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The map label for this gene is flgF

Identifier: 13472570

GI number: 13472570

Start: 2342400

End: 2343125

Strand: Direct

Name: flgF

Synonym: mlr2907

Alternate gene names: 13472570

Gene position: 2342400-2343125 (Clockwise)

Preceding gene: 13472569

Following gene: 13472571

Centisome position: 33.29

GC content: 64.74

Gene sequence:

>726_bases
ATGCAGGACAGTCTCTACGTCGCCCTATCCGCACAGATGGCACTCGAGCGCCGGCTCGACACGATCGCCGACAATGTCGC
CAACGCCAACACCGTCGGCTTTCGCGCCACCGGCGTGAAATTCGAGGATATGGTGTCGGGCACCGGACAGAAATCGGTGT
CCTTCGCCTCGTCGGGCAAGACCTATCTGTCGGGCGCCCACGGGTCCCTGAGCGAGACCGGCAATCCGTTCGATTTCGCC
ATCCAGGGCGACGCCTGGTTCGCCATAGACACACCGGCCGGCACCGTCATGACCCGCGACGGCCGCTTCTCGATGAACGA
AAATGGCGAGCTGATGTCGATCGAAGGCCATCCGGTGCTCGACGCCGGCGGCGCGCCGATCCAGCTCGACCCCCGCAACG
GCCCGCCCAAGGCCGGCGCCGACGGCTCGCTGCGCCAGAACGACCAGCTCGTCGGCTCGATCGGCCTTTACAATTTCGAT
CCGGGCGAGAATTTCGTGCGTTACGGCAATTCCGGCATCGTGCCGGCGCGCACCCCCGAGCCGGTCACCGACCGCTCCGA
TGTCGGTATCGCCCAAGGTTTCGTCGAAGAATCCAACGTCAATCCGGTGCTGGAGATGACCCGGCTGATCATGGTCCAGC
GCGCCTTCGAGAACACCGCCGCACTGATGCGGCAGACGGCGTCCTCTTCCGACGAGGCGATCAAGACGCTCGGCTCGAAG
TCGTAG

Upstream 100 bases:

>100_bases
CGACGGCTGTGACGTCAGTCAGCGTGCTCTTTGCCCAGCCGGTCACCGCGGGCATATCAACCGATCTGATGATGGCCATG
CAGAAGTTGAAATTCTGATC

Downstream 100 bases:

>100_bases
CATGTCGCTCGACCGGTCCTCCATCCGTGCACCCGAAAGGCAGCTGCAGCCGGCGCCCGATGATCGGCTCGCCGCACTGG
AACGGGTTATCAGGCGTTTC

Product: flagellar basal body rod protein FlgF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MQDSLYVALSAQMALERRLDTIADNVANANTVGFRATGVKFEDMVSGTGQKSVSFASSGKTYLSGAHGSLSETGNPFDFA
IQGDAWFAIDTPAGTVMTRDGRFSMNENGELMSIEGHPVLDAGGAPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFD
PGENFVRYGNSGIVPARTPEPVTDRSDVGIAQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTASSSDEAIKTLGSK
S

Sequences:

>Translated_241_residues
MQDSLYVALSAQMALERRLDTIADNVANANTVGFRATGVKFEDMVSGTGQKSVSFASSGKTYLSGAHGSLSETGNPFDFA
IQGDAWFAIDTPAGTVMTRDGRFSMNENGELMSIEGHPVLDAGGAPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFD
PGENFVRYGNSGIVPARTPEPVTDRSDVGIAQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTASSSDEAIKTLGSK
S
>Mature_241_residues
MQDSLYVALSAQMALERRLDTIADNVANANTVGFRATGVKFEDMVSGTGQKSVSFASSGKTYLSGAHGSLSETGNPFDFA
IQGDAWFAIDTPAGTVMTRDGRFSMNENGELMSIEGHPVLDAGGAPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFD
PGENFVRYGNSGIVPARTPEPVTDRSDVGIAQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTASSSDEAIKTLGSK
S

Specific function: Unknown

COG id: COG4786

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family

Homologues:

Organism=Escherichia coli, GI1787318, Length=268, Percent_Identity=30.2238805970149, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1787317, Length=234, Percent_Identity=28.6324786324786, Blast_Score=66, Evalue=2e-12,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): FLGF_RHILO (Q98HE3)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_104137.1
- ProteinModelPortal:   Q98HE3
- SMR:   Q98HE3
- GeneID:   1226798
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mlr2907
- NMPDR:   fig|266835.1.peg.2241
- HOGENOM:   HBG579156
- OMA:   FRATEVK
- ProtClustDB:   PRK12642
- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR020013
- InterPro:   IPR012836
- TIGRFAMs:   TIGR03506
- TIGRFAMs:   TIGR02490

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod

EC number: NA

Molecular weight: Translated: 25544; Mature: 25544

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQDSLYVALSAQMALERRLDTIADNVANANTVGFRATGVKFEDMVSGTGQKSVSFASSGK
CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCCCEEECCCCC
TYLSGAHGSLSETGNPFDFAIQGDAWFAIDTPAGTVMTRDGRFSMNENGELMSIEGHPVL
EEEECCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCEEEECCCEEE
DAGGAPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFDPGENFVRYGNSGIVPARTPE
ECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHEECCCCCCCCCCCC
PVTDRSDVGIAQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTASSSDEAIKTLGSK
CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
S
C
>Mature Secondary Structure
MQDSLYVALSAQMALERRLDTIADNVANANTVGFRATGVKFEDMVSGTGQKSVSFASSGK
CCCCEEEEEHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCHHHHHCCCCCCCEEECCCCC
TYLSGAHGSLSETGNPFDFAIQGDAWFAIDTPAGTVMTRDGRFSMNENGELMSIEGHPVL
EEEECCCCCCCCCCCCEEEEEECCEEEEEECCCCEEEEECCCCCCCCCCCEEEECCCEEE
DAGGAPIQLDPRNGPPKAGADGSLRQNDQLVGSIGLYNFDPGENFVRYGNSGIVPARTPE
ECCCCEEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCHHHEECCCCCCCCCCCC
PVTDRSDVGIAQGFVEESNVNPVLEMTRLIMVQRAFENTAALMRQTASSSDEAIKTLGSK
CCCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCC
S
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968