| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472673
Identifier: 13472673
GI number: 13472673
Start: 2447752
End: 2448594
Strand: Reverse
Name: 13472673
Synonym: mll3043
Alternate gene names: NA
Gene position: 2448594-2447752 (Counterclockwise)
Preceding gene: 13472674
Following gene: 13472671
Centisome position: 34.8
GC content: 57.77
Gene sequence:
>843_bases ATGATTGACAACGCACGCGTGCGATTTCGGGAGGCCGCGCTGTCGATGAAGCTGAGGATTTCCATCGTTTTCGCGGGTTT GCTGGCGGCATTTCCCGTATCCGCTGCGCAAGGCGGTGACGGCGTCGATCAGGCCGCGGCCAAGGCGGCCCTGCTCGAAG CCTATCCCGGTCTTTTCACCATCTCGGGCAACACGCTGACGTGGTCGGATGGTGCCACGATGGTGTGGGACGATGGCAAG GCACGCACGCCTGAGGACCTGATCAAGTCCCCCGATATCGAGGACATGTTCCACTACGTCTATCCGACGGTCAGTGCCGG CGACCTTGTCCCTGATGTGGATTTCGATCCCGGTCGTGTTCGCAACGAGGCCTTTTTCAAGAAACTTTATGGCGCCAGTG CTGCAGCGGTGGGCAAACACGTAACGAGCATCAAATGGCTGCCAAAACTGGGCATGTATCCGGTTCGAGTAAGTTCACTC TTCGATATCGATACGCGCCTCGCTAAGATCTCGAATGCCTTGCAAGACATGCCGGCCGACACAAGCCGCTACGGTCTCAA GCCGGGCGGCGGGTTCAACTGGCGGGCCATCGCCGGCACGGACCAACTCAGCGTCCATTCCTTCGGCGCCGCATTCGACA TCAATGTCGGTTATTCCGACTATTGGTTCTGGAGCAAGCCCGACGCCAAGGGCCGGATCCCGTTCAAGAACCGCATACCC TTGTCGATCGTCGCGCTGTTTGAAAAGCAGGGTTTTATCTGGGGCGGACGCTGGTACCACTACGACACCATGCATTTCGA ATATCGGCCTGAATTGCTGATCTACAGTAAGAAGCAGGGATAG
Upstream 100 bases:
>100_bases ATCCGGACTTGGCGGTTGCCAGGATGAAGGGTCTCTGCGCCGTTGCGGGTATCCCGCAATAATCTGGGCTCGTGCCTGAT CCATAGTCCTCTTTTCGTCT
Downstream 100 bases:
>100_bases CCGACCCCTTGGATGCCTCACCGACGGAATTTCAGCGCAATGTGTCGATTGTTTGGTTTGGATGGTGGGCGTGACAGGGA TTGAACCTGTGACCCCTGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MIDNARVRFREAALSMKLRISIVFAGLLAAFPVSAAQGGDGVDQAAAKAALLEAYPGLFTISGNTLTWSDGATMVWDDGK ARTPEDLIKSPDIEDMFHYVYPTVSAGDLVPDVDFDPGRVRNEAFFKKLYGASAAAVGKHVTSIKWLPKLGMYPVRVSSL FDIDTRLAKISNALQDMPADTSRYGLKPGGGFNWRAIAGTDQLSVHSFGAAFDINVGYSDYWFWSKPDAKGRIPFKNRIP LSIVALFEKQGFIWGGRWYHYDTMHFEYRPELLIYSKKQG
Sequences:
>Translated_280_residues MIDNARVRFREAALSMKLRISIVFAGLLAAFPVSAAQGGDGVDQAAAKAALLEAYPGLFTISGNTLTWSDGATMVWDDGK ARTPEDLIKSPDIEDMFHYVYPTVSAGDLVPDVDFDPGRVRNEAFFKKLYGASAAAVGKHVTSIKWLPKLGMYPVRVSSL FDIDTRLAKISNALQDMPADTSRYGLKPGGGFNWRAIAGTDQLSVHSFGAAFDINVGYSDYWFWSKPDAKGRIPFKNRIP LSIVALFEKQGFIWGGRWYHYDTMHFEYRPELLIYSKKQG >Mature_280_residues MIDNARVRFREAALSMKLRISIVFAGLLAAFPVSAAQGGDGVDQAAAKAALLEAYPGLFTISGNTLTWSDGATMVWDDGK ARTPEDLIKSPDIEDMFHYVYPTVSAGDLVPDVDFDPGRVRNEAFFKKLYGASAAAVGKHVTSIKWLPKLGMYPVRVSSL FDIDTRLAKISNALQDMPADTSRYGLKPGGGFNWRAIAGTDQLSVHSFGAAFDINVGYSDYWFWSKPDAKGRIPFKNRIP LSIVALFEKQGFIWGGRWYHYDTMHFEYRPELLIYSKKQG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31065; Mature: 31065
Theoretical pI: Translated: 9.05; Mature: 9.05
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDNARVRFREAALSMKLRISIVFAGLLAAFPVSAAQGGDGVDQAAAKAALLEAYPGLFT CCCCCHHHHHHHHHCEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE ISGNTLTWSDGATMVWDDGKARTPEDLIKSPDIEDMFHYVYPTVSAGDLVPDVDFDPGRV EECCEEEECCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCH RNEAFFKKLYGASAAAVGKHVTSIKWLPKLGMYPVRVSSLFDIDTRLAKISNALQDMPAD HHHHHHHHHHCCCHHHHHHHHHHEEEHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCC TSRYGLKPGGGFNWRAIAGTDQLSVHSFGAAFDINVGYSDYWFWSKPDAKGRIPFKNRIP CHHCCCCCCCCCCEEEECCCCCEEEEECCCEEEEECCCCCCEEECCCCCCCCCCCCCCCC LSIVALFEKQGFIWGGRWYHYDTMHFEYRPELLIYSKKQG EEEEEEEHHCCCEECCEEEEEEEEEEEECCCEEEEECCCC >Mature Secondary Structure MIDNARVRFREAALSMKLRISIVFAGLLAAFPVSAAQGGDGVDQAAAKAALLEAYPGLFT CCCCCHHHHHHHHHCEEEEHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCEEE ISGNTLTWSDGATMVWDDGKARTPEDLIKSPDIEDMFHYVYPTVSAGDLVPDVDFDPGRV EECCEEEECCCCEEEECCCCCCCHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCH RNEAFFKKLYGASAAAVGKHVTSIKWLPKLGMYPVRVSSLFDIDTRLAKISNALQDMPAD HHHHHHHHHHCCCHHHHHHHHHHEEEHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHCCCC TSRYGLKPGGGFNWRAIAGTDQLSVHSFGAAFDINVGYSDYWFWSKPDAKGRIPFKNRIP CHHCCCCCCCCCCEEEECCCCCEEEEECCCEEEEECCCCCCEEECCCCCCCCCCCCCCCC LSIVALFEKQGFIWGGRWYHYDTMHFEYRPELLIYSKKQG EEEEEEEHHCCCEECCEEEEEEEEEEEECCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA