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The map label for this gene is flgH

Identifier: 13472580

GI number: 13472580

Start: 2349682

End: 2350389

Strand: Direct

Name: flgH

Synonym: mlr2921

Alternate gene names: 13472580

Gene position: 2349682-2350389 (Clockwise)

Preceding gene: 13472579

Following gene: 13472581

Centisome position: 33.39

GC content: 63.56

Gene sequence:

>708_bases
ATGATCCGCAGAACGCTCATCCTATGTGCGGTCGCTGCGCTATCCGGCTGCGGCACCAACCTCAGGGAAGTTGGCAAGGA
GCCGTCGCTGTCGCCGGTCGGCTCAGGCATTGACGGCGGCAACACGTCTGCCCTTTACAAATACCCCGAGCCACCTCGGG
CGCCGGTGAAGAAGTTCTCGCTGTGGGACGATCGCCAGAGCCGCCTCTTCACCGATCCCCGGGCGCTCTCGCAGGGTGAC
ATCCTGACCGTCCGGATCAAGATCAACGACCGCGCCAATTTCAAGAACCAGAACGACAGGAGCCGCACCGCCAACCGCAA
GCTCGGCTTCGACCTCAGCGCGCAGTGGGACAAGTGGAGCACCGCCGGCAAGGGTGCCGGCGCGCTCAACTCCGCCACGG
ACACGACGGCCGATGGTGAGATCAAACGGTCGGAAACGCTTGAACTCAATGTCGCGGCGATCGTCACCGACGTCTTGCCG
AACGGCAATCTGATGATCACGGGGTCGCAAGAAGTGCGCGTCAACGCCGAGTTGAGGGTGCTGACCATCGCCGGCATCGT
GCGGCCGGCCGATATCGGCGCCGAGAACACGATCCCCTACGAACGCATAGCCGAAGCGCGCATTTCTTACGGCGGGCGCG
GCCGCATCAGCGAGATCCAGCAGCCGGCCTACGGCCAGCAGGTTCTCGATCAGGTTCTTCCGTTCTAG

Upstream 100 bases:

>100_bases
ATTCACGCAAGGCCGGCGTCATTCTCAACGAAATGGACCAGAAGGCGGCGGCGACGCTCACCGGCATCATGGCCAGCGCA
GCCCGAAGGGTAGATCCGTC

Downstream 100 bases:

>100_bases
GGATTGGAGAACAAAGCGCCGTGGCCAATGTCGAACAACTCCAGCCTCGCAAGGGTCCATCGCTTGTGGTTCAAGGCGCC
ATGCTGCTGGTGGTGACGGC

Product: flagellar basal body L-ring protein

Products: NA

Alternate protein names: Basal body L-ring protein

Number of amino acids: Translated: 235; Mature: 235

Protein sequence:

>235_residues
MIRRTLILCAVAALSGCGTNLREVGKEPSLSPVGSGIDGGNTSALYKYPEPPRAPVKKFSLWDDRQSRLFTDPRALSQGD
ILTVRIKINDRANFKNQNDRSRTANRKLGFDLSAQWDKWSTAGKGAGALNSATDTTADGEIKRSETLELNVAAIVTDVLP
NGNLMITGSQEVRVNAELRVLTIAGIVRPADIGAENTIPYERIAEARISYGGRGRISEIQQPAYGQQVLDQVLPF

Sequences:

>Translated_235_residues
MIRRTLILCAVAALSGCGTNLREVGKEPSLSPVGSGIDGGNTSALYKYPEPPRAPVKKFSLWDDRQSRLFTDPRALSQGD
ILTVRIKINDRANFKNQNDRSRTANRKLGFDLSAQWDKWSTAGKGAGALNSATDTTADGEIKRSETLELNVAAIVTDVLP
NGNLMITGSQEVRVNAELRVLTIAGIVRPADIGAENTIPYERIAEARISYGGRGRISEIQQPAYGQQVLDQVLPF
>Mature_235_residues
MIRRTLILCAVAALSGCGTNLREVGKEPSLSPVGSGIDGGNTSALYKYPEPPRAPVKKFSLWDDRQSRLFTDPRALSQGD
ILTVRIKINDRANFKNQNDRSRTANRKLGFDLSAQWDKWSTAGKGAGALNSATDTTADGEIKRSETLELNVAAIVTDVLP
NGNLMITGSQEVRVNAELRVLTIAGIVRPADIGAENTIPYERIAEARISYGGRGRISEIQQPAYGQQVLDQVLPF

Specific function: Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation

COG id: COG2063

COG function: function code N; Flagellar basal body L-ring protein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor (Probable). Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flgH family

Homologues:

Organism=Escherichia coli, GI1787319, Length=193, Percent_Identity=28.4974093264249, Blast_Score=73, Evalue=2e-14,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGH_RHILO (Q98HD3)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_104147.1
- GeneID:   1226808
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr2921
- NMPDR:   fig|266835.1.peg.2251
- HOGENOM:   HBG507455
- OMA:   SMASANE
- ProtClustDB:   PRK00249
- HAMAP:   MF_00415
- InterPro:   IPR000527
- PRINTS:   PR01008

Pfam domain/function: PF02107 FlgH

EC number: NA

Molecular weight: Translated: 25524; Mature: 25524

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRRTLILCAVAALSGCGTNLREVGKEPSLSPVGSGIDGGNTSALYKYPEPPRAPVKKFS
CCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHCC
LWDDRQSRLFTDPRALSQGDILTVRIKINDRANFKNQNDRSRTANRKLGFDLSAQWDKWS
CCCCCCHHEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
TAGKGAGALNSATDTTADGEIKRSETLELNVAAIVTDVLPNGNLMITGSQEVRVNAELRV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHEEEHHCCCCCEEEECCCEEEECCEEEE
LTIAGIVRPADIGAENTIPYERIAEARISYGGRGRISEIQQPAYGQQVLDQVLPF
EEEECEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIRRTLILCAVAALSGCGTNLREVGKEPSLSPVGSGIDGGNTSALYKYPEPPRAPVKKFS
CCHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHCC
LWDDRQSRLFTDPRALSQGDILTVRIKINDRANFKNQNDRSRTANRKLGFDLSAQWDKWS
CCCCCCHHEECCCCCCCCCCEEEEEEEECCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC
TAGKGAGALNSATDTTADGEIKRSETLELNVAAIVTDVLPNGNLMITGSQEVRVNAELRV
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHEEEHHCCCCCEEEECCCEEEECCEEEE
LTIAGIVRPADIGAENTIPYERIAEARISYGGRGRISEIQQPAYGQQVLDQVLPF
EEEECEECCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11214968