Click here to switch to the map view.

The map label for this gene is 13472701

Identifier: 13472701

GI number: 13472701

Start: 2480582

End: 2481409

Strand: Direct

Name: 13472701

Synonym: mlr3078

Alternate gene names: NA

Gene position: 2480582-2481409 (Clockwise)

Preceding gene: 13472688

Following gene: 13472703

Centisome position: 35.26

GC content: 65.46

Gene sequence:

>828_bases
ATGATTTCCAGCATTGCCGAACTGATCGCCGACCGCATCGGCACGATGCCGGCCGGCGAACGGCGCGCGGCCCAGACGCT
GATCGCCAGCTATCCGATGATCGGCCTGAAGACGGTCGCCGAATTCTCGACGGCGGCCGGCGTCTCCTCGCCGACGATCC
TGCGTTTCGTGGCCCGGCTCGGCTTCCAGAATTATCCGGAGTTCCAGTCGAGCCTGCAGGACGAACTGGCGGCGCAGCTG
CAGTCGCCGGCGATACGCACGCTCAACCCGCCCTCGCCCGGTGGCGGCACGGTCTCGCCGATGCTGGAAGCGACGCTCGA
CAATATGCGCGAGACCTTCCGCCACCTCTCCGACAAGCAGTTGGCGGACATCGCCACACGGCTTGCCGACCGGCGTGGCA
AGACATTCCTCATCGGCGGCCGCTTCACCGATCCGCTGGCGCGTTACATGGCCGCCCACCTCGCCGTTATCCAGCCCGAT
GTCTTTCACCTCGCCGGACAGGAGAGCATGTGGCGCGACCGGCTGATCGACATGGGCAAGCGCGACGTGCTGGTGATCTT
CGACATCAGGCGCTACCAGGACAGCCTCGTCCGCTTTGCCGAGAAGGCGCATCAGCGCGGCGTCCAGATCGTGCTGTTCA
CCGATCAGTGGCTGTCGCCGATTGCCCGCTTTGCCCGCCATGTCATCGCCGGACGCACGGCAGTACCGTCGGCATGGGAT
TCCTCGGCTGCCCTGTTCGTCGTCGCCGAAACGCTGATCGGTGCCGTCACAAGGCAACTGGAAGCCGACGGCGCCAAACG
CATCCGCGAGATGGAAAGTCTGCGCTAG

Upstream 100 bases:

>100_bases
TACGTATTTTGCCTCATTGCGTCCCTACGGATGATTTCATACAGTTTACCCGGCTTTGTCAAATGCGATCTCATGGGCCA
GGCCAAGGGGTGGGGAAAAG

Downstream 100 bases:

>100_bases
ATCCTCGTTCTTGTCGGATTGGTGGCCGCCGGGGCGGTGCGCGCCGGCGGACCGAGGCCGTGGCCGGGCCAAGTTGCGGT
CGGCACGATCAGGCGATCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Transcriptional Regulator RpiR Family; Transcriptional Regulator; SIS Domain Protein; RpiR Family Regulatory; SIS Domain-Containing Protein; N-Acylmannosamine Kinase; Transcriptional Regulator Protein RpiR Family; RpiR-Family Transcriptional Regulator; Transcriptional Regulator RpiR Family SIS Domain; Transcriptional Regulator Rpir Family; Helix-Turn-Helix Protein RpiR; N-Acetylmannosamine Kinase; Transcription Regulator RpiR Family; HTH Transcriptional Regulator Sugar Isomerasedomain; Transcriptional Regulator Protein; Transcriptional Regulator Family Protein; HTH/SIS Domain-Containing Protein; Helix-Turn-Helix Domain RpiR Family; RpiR Family Transcription Regulator

Number of amino acids: Translated: 275; Mature: 275

Protein sequence:

>275_residues
MISSIAELIADRIGTMPAGERRAAQTLIASYPMIGLKTVAEFSTAAGVSSPTILRFVARLGFQNYPEFQSSLQDELAAQL
QSPAIRTLNPPSPGGGTVSPMLEATLDNMRETFRHLSDKQLADIATRLADRRGKTFLIGGRFTDPLARYMAAHLAVIQPD
VFHLAGQESMWRDRLIDMGKRDVLVIFDIRRYQDSLVRFAEKAHQRGVQIVLFTDQWLSPIARFARHVIAGRTAVPSAWD
SSAALFVVAETLIGAVTRQLEADGAKRIREMESLR

Sequences:

>Translated_275_residues
MISSIAELIADRIGTMPAGERRAAQTLIASYPMIGLKTVAEFSTAAGVSSPTILRFVARLGFQNYPEFQSSLQDELAAQL
QSPAIRTLNPPSPGGGTVSPMLEATLDNMRETFRHLSDKQLADIATRLADRRGKTFLIGGRFTDPLARYMAAHLAVIQPD
VFHLAGQESMWRDRLIDMGKRDVLVIFDIRRYQDSLVRFAEKAHQRGVQIVLFTDQWLSPIARFARHVIAGRTAVPSAWD
SSAALFVVAETLIGAVTRQLEADGAKRIREMESLR
>Mature_275_residues
MISSIAELIADRIGTMPAGERRAAQTLIASYPMIGLKTVAEFSTAAGVSSPTILRFVARLGFQNYPEFQSSLQDELAAQL
QSPAIRTLNPPSPGGGTVSPMLEATLDNMRETFRHLSDKQLADIATRLADRRGKTFLIGGRFTDPLARYMAAHLAVIQPD
VFHLAGQESMWRDRLIDMGKRDVLVIFDIRRYQDSLVRFAEKAHQRGVQIVLFTDQWLSPIARFARHVIAGRTAVPSAWD
SSAALFVVAETLIGAVTRQLEADGAKRIREMESLR

Specific function: Unknown

COG id: COG1737

COG function: function code K; Transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 30435; Mature: 30435

Theoretical pI: Translated: 10.08; Mature: 10.08

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISSIAELIADRIGTMPAGERRAAQTLIASYPMIGLKTVAEFSTAAGVSSPTILRFVARL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GFQNYPEFQSSLQDELAAQLQSPAIRTLNPPSPGGGTVSPMLEATLDNMRETFRHLSDKQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
LADIATRLADRRGKTFLIGGRFTDPLARYMAAHLAVIQPDVFHLAGQESMWRDRLIDMGK
HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCC
RDVLVIFDIRRYQDSLVRFAEKAHQRGVQIVLFTDQWLSPIARFARHVIAGRTAVPSAWD
CCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC
SSAALFVVAETLIGAVTRQLEADGAKRIREMESLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MISSIAELIADRIGTMPAGERRAAQTLIASYPMIGLKTVAEFSTAAGVSSPTILRFVARL
CHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH
GFQNYPEFQSSLQDELAAQLQSPAIRTLNPPSPGGGTVSPMLEATLDNMRETFRHLSDKQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
LADIATRLADRRGKTFLIGGRFTDPLARYMAAHLAVIQPDVFHLAGQESMWRDRLIDMGK
HHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHCCC
RDVLVIFDIRRYQDSLVRFAEKAHQRGVQIVLFTDQWLSPIARFARHVIAGRTAVPSAWD
CCEEEEEEHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHCCCCCCCCCC
SSAALFVVAETLIGAVTRQLEADGAKRIREMESLR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA