| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472546
Identifier: 13472546
GI number: 13472546
Start: 2312174
End: 2314585
Strand: Reverse
Name: 13472546
Synonym: mll2876
Alternate gene names: NA
Gene position: 2314585-2312174 (Counterclockwise)
Preceding gene: 13472547
Following gene: 13472545
Centisome position: 32.9
GC content: 66.5
Gene sequence:
>2412_bases ATGGCAAAGGGGAATCACAAGAGGATACGCGGCAAGCCGCAGATCCATAGCCTGCTGGAGCACTACCAGCCGATCGACGG CGTCGTCGACGAGATGGTCGACGCCGCAGGCAATCCCCGTCCGGTCTGGAAGCATTTCATCGAGGCGCTCGACGATCTCG GTGCCGAGAAGCTCGGCCAGCGTTTTGCTCGCGCCGACCAGTATCTGCGCGACGCCGGCGTCTATTACCGCGTCTATGAC AAGGCCGGCGCCAATGAGCGCGAATGGCCGCTGGCGCATGTGCCGCTGCTCATCGAAGACAACGAATGGGCCGCGATCAG CGCCGGGCTCGTTCAGCGCGCCGAGCTGTTCGAGGAAACCATCGCCGATATTTATGGGCCAAACCGCCTGATCGAAAAAG GCATCCTGCCGGCTGGATTGATCGCCGCCAGCCCCGAATATTTGCGCCCTGTCGTGGGCACCACGCCGGCCGGCGGCCAT TACCTGCATTTCTGTGCCTTCGAGCTCGGCCGTGGGCCTGACGGCCAGTGGTGGGTGCTGGGCGACCGTACGCAAGCGCC GTCGGGCGCCGGCTTCGCCCTGGAGAACCGCGTCGCCACGACGCGCGCGCTGTCCGATATCTATGGCGAGATGCATGTGC ATCGGCTCGCCGGCTTCTTTCGCCGTTTCCGCGATGCGCTGATCGGCATGGCCAGGGAAAGCGACGGCCGCGTCGCCATT TTGACGCCGGGGCCGCTCAACGAAACCTACTATGAACACGCCTATATCGCCCGCTATCTGGGCATCATGCTGCTCGAAGG GGAGGACCTGACCGTTTCCGGCGGCAGGCTGATGGTGCGCACCGTTTCCGGCCTCATGCCGATCAGCGTGTTGTGGCGAC GTCTCGACGCGGCCTTCGCCGATCCGCTCGAGTTGCGCTCGGATTCGCAGATCGGCