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The map label for this gene is yjbG [H]

Identifier: 13472641

GI number: 13472641

Start: 2409834

End: 2411672

Strand: Direct

Name: yjbG [H]

Synonym: mlr3002

Alternate gene names: 13472641

Gene position: 2409834-2411672 (Clockwise)

Preceding gene: 13472638

Following gene: 13472642

Centisome position: 34.25

GC content: 65.52

Gene sequence:

>1839_bases
ATGCGCATGATGTTTGGTCGGCGGCTTGCGGCACCGGCGTCCGGTCAGGGCACGGCCGAGCTTGGCGATCTGCCGGAATG
GAACCTTGCCGACCTCTATGCCGGCATGGAAGCGCCGGAACTGAAGCGGGACATCGCCAAAGCCGCCGCCGATGCGATCG
CCTTCGAGACCCGCTGGAAGGGAACGCTCGCCGCCGAGGCCGGGCGCGGCGGCGCCGGCAAGCTGGGCGAGGCGCTGGTC
GCCTACGAGGCGCTGGAGGAACTGATCGGCCGCATCGTCTCCTATGCCGGCCTGGTCTATGCCGGCAACACCGCCGATCC
GCAGCGCGCCAAGCTCTATGGCGACATCCAGGAGAAGATGACCGATGCCAGCGCGCATCTCCTGTTCTTCGCGCTCGAAC
TGAACCTGATCGACGACGCTGCGATCGAAAGCGCACTCACCAGCGATTCCGCTTTCGGCCACTACCGGCCCTGGGTGCTC
GACCTCAGAATGGACAAGCCCTACCAGCTCGAGGACCGCGTCGAGCAGCTTTTCCACGAGAAATCGATCACCGGACGCGG
CGCCTGGAACCGCCTGTTCGACGAGACGATGACCGACCTTCGCTTCGACGTCGAGGGCGAGGAACTGACGCTGGAGCCGG
CCCTCAATCGCCTGCAGGATGCCTATGGCGAAGTGCGCCGCCGCGCCTCCGAGGCGCTGGCCGCGACCTTCCGCAAGAAT
TTGCGCACCTTCACCCTGATCACCAACACGCTGGCCAAGGACAAGGAAATCTCGGACCGCTGGCGCGGCTTCGAGGACAT
TGCCGATTCCCGCCATCTCGCCAACCGTGTCGAGCGCGGCGTCGTCGACGCGCTCGCCACCGCGGTGCGCGAAGCCTATC
CGCGCCTGTCGCATCGCTACTACGCGATGAAGGCGCGCTGGCTCGGCATGGACGTGATGAACCACTGGGACCGCAACGCG
CCGCTGCCGGAAACGCCACAAGCGGTGATCGGCTGGGACGAAGCCAGGAACACCGTACTGTCCGCCTATCAACGCTTCTC
GCCCGAAATGGCCGAGATCGCGCGCACCTTCTTCGACCGCAACTGGATCGATGCGCCGGTGCGCCCGGGCAAATCGCCAG
GCGCCTTTGCCCATCCGACCGTGCCGTCGGCCCACCCCTATGTGCTGCTCAACTACATGGGCAAGCCGCGCGACGTGATG
ACGCTGGCGCACGAGCTTGGCCACGGCGTGCATCAGGTGCTGGCCGCCGGCCAGGGCGCGCTGATGGCCTCGACGCCACT
GACGCTGGCCGAGACGGCGTCCGTCTTCGGCGAGATGCTGACCTTCCGCTCGCTGCTGGAGCAGACCACCGACCGGCGCG
AGCGCAAGGCCATGCTCGCCCAGAAGGTCGAGGACATGATCAACACGGTGGTGCGCCAGATCGCCTTCTACGAATTCGAG
CGCAAGGTGCATGCCGAGCGCCGCAACGGCGAACTGACATCCGACAGGCTCGGCCAGTTCTGGCTGGAGGTGCAGGCCGA
AAGCCTCGGCCCGGCGATCAAGCTGCGCGAGGGATACGAGGTGTTCTGGACCTACATCCCGCACTTCATCCATTCGCCGT
TCTACGTCTATGCCTATGCGTTCGGCGACTGCCTGGTGAACTCGCTCTACGCGGTCTACCAGAACGCCGAGCGCGGTTTT
CAGGACAAGTATTTCGAGATGCTGCGCGCCGGCGGCACCAAGCATCATTCGCAGCTTCTGGCGCCCTTTGGGCTCGACGC
CACCGACCCCGCCTTCTGGCAGATCGGGCTCGGTGTCATCAGCGGCCTGATCGATGAACTGGAAACGCTCGACCGCTGA

