| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is flgA [H]
Identifier: 13472577
GI number: 13472577
Start: 2347332
End: 2347856
Strand: Direct
Name: flgA [H]
Synonym: mlr2917
Alternate gene names: 13472577
Gene position: 2347332-2347856 (Clockwise)
Preceding gene: 13472576
Following gene: 13472578
Centisome position: 33.36
GC content: 65.71
Gene sequence:
>525_bases ATGGCCATGCCGATCTCCTGCTCCGCATTCCACCGCACCGCGCTGATCCTCGCGCTGGTGACCGGCGGCGTGCCGGCTTT CGCCCAGGAGTCGGCCAATCCGTCGGCAACGCAGATCGCCAGCAACCAGCCTGCCGGCGAGGTCGTGCTGATCCCCAACC GCGTCATCTATCCCGGCGAGACCATCGAGCTTGCCGCCTTGAAACAGGTGACGCTCATCGCCGGCAAGCACAAGCCCGAT GCGATGGCGACCCACGCCGAAGAGCTCCAGGGCAAGATCGCCAAGCGCACTCTGCTGCCCGGTCGCTACATCCCGACCGC CGCCATCCGTGAGGCCTGGCTGGTCGAACAGGGTGCCGCGGTGCAGGTTTTCTTCATCGCCGGCGGACTGACGATAACAG CCACCGCGGTGACCTTGCAGCCAGGTTCGGCCGGCGACCTCATCAAGGTTCGCAACAGCGACAGCGGCAAGATCCTCTCC GGCACGGTGATGGCCGACGGAACCATCCAGGTCAGCGCTTCATGA
Upstream 100 bases:
>100_bases GCTGATCTCGGCGCAGCGCGCCTATGAGATGAATTCCAAGGTGATCCAGGCCGCCGACGACATGGCCTCGGTCGTCTCCA AGAACATCAGGTAAGGGACG
Downstream 100 bases:
>100_bases TGCGCCTGCTTGCCCTTCTGCTCGCGGCCACGCTCGGCCTGCAGCCGGCCCTGGCCGACGGCTTGACACCCAAGGCCAAG CGCGACCTCGCCGCCAAGAA
Product: flagellar basal body P-ring biosynthesis protein FlgA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 173
Protein sequence:
>174_residues MAMPISCSAFHRTALILALVTGGVPAFAQESANPSATQIASNQPAGEVVLIPNRVIYPGETIELAALKQVTLIAGKHKPD AMATHAEELQGKIAKRTLLPGRYIPTAAIREAWLVEQGAAVQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILS GTVMADGTIQVSAS
Sequences:
>Translated_174_residues MAMPISCSAFHRTALILALVTGGVPAFAQESANPSATQIASNQPAGEVVLIPNRVIYPGETIELAALKQVTLIAGKHKPD AMATHAEELQGKIAKRTLLPGRYIPTAAIREAWLVEQGAAVQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILS GTVMADGTIQVSAS >Mature_173_residues AMPISCSAFHRTALILALVTGGVPAFAQESANPSATQIASNQPAGEVVLIPNRVIYPGETIELAALKQVTLIAGKHKPDA MATHAEELQGKIAKRTLLPGRYIPTAAIREAWLVEQGAAVQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILSG TVMADGTIQVSAS
Specific function: Unknown
COG id: COG1261
COG function: function code NO; Flagellar basal body P-ring biosynthesis protein
Gene ontology:
Cell location: Periplasm (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the flgA family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017585 - InterPro: IPR013974 [H]
Pfam domain/function: PF08666 SAF [H]
EC number: NA
Molecular weight: Translated: 17970; Mature: 17839
Theoretical pI: Translated: 8.50; Mature: 8.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAMPISCSAFHRTALILALVTGGVPAFAQESANPSATQIASNQPAGEVVLIPNRVIYPGE CCCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHEECCCCCCCCEEECCCEEECCCC TIELAALKQVTLIAGKHKPDAMATHAEELQGKIAKRTLLPGRYIPTAAIREAWLVEQGAA CEEEHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCE VQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGTIQVSAS EEEEEEECCEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCEEEEEEC >Mature Secondary Structure AMPISCSAFHRTALILALVTGGVPAFAQESANPSATQIASNQPAGEVVLIPNRVIYPGE CCCCCHHHHHHHHHHHHHHHCCCCCHHHCCCCCCHHEECCCCCCCCEEECCCEEECCCC TIELAALKQVTLIAGKHKPDAMATHAEELQGKIAKRTLLPGRYIPTAAIREAWLVEQGAA CEEEHHHEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCCE VQVFFIAGGLTITATAVTLQPGSAGDLIKVRNSDSGKILSGTVMADGTIQVSAS EEEEEEECCEEEEEEEEEECCCCCCCEEEEECCCCCCEEEEEEEECCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11481430 [H]