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The map label for this gene is potC [C]

Identifier: 13472693

GI number: 13472693

Start: 2470794

End: 2471594

Strand: Reverse

Name: potC [C]

Synonym: mll3067

Alternate gene names: 13472693

Gene position: 2471594-2470794 (Counterclockwise)

Preceding gene: 13472694

Following gene: 13472692

Centisome position: 35.13

GC content: 61.55

Gene sequence:

>801_bases
GTGGCTGAAATGAAGTCGGGAAAGTTCTGGGCCTGGATCGTTTTCGCGCTGGGTGCGGCCTATTTCTTCATCCCGCTGAT
CGCGACGGTGGAGTTCTCCATGCGTATGCGGCGCGGCGTCTATTCCTTTGACGCCTACAAGGTCGTGCTGGGCGATGCAC
GCTTCCAGGCTTCGTTCGGCTATTCGGTGCTTGCCGCCGTTTTCACCATCATTCTCGGCGTGCTGATCGTCGTGCCCGCC
GCCTACTGGATTCGGCTGCGCCTGCCACAGCTGCGCCCAATCGTCGAGTTCATCACGCTGCTGCCGCTGGTTATCCCGGC
AATCGTCATCGTCTTCGGCTATATCAGAATGTACGGATCGAATTCGCCGCTGCCGTTCCTGGCAAGCGACGCCGGTACGA
ACGCCCTGCTGGTCATCGGCTATGCCACGCTGTCGCTGCCCTATATGTACCGTGCGGTCGACACCGGGCTTAGGACCATT
GACGTGCGGACGCTGACGGAGGCGGCGCAGATCCTTGGCGCCGGCTGGTCGACGATCATCACGCGCGTTATCCTGCCCAA
CGTGCTGATCGCGGTGTTGTCGGGTGCGTTCCTGACCTTCGCGATCGTCATTGGCGAGTTCACCATGGCCAGCCTGCTCA
ATCGGCCCGCCTTTGGTCCTTATCTGCAGAACATCGGCGCCAACCGCGCCTATGAGCCGGCAGCCCTTGCCATCATAGCT
TTCGCCATCACCTGGGGCTGCATGTCGCTGATCCAGATCCTGTCCCGCTTCGCGCCGCGCTCGGCGAACCGCCCCAATTG
A

Upstream 100 bases:

>100_bases
TGCACAATGCCCATCTTGGCTATGCGATCGCCTTCGGCATGATCTTCATCACCGGCCTGGCCAATGTCTTCTACATCTGG
TTCCGGACCCGTTCCGAGAG

Downstream 100 bases:

>100_bases
TCGAAAAGTACTGATCGAAAGAACAACACCATGGCCGATCCGTTTCTCTCCATCCAGCACGTGCGAAAATCCTTCGGTGC
CACCACGGTGGTGGAGGATT

Product: ABC transporter, permease protein

Products: Phosphate; putrescine [Cytoplasm]; ADP; spermidine [Cytoplasm] [C]

Alternate protein names: ABC Transporter Permease; Permease Of ABC Transporter; Transmembrane Component Of ABC Transporter; ABC Transporter; ABC-Type Transporter Permease Component; ABC-Type Transport System Permease Protein; Polyamine ABC Transporter Permease Protein; Molybdate Transport System Permease Protein; ABC Transporter Inner Membrane Subunit; ABC Transporter Membrane Protein; ABC Polyamine Transporter Inner Membrane Subunit; Sulfate ABC Transporter Inner Membrane Subunit CysT; ABC Transport System Permease Protein; Spermidine/Putrescine ABC Transporter Permease Component; ABC Transporter Integral Membrane Subunit; ABC Transporter Inner Membrane Protein; ABC Transport System Permease Component; Abc Transporter Permease Fn; ABC Transporter Membrane Spanning Protein; ABC Transporter, Permease Component Fragment; ABC Transporter Permease Component; Sulfate-Transport Membrane Protein ABC Transporter CysT; Molybdenum ABC Transporter Permease Protein

Number of amino acids: Translated: 266; Mature: 265

Protein sequence:

>266_residues
MAEMKSGKFWAWIVFALGAAYFFIPLIATVEFSMRMRRGVYSFDAYKVVLGDARFQASFGYSVLAAVFTIILGVLIVVPA
AYWIRLRLPQLRPIVEFITLLPLVIPAIVIVFGYIRMYGSNSPLPFLASDAGTNALLVIGYATLSLPYMYRAVDTGLRTI
DVRTLTEAAQILGAGWSTIITRVILPNVLIAVLSGAFLTFAIVIGEFTMASLLNRPAFGPYLQNIGANRAYEPAALAIIA
FAITWGCMSLIQILSRFAPRSANRPN

Sequences:

>Translated_266_residues
MAEMKSGKFWAWIVFALGAAYFFIPLIATVEFSMRMRRGVYSFDAYKVVLGDARFQASFGYSVLAAVFTIILGVLIVVPA
AYWIRLRLPQLRPIVEFITLLPLVIPAIVIVFGYIRMYGSNSPLPFLASDAGTNALLVIGYATLSLPYMYRAVDTGLRTI
DVRTLTEAAQILGAGWSTIITRVILPNVLIAVLSGAFLTFAIVIGEFTMASLLNRPAFGPYLQNIGANRAYEPAALAIIA
FAITWGCMSLIQILSRFAPRSANRPN
>Mature_265_residues
AEMKSGKFWAWIVFALGAAYFFIPLIATVEFSMRMRRGVYSFDAYKVVLGDARFQASFGYSVLAAVFTIILGVLIVVPAA
YWIRLRLPQLRPIVEFITLLPLVIPAIVIVFGYIRMYGSNSPLPFLASDAGTNALLVIGYATLSLPYMYRAVDTGLRTID
VRTLTEAAQILGAGWSTIITRVILPNVLIAVLSGAFLTFAIVIGEFTMASLLNRPAFGPYLQNIGANRAYEPAALAIIAF
AITWGCMSLIQILSRFAPRSANRPN

Specific function: Required For The Activity Of The Bacterial Periplasmic Transport System Of Putrescine And Spermidine. [C]

COG id: COG1177

COG function: function code E; ABC-type spermidine/putrescine transport system, permease component II

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29175; Mature: 29044

Theoretical pI: Translated: 10.16; Mature: 10.16

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEMKSGKFWAWIVFALGAAYFFIPLIATVEFSMRMRRGVYSFDAYKVVLGDARFQASFG
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHCC
YSVLAAVFTIILGVLIVVPAAYWIRLRLPQLRPIVEFITLLPLVIPAIVIVFGYIRMYGS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NSPLPFLASDAGTNALLVIGYATLSLPYMYRAVDTGLRTIDVRTLTEAAQILGAGWSTII
CCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHH
TRVILPNVLIAVLSGAFLTFAIVIGEFTMASLLNRPAFGPYLQNIGANRAYEPAALAIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHH
FAITWGCMSLIQILSRFAPRSANRPN
HHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AEMKSGKFWAWIVFALGAAYFFIPLIATVEFSMRMRRGVYSFDAYKVVLGDARFQASFG
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHCC
YSVLAAVFTIILGVLIVVPAAYWIRLRLPQLRPIVEFITLLPLVIPAIVIVFGYIRMYGS
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NSPLPFLASDAGTNALLVIGYATLSLPYMYRAVDTGLRTIDVRTLTEAAQILGAGWSTII
CCCCCEEECCCCCCEEEEEEHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCHHHHH
TRVILPNVLIAVLSGAFLTFAIVIGEFTMASLLNRPAFGPYLQNIGANRAYEPAALAIIA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCHHHHHHHH
FAITWGCMSLIQILSRFAPRSANRPN
HHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Putrescine [Periplasm]; H2O; ATP; spermidine [Periplasm] [C]

Specific reaction: ATP + putrescine [Periplasm] + H2O = ADP + phosphate + putrescine [Cytoplasm] ATP + spermidine [Periplasm] + H2O = ADP + phosphate + spermidine [Cytoplasm] [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA