Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

Click here to switch to the map view.

The map label for this gene is 13472616

Identifier: 13472616

GI number: 13472616

Start: 2386287

End: 2386916

Strand: Direct

Name: 13472616

Synonym: mlr2964

Alternate gene names: NA

Gene position: 2386287-2386916 (Clockwise)

Preceding gene: 13472614

Following gene: 13472617

Centisome position: 33.92

GC content: 62.38

Gene sequence:

>630_bases
ATGGTCTGGCTAAGGAAAACCGGTAAAAGGCGGACTTTCTTGGCGATTTCTCCACCCAGCGACATCGTTATGGATGTTGC
CCGTGCTGCCGATCCGATGGATATCGAGGCTGCCCGTGCCGCGCTGACCAAGCGCGCGGGTGCCGCCGCCGGTGCCTTTT
CGGTCGACACCGCCGGTTCGCTAGATACCGCGGCGTCCGTCGATCCCGGCTCGATTCTGTCGCGCGCCACCGCTGACAAG
GCGGCGGCGACAGCCGATCCGGCCAAGAAATTCAAGAAGTTCGAGGCGATGGTCCTGCAGACCTTCATCCAGAACATGCT
GCCCAAGGACACGGAGGGCGTCTACGGCACGGGTCTGGCCGGCGACATGTGGAAGTCGCAGCTCGCCGAGCGCGTCGCCG
ACGTCATGGCCGAGCGCGGCGGCATCGGCATCGCCAAGTCGCTGGTTGCCGACCACTATATGGACGGCAAGCGCAAGGTG
CCGATCGGCCCGGTTTCAAACGGACCGGAAAAAACCGAGATCGATCAGCAGACCCGTCTGTCCACCTCGCTCGTCCAGGA
ATTGCAGCGCAAGGCCGCCAGGTCGATGACCGGCGACGAGACAACCATAAAAACAGACATCAAGATCTAG

Upstream 100 bases:

>100_bases
ACCGACGCTGGCAAGGTCGGCGAGAGCCCGAAGCAGCCGCTCAATCCCCACATTCCGCCCTCCTCCCCCTCGCGCAAGCC
TGCCACAAGCTTGTTGAGGC

Downstream 100 bases:

>100_bases
ACTGGGAAACACCATGGCCGATTCTTCCGAATTCACTGCCAACCTGCCGGCGCGCACGGCCGCGTCGGAGGCTCCGATCC
CGTTCGCGCGGCCCGGAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 209; Mature: 209

Protein sequence:

>209_residues
MVWLRKTGKRRTFLAISPPSDIVMDVARAADPMDIEAARAALTKRAGAAAGAFSVDTAGSLDTAASVDPGSILSRATADK
AAATADPAKKFKKFEAMVLQTFIQNMLPKDTEGVYGTGLAGDMWKSQLAERVADVMAERGGIGIAKSLVADHYMDGKRKV
PIGPVSNGPEKTEIDQQTRLSTSLVQELQRKAARSMTGDETTIKTDIKI

Sequences:

>Translated_209_residues
MVWLRKTGKRRTFLAISPPSDIVMDVARAADPMDIEAARAALTKRAGAAAGAFSVDTAGSLDTAASVDPGSILSRATADK
AAATADPAKKFKKFEAMVLQTFIQNMLPKDTEGVYGTGLAGDMWKSQLAERVADVMAERGGIGIAKSLVADHYMDGKRKV
PIGPVSNGPEKTEIDQQTRLSTSLVQELQRKAARSMTGDETTIKTDIKI
>Mature_209_residues
MVWLRKTGKRRTFLAISPPSDIVMDVARAADPMDIEAARAALTKRAGAAAGAFSVDTAGSLDTAASVDPGSILSRATADK
AAATADPAKKFKKFEAMVLQTFIQNMLPKDTEGVYGTGLAGDMWKSQLAERVADVMAERGGIGIAKSLVADHYMDGKRKV
PIGPVSNGPEKTEIDQQTRLSTSLVQELQRKAARSMTGDETTIKTDIKI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22254; Mature: 22254

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVWLRKTGKRRTFLAISPPSDIVMDVARAADPMDIEAARAALTKRAGAAAGAFSVDTAGS
CCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
LDTAASVDPGSILSRATADKAAATADPAKKFKKFEAMVLQTFIQNMLPKDTEGVYGTGLA
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GDMWKSQLAERVADVMAERGGIGIAKSLVADHYMDGKRKVPIGPVSNGPEKTEIDQQTRL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
STSLVQELQRKAARSMTGDETTIKTDIKI
HHHHHHHHHHHHHHCCCCCCCEEEEECCC
>Mature Secondary Structure
MVWLRKTGKRRTFLAISPPSDIVMDVARAADPMDIEAARAALTKRAGAAAGAFSVDTAGS
CCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC
LDTAASVDPGSILSRATADKAAATADPAKKFKKFEAMVLQTFIQNMLPKDTEGVYGTGLA
CCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
GDMWKSQLAERVADVMAERGGIGIAKSLVADHYMDGKRKVPIGPVSNGPEKTEIDQQTRL
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHH
STSLVQELQRKAARSMTGDETTIKTDIKI
HHHHHHHHHHHHHHCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA