=29.3388429752066, Blast_Score=94, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17562904, Length=275, Percent_Identity=28.3636363636364, Blast_Score=92, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17560676, Length=254, Percent_Identity=25.1968503937008, Blast_Score=89, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI17560220, Length=276, Percent_Identity=30.7971014492754, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI17568967, Length=215, Percent_Identity=29.7674418604651, Blast_Score=87, Evalue=6e-18,
Organism=Caenorhabditis elegans, GI17560332, Length=283, Percent_Identity=25.4416961130742, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI72000259, Length=277, Percent_Identity=26.3537906137184, Blast_Score=87, Evalue=7e-18,
Organism=Caenorhabditis elegans, GI17531453, Length=267, Percent_Identity=27.7153558052434, Blast_Score=87, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17564282, Length=197, Percent_Identity=30.4568527918782, Blast_Score=84, Evalue=6e-17,
Organism=Caenorhabditis elegans, GI17562910, Length=273, Percent_Identity=25.6410256410256, Blast_Score=82, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI115534694, Length=254, Percent_Identity=28.3464566929134, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI17551412, Length=272, Percent_Identity=26.8382352941176, Blast_Score=79, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17538480, Length=273, Percent_Identity=28.2051282051282, Blast_Score=78, Evalue=4e-15,
Organism=Caenorhabditis elegans, GI17538486, Length=270, Percent_Identity=25.9259259259259, Blast_Score=77, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17567345, Length=198, Percent_Identity=26.7676767676768, Blast_Score=76, Evalue=1e-14,
Organism=Caenorhabditis elegans, GI17565030, Length=268, Percent_Identity=25, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI17536651, Length=262, Percent_Identity=25.9541984732824, Blast_Score=67, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6322861, Length=205, Percent_Identity=33.6585365853659, Blast_Score=94, Evalue=2e-20,
Organism=Saccharomyces cerevisiae, GI6324126, Length=261, Percent_Identity=27.5862068965517, Blast_Score=83, Evalue=5e-17,
Organism=Saccharomyces cerevisiae, GI6323882, Length=214, Percent_Identity=28.9719626168224, Blast_Score=65, Evalue=1e-11,
Organism=Drosophila melanogaster, GI24644339, Length=260, Percent_Identity=31.5384615384615, Blast_Score=112, Evalue=2e-25,
Organism=Drosophila melanogaster, GI24639444, Length=259, Percent_Identity=28.957528957529, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI23397609, Length=253, Percent_Identity=32.4110671936759, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI17737361, Length=257, Percent_Identity=31.1284046692607, Blast_Score=94, Evalue=6e-20,
Organism=Drosophila melanogaster, GI21355319, Length=261, Percent_Identity=26.4367816091954, Blast_Score=92, Evalue=5e-19,
Organism=Drosophila melanogaster, GI28571526, Length=265, Percent_Identity=28.6792452830189, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI24644337, Length=258, Percent_Identity=34.8837209302326, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI21357041, Length=264, Percent_Identity=28.7878787878788, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI221331218, Length=209, Percent_Identity=29.1866028708134, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24665243, Length=210, Percent_Identity=29.0476190476191, Blast_Score=85, Evalue=5e-17,
Organism=Drosophila melanogaster, GI24665247, Length=211, Percent_Identity=28.9099526066351, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI221331216, Length=210, Percent_Identity=29.0476190476191, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24643142, Length=251, Percent_Identity=27.0916334661355, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI18859837, Length=195, Percent_Identity=32.8205128205128, Blast_Score=81, Evalue=8e-16,
Organism=Drosophila melanogaster, GI24648693, Length=218, Percent_Identity=27.5229357798165, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI21355889, Length=218, Percent_Identity=27.5229357798165, Blast_Score=77, Evalue=8e-15,
Organism=Drosophila melanogaster, GI24581726, Length=216, Percent_Identity=32.4074074074074, Blast_Score=77, Evalue=1e-14,
Organism=Drosophila melanogaster, GI17647419, Length=226, Percent_Identity=24.7787610619469, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI281364892, Length=201, Percent_Identity=30.8457711442786, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355631, Length=228, Percent_Identity=28.9473684210526, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI24640492, Length=202, Percent_Identity=28.7128712871287, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI24665264, Length=200, Percent_Identity=30, Blast_Score=70, Evalue=1e-12,
Organism=Drosophila melanogaster, GI24665268, Length=226, Percent_Identity=26.9911504424779, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI21358495, Length=232, Percent_Identity=25.8620689655172, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281364494, Length=249, Percent_Identity=24.4979919678715, Blast_Score=68, Evalue=5e-12,
Organism=Drosophila melanogaster, GI221510726, Length=204, Percent_Identity=30.8823529411765, Blast_Score=68, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 26576; Mature: 26445

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGRFDGATVLITGAAGGLGRGAAKGFASEGARLVLSDIDEKALADLAATLPAETAILAGN
CCCCCCEEEEEEECCCCCCCHHHHCHHHCCCEEEEHHCCHHHHHHHHHHCCCCHHEEECC
VADEKLSEDLVRLAVEKFGRLDVTVNNAGIVQSFVRLPQVPSDEARRVLEIDLLGVFYAM
CHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
KHQIPQMERQFRATAKGGAIVNIASVAGLVGAPKLSVYAAAKHGVVGLTKSAAAEYATKG
HHHCHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHCC
VRINAICPAHTRTAMVDSFVRASGAPEAEALAELTRGVPMKRVAEVDEITTAILFAADPA
EEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCC
NSFMTGHALAVDGGVGAI
CCHHCCCEEEECCCCCCC
>Mature Secondary Structure 
GRFDGATVLITGAAGGLGRGAAKGFASEGARLVLSDIDEKALADLAATLPAETAILAGN
CCCCCEEEEEEECCCCCCCHHHHCHHHCCCEEEEHHCCHHHHHHHHHHCCCCHHEEECC
VADEKLSEDLVRLAVEKFGRLDVTVNNAGIVQSFVRLPQVPSDEARRVLEIDLLGVFYAM
CHHHHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
KHQIPQMERQFRATAKGGAIVNIASVAGLVGAPKLSVYAAAKHGVVGLTKSAAAEYATKG
HHHCHHHHHHHHHHCCCCCEEEHHHHHHHCCCCCCEEEEECCCCEEEEHHHHHHHHHHCC
VRINAICPAHTRTAMVDSFVRASGAPEAEALAELTRGVPMKRVAEVDEITTAILFAADPA
EEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHEEEEEEECCC
NSFMTGHALAVDGGVGAI
CCHHCCCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10360571 [H]