Upstream 100 bases:

>100_bases
AATAAGGTTTCAAAAAACCCGGTGAACGAATTCCTTACGATTTGACCGGCTTGCCTGATCCCCTTGATTCTGACCCCATA
ATTCACAGAAGGTATTGTCG

Downstream 100 bases:

>100_bases
GACGCACCTCGCTTGCAAGAACAGTTTAGCCGGAATGCATGTTGGGACGGCACTGTTCTTTCGCTAAATATTTGTTCTTT
AAGAACTCTAGGCGGAAGTT

Product: oligoendopeptidase F

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 612; Mature: 612

Protein sequence:

>612_residues
MRMMFGRRLAAPASGQGTAELGDLPEWNLADLYAGMEAPELKRDIAKAAADAIAFETRWKGTLAAEAGRGGAGKLGEALV
AYEALEELIGRIVSYAGLVYAGNTADPQRAKLYGDIQEKMTDASAHLLFFALELNLIDDAAIESALTSDSAFGHYRPWVL
DLRMDKPYQLEDRVEQLFHEKSITGRGAWNRLFDETMTDLRFDVEGEELTLEPALNRLQDAYGEVRRRASEALAATFRKN
LRTFTLITNTLAKDKEISDRWRGFEDIADSRHLANRVERGVVDALATAVREAYPRLSHRYYAMKARWLGMDVMNHWDRNA
PLPETPQAVIGWDEARNTVLSAYQRFSPEMAEIARTFFDRNWIDAPVRPGKSPGAFAHPTVPSAHPYVLLNYMGKPRDVM
TLAHELGHGVHQVLAAGQGALMASTPLTLAETASVFGEMLTFRSLLEQTTDRRERKAMLAQKVEDMINTVVRQIAFYEFE
RKVHAERRNGELTSDRLGQFWLEVQAESLGPAIKLREGYEVFWTYIPHFIHSPFYVYAYAFGDCLVNSLYAVYQNAERGF
QDKYFEMLRAGGTKHHSQLLAPFGLDATDPAFWQIGLGVISGLIDELETLDR

Sequences:

>Translated_612_residues
MRMMFGRRLAAPASGQGTAELGDLPEWNLADLYAGMEAPELKRDIAKAAADAIAFETRWKGTLAAEAGRGGAGKLGEALV
AYEALEELIGRIVSYAGLVYAGNTADPQRAKLYGDIQEKMTDASAHLLFFALELNLIDDAAIESALTSDSAFGHYRPWVL
DLRMDKPYQLEDRVEQLFHEKSITGRGAWNRLFDETMTDLRFDVEGEELTLEPALNRLQDAYGEVRRRASEALAATFRKN
LRTFTLITNTLAKDKEISDRWRGFEDIADSRHLANRVERGVVDALATAVREAYPRLSHRYYAMKARWLGMDVMNHWDRNA
PLPETPQAVIGWDEARNTVLSAYQRFSPEMAEIARTFFDRNWIDAPVRPGKSPGAFAHPTVPSAHPYVLLNYMGKPRDVM
TLAHELGHGVHQVLAAGQGALMASTPLTLAETASVFGEMLTFRSLLEQTTDRRERKAMLAQKVEDMINTVVRQIAFYEFE
RKVHAERRNGELTSDRLGQFWLEVQAESLGPAIKLREGYEVFWTYIPHFIHSPFYVYAYAFGDCLVNSLYAVYQNAERGF
QDKYFEMLRAGGTKHHSQLLAPFGLDATDPAFWQIGLGVISGLIDELETLDR
>Mature_612_residues
MRMMFGRRLAAPASGQGTAELGDLPEWNLADLYAGMEAPELKRDIAKAAADAIAFETRWKGTLAAEAGRGGAGKLGEALV
AYEALEELIGRIVSYAGLVYAGNTADPQRAKLYGDIQEKMTDASAHLLFFALELNLIDDAAIESALTSDSAFGHYRPWVL
DLRMDKPYQLEDRVEQLFHEKSITGRGAWNRLFDETMTDLRFDVEGEELTLEPALNRLQDAYGEVRRRASEALAATFRKN
LRTFTLITNTLAKDKEISDRWRGFEDIADSRHLANRVERGVVDALATAVREAYPRLSHRYYAMKARWLGMDVMNHWDRNA
PLPETPQAVIGWDEARNTVLSAYQRFSPEMAEIARTFFDRNWIDAPVRPGKSPGAFAHPTVPSAHPYVLLNYMGKPRDVM
TLAHELGHGVHQVLAAGQGALMASTPLTLAETASVFGEMLTFRSLLEQTTDRRERKAMLAQKVEDMINTVVRQIAFYEFE
RKVHAERRNGELTSDRLGQFWLEVQAESLGPAIKLREGYEVFWTYIPHFIHSPFYVYAYAFGDCLVNSLYAVYQNAERGF
QDKYFEMLRAGGTKHHSQLLAPFGLDATDPAFWQIGLGVISGLIDELETLDR

Specific function: Unknown

COG id: COG1164

COG function: function code E; Oligoendopeptidase F

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M3B family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001567
- InterPro:   IPR004438
- InterPro:   IPR013647 [H]

Pfam domain/function: PF01432 Peptidase_M3; PF08439 Peptidase_M3_N [H]

EC number: NA

Molecular weight: Translated: 68902; Mature: 68902

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMMFGRRLAAPASGQGTAELGDLPEWNLADLYAGMEAPELKRDIAKAAADAIAFETRWK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
GTLAAEAGRGGAGKLGEALVAYEALEELIGRIVSYAGLVYAGNTADPQRAKLYGDIQEKM
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH
TDASAHLLFFALELNLIDDAAIESALTSDSAFGHYRPWVLDLRMDKPYQLEDRVEQLFHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
KSITGRGAWNRLFDETMTDLRFDVEGEELTLEPALNRLQDAYGEVRRRASEALAATFRKN
HCCCCCCHHHHHHHHHHHHCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LRTFTLITNTLAKDKEISDRWRGFEDIADSRHLANRVERGVVDALATAVREAYPRLSHRY
CHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAMKARWLGMDVMNHWDRNAPLPETPQAVIGWDEARNTVLSAYQRFSPEMAEIARTFFDR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
NWIDAPVRPGKSPGAFAHPTVPSAHPYVLLNYMGKPRDVMTLAHELGHGVHQVLAAGQGA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
LMASTPLTLAETASVFGEMLTFRSLLEQTTDRRERKAMLAQKVEDMINTVVRQIAFYEFE
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKVHAERRNGELTSDRLGQFWLEVQAESLGPAIKLREGYEVFWTYIPHFIHSPFYVYAYA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHH
FGDCLVNSLYAVYQNAERGFQDKYFEMLRAGGTKHHSQLLAPFGLDATDPAFWQIGLGVI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH
SGLIDELETLDR
HHHHHHHHHHCC
>Mature Secondary Structure
MRMMFGRRLAAPASGQGTAELGDLPEWNLADLYAGMEAPELKRDIAKAAADAIAFETRWK
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCC
GTLAAEAGRGGAGKLGEALVAYEALEELIGRIVSYAGLVYAGNTADPQRAKLYGDIQEKM
CCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHH
TDASAHLLFFALELNLIDDAAIESALTSDSAFGHYRPWVLDLRMDKPYQLEDRVEQLFHE
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHH
KSITGRGAWNRLFDETMTDLRFDVEGEELTLEPALNRLQDAYGEVRRRASEALAATFRKN
HCCCCCCHHHHHHHHHHHHCEEECCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LRTFTLITNTLAKDKEISDRWRGFEDIADSRHLANRVERGVVDALATAVREAYPRLSHRY
CHHHHHHHHHHHCCCHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YAMKARWLGMDVMNHWDRNAPLPETPQAVIGWDEARNTVLSAYQRFSPEMAEIARTFFDR
HHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHCC
NWIDAPVRPGKSPGAFAHPTVPSAHPYVLLNYMGKPRDVMTLAHELGHGVHQVLAAGQGA
CCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCC
LMASTPLTLAETASVFGEMLTFRSLLEQTTDRRERKAMLAQKVEDMINTVVRQIAFYEFE
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RKVHAERRNGELTSDRLGQFWLEVQAESLGPAIKLREGYEVFWTYIPHFIHSPFYVYAYA
HHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCCHHHHHHH
FGDCLVNSLYAVYQNAERGFQDKYFEMLRAGGTKHHSQLLAPFGLDATDPAFWQIGLGVI
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH
SGLIDELETLDR
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]