| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472695
Identifier: 13472695
GI number: 13472695
Start: 2472575
End: 2473681
Strand: Reverse
Name: 13472695
Synonym: mll3069
Alternate gene names: NA
Gene position: 2473681-2472575 (Counterclockwise)
Preceding gene: 13472696
Following gene: 13472694
Centisome position: 35.16
GC content: 63.6
Gene sequence:
>1107_bases ATGTTCAAATTCACGGGGAAGGTGCTTTCCCTCTCGGCCGCGACCCTTATGGTGTCGTCGGTGATTTCGTCCGCGGCTTC GCTGGACGATCTCGTCAAGGCCGCGAAGGCTGAAGGCCAGCTCACCACCATCGCGCTGCCGCATGACTGGTGCGGTTACG GCGACGTCATCGCCGGCTTCAAGGCGAAGTATCCGGAAATCACCATCAACGAGCTCAACCCCGATGCCGGCTCCGGCGAC GAGGTCGAGGCGATCAAGGCCAACAAGGACAACAAGGGCCCGCAGGCTCCCGACGTCATCGACGTCGGCCTGTCTTTCGG TCCGTCCGCCAAGAAGGACGGTCTGATCCAGGCTTACAAGGTGTCGACCTGGGACTCGATCCCCGACACCGCCAAGGACG CCGACGGCTTCTGGACGGGCGATTACTACGGTGTGCTTTCCTTCCAGGTGAACAAGGACCTGGTGAAGGTTTCGCCGACG GACTGGGCCGACCTGCTGAAGCCGGAATTCGCCAACTCGGTCGCACTTGCCGGTGATCCGCGCGCTTCGAACCAGGCCAT CCAGGCGGTCTACGCCGCCGGCCTTTCCGGTGGTGCGGCAGCTGGCGAAGCCGCCGGCACGGCTGGCCTCGACTTCTTCA AGAAACTCAACGCCGCTGGCAATTTCGTGCCGGTCATTGGCAAGGCCGCGACGCTGGCCCAGGGCCAGACCCCGATCCTC GTCACCTGGGACTACAATGCGCTCGCCGGTCGCGACACGCTGAAGGGCAACCCGCCCGTCGACGTCGTCGTGCCGAAGAC AGGTGTCGTCGCCGGTGTCTACGTGCAGGCAATCAGCGCCTTCGCGCCGCACCCGAATGCGGCCAAGCTCTGGCTGGAAT ACCTGTATTCCGACGAAGGCCAGATCGCCTGGCTGAAGGGCTATTGCCACCCGATCCGCTTCAACGATCTGGCCAAGAAC GGCAAGATCCCGGCGGACGTGCTGGCCAAGCTGCCGCCTGCTGAGTCCTATGCGGCAGCGGTGTTCCCGACGCTCGACGA GCAGGGCAAGGCCAAGGAAGCCATCACCAAGAACTGGGACGCCGTTGTCGGCGCCAACGTTAAGTAA
Upstream 100 bases:
>100_bases GCTGCCGGCCAATGGTTTCATAAAGCTTTCATCTGGCTGTCACATCAAAACGATACCGCATCGCAGGCGTCCAACGGCGT CAGTTCAACGGAGAGAACAC
Downstream 100 bases:
>100_bases CAGTTGAAATCACCGGGTGGCTTCACGGCCGCCCGGTTTTTCTCTCAAAGTCTTTCTCTCGAAGACGGTAGCCGGCGCAT GACCGATATCTCAATGTCCG
Product: ABC transporter, periplasmic binding protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MFKFTGKVLSLSAATLMVSSVISSAASLDDLVKAAKAEGQLTTIALPHDWCGYGDVIAGFKAKYPEITINELNPDAGSGD EVEAIKANKDNKGPQAPDVIDVGLSFGPSAKKDGLIQAYKVSTWDSIPDTAKDADGFWTGDYYGVLSFQVNKDLVKVSPT DWADLLKPEFANSVALAGDPRASNQAIQAVYAAGLSGGAAAGEAAGTAGLDFFKKLNAAGNFVPVIGKAATLAQGQTPIL VTWDYNALAGRDTLKGNPPVDVVVPKTGVVAGVYVQAISAFAPHPNAAKLWLEYLYSDEGQIAWLKGYCHPIRFNDLAKN GKIPADVLAKLPPAESYAAAVFPTLDEQGKAKEAITKNWDAVVGANVK
Sequences:
>Translated_368_residues MFKFTGKVLSLSAATLMVSSVISSAASLDDLVKAAKAEGQLTTIALPHDWCGYGDVIAGFKAKYPEITINELNPDAGSGD EVEAIKANKDNKGPQAPDVIDVGLSFGPSAKKDGLIQAYKVSTWDSIPDTAKDADGFWTGDYYGVLSFQVNKDLVKVSPT DWADLLKPEFANSVALAGDPRASNQAIQAVYAAGLSGGAAAGEAAGTAGLDFFKKLNAAGNFVPVIGKAATLAQGQTPIL VTWDYNALAGRDTLKGNPPVDVVVPKTGVVAGVYVQAISAFAPHPNAAKLWLEYLYSDEGQIAWLKGYCHPIRFNDLAKN GKIPADVLAKLPPAESYAAAVFPTLDEQGKAKEAITKNWDAVVGANVK >Mature_368_residues MFKFTGKVLSLSAATLMVSSVISSAASLDDLVKAAKAEGQLTTIALPHDWCGYGDVIAGFKAKYPEITINELNPDAGSGD EVEAIKANKDNKGPQAPDVIDVGLSFGPSAKKDGLIQAYKVSTWDSIPDTAKDADGFWTGDYYGVLSFQVNKDLVKVSPT DWADLLKPEFANSVALAGDPRASNQAIQAVYAAGLSGGAAAGEAAGTAGLDFFKKLNAAGNFVPVIGKAATLAQGQTPIL VTWDYNALAGRDTLKGNPPVDVVVPKTGVVAGVYVQAISAFAPHPNAAKLWLEYLYSDEGQIAWLKGYCHPIRFNDLAKN GKIPADVLAKLPPAESYAAAVFPTLDEQGKAKEAITKNWDAVVGANVK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38574; Mature: 38574
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKFTGKVLSLSAATLMVSSVISSAASLDDLVKAAKAEGQLTTIALPHDWCGYGDVIAGF CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCC KAKYPEITINELNPDAGSGDEVEAIKANKDNKGPQAPDVIDVGLSFGPSAKKDGLIQAYK CCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEE VSTWDSIPDTAKDADGFWTGDYYGVLSFQVNKDLVKVSPTDWADLLKPEFANSVALAGDP ECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCHHHHHCHHHCCCEEECCCC RASNQAIQAVYAAGLSGGAAAGEAAGTAGLDFFKKLNAAGNFVPVIGKAATLAQGQTPIL CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCEE VTWDYNALAGRDTLKGNPPVDVVVPKTGVVAGVYVQAISAFAPHPNAAKLWLEYLYSDEG EEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC QIAWLKGYCHPIRFNDLAKNGKIPADVLAKLPPAESYAAAVFPTLDEQGKAKEAITKNWD CEEEEECCCCEECCCHHHCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHCCCC AVVGANVK EEECCCCC >Mature Secondary Structure MFKFTGKVLSLSAATLMVSSVISSAASLDDLVKAAKAEGQLTTIALPHDWCGYGDVIAGF CCEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCHHHHCC KAKYPEITINELNPDAGSGDEVEAIKANKDNKGPQAPDVIDVGLSFGPSAKKDGLIQAYK CCCCCEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCEEEEE VSTWDSIPDTAKDADGFWTGDYYGVLSFQVNKDLVKVSPTDWADLLKPEFANSVALAGDP ECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEECCCCHHHHHCHHHCCCEEECCCC RASNQAIQAVYAAGLSGGAAAGEAAGTAGLDFFKKLNAAGNFVPVIGKAATLAQGQTPIL CCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCHHHHCCCCCCEE VTWDYNALAGRDTLKGNPPVDVVVPKTGVVAGVYVQAISAFAPHPNAAKLWLEYLYSDEG EEECCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC QIAWLKGYCHPIRFNDLAKNGKIPADVLAKLPPAESYAAAVFPTLDEQGKAKEAITKNWD CEEEEECCCCEECCCHHHCCCCCCHHHHHCCCCCCCCCEEEECCCCCCCCHHHHHHCCCC AVVGANVK EEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA