| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472646
Identifier: 13472646
GI number: 13472646
Start: 2415316
End: 2415963
Strand: Direct
Name: 13472646
Synonym: mlr3010
Alternate gene names: NA
Gene position: 2415316-2415963 (Clockwise)
Preceding gene: 13472645
Following gene: 13472648
Centisome position: 34.33
GC content: 65.43
Gene sequence:
>648_bases GTGGTGGGCGCCGAGAACCACCCAGCTTTACCTTCGGCTCTTGCCGATGCGCCGCTGGTCGCGGCTTCTCTGCTGGTCCA GGAAGACCTGATCCTGATGCGTCGCGACGACAGCGGCTGGCGGCTAGCGGCGGGTTCGTTATGCTTCCCCTCGTCCTGGT CGCTGCTCGAAAAATTCGGCAAGCCGTTGCAGCAGATCCACGAGCCCGTGCCGGGCTTCGGTCCGGGAACGCGTCCCGCC GAACTGATCAACCGCATGTTCGACGGCCTGCAGGGCCAGGCGGTCGAACGCTTCAACTGGTCGATCCAGGCCGACAATGC GCTCTATCATCCACTGTCCAACGTCGAGCGCATCGACCGCGCCACCAACCGGCCGTCGCGCTTCCCCGATGGTGACGTCA GGGCGCACGCCTTCATCCGCGTCGAGCGGCAGACGCTGCGCAAGCTGCCGTCCTCACGCGACATCCTGTTCACCATCCGC ATCCATCTCGACCCGCTCGCCGTGCTGGCGTGGCACCCGGACCGGGCGACGCTCGCACTGTCCTTTGCCGCCCAGCTCGA AGCGCTGGATCTCGACCAGCTCGACTACAAGGGCCTGACATCGGACCGCGACCGGCTGATCGAACATTTGAAGACGATGG CACGCTGA
Upstream 100 bases:
>100_bases CGGCACGCGGAAAGCCCAGCGGGAAGTGCTCGACTTGCTCGGCTCCTATCTGCCGGAGCAGTTTATGCACACCCATCGCC GCACCGATGCGGGCATCGAG
Downstream 100 bases:
>100_bases GCCGCGCTACAGGCTGCCGGCCAGGAACTCGACGAATGTTCTTGCCCTGGCGCTCGCCTTGCGTCCGGCCGGAAACAGCG CCCACAGTTCAACCGGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 215; Mature: 215
Protein sequence:
>215_residues MVGAENHPALPSALADAPLVAASLLVQEDLILMRRDDSGWRLAAGSLCFPSSWSLLEKFGKPLQQIHEPVPGFGPGTRPA ELINRMFDGLQGQAVERFNWSIQADNALYHPLSNVERIDRATNRPSRFPDGDVRAHAFIRVERQTLRKLPSSRDILFTIR IHLDPLAVLAWHPDRATLALSFAAQLEALDLDQLDYKGLTSDRDRLIEHLKTMAR
Sequences:
>Translated_215_residues MVGAENHPALPSALADAPLVAASLLVQEDLILMRRDDSGWRLAAGSLCFPSSWSLLEKFGKPLQQIHEPVPGFGPGTRPA ELINRMFDGLQGQAVERFNWSIQADNALYHPLSNVERIDRATNRPSRFPDGDVRAHAFIRVERQTLRKLPSSRDILFTIR IHLDPLAVLAWHPDRATLALSFAAQLEALDLDQLDYKGLTSDRDRLIEHLKTMAR >Mature_215_residues MVGAENHPALPSALADAPLVAASLLVQEDLILMRRDDSGWRLAAGSLCFPSSWSLLEKFGKPLQQIHEPVPGFGPGTRPA ELINRMFDGLQGQAVERFNWSIQADNALYHPLSNVERIDRATNRPSRFPDGDVRAHAFIRVERQTLRKLPSSRDILFTIR IHLDPLAVLAWHPDRATLALSFAAQLEALDLDQLDYKGLTSDRDRLIEHLKTMAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24101; Mature: 24101
Theoretical pI: Translated: 6.90; Mature: 6.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVGAENHPALPSALADAPLVAASLLVQEDLILMRRDDSGWRLAAGSLCFPSSWSLLEKFG CCCCCCCCCCCHHHHCCHHHHHHHHHHHCEEEEEECCCCCEEEECCCCCCCCHHHHHHHC KPLQQIHEPVPGFGPGTRPAELINRMFDGLQGQAVERFNWSIQADNALYHPLSNVERIDR HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCEEEECCCHHCCHHHHHHHHH ATNRPSRFPDGDVRAHAFIRVERQTLRKLPSSRDILFTIRIHLDPLAVLAWHPDRATLAL HCCCCCCCCCCCCEEEHHEEEEHHHHHCCCCCCCEEEEEEEEECCEEEEEECCCCCEEEH SFAAQLEALDLDQLDYKGLTSDRDRLIEHLKTMAR HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC >Mature Secondary Structure MVGAENHPALPSALADAPLVAASLLVQEDLILMRRDDSGWRLAAGSLCFPSSWSLLEKFG CCCCCCCCCCCHHHHCCHHHHHHHHHHHCEEEEEECCCCCEEEECCCCCCCCHHHHHHHC KPLQQIHEPVPGFGPGTRPAELINRMFDGLQGQAVERFNWSIQADNALYHPLSNVERIDR HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHHCCEEEECCCHHCCHHHHHHHHH ATNRPSRFPDGDVRAHAFIRVERQTLRKLPSSRDILFTIRIHLDPLAVLAWHPDRATLAL HCCCCCCCCCCCCEEEHHEEEEHHHHHCCCCCCCEEEEEEEEECCEEEEEECCCCCEEEH SFAAQLEALDLDQLDYKGLTSDRDRLIEHLKTMAR HHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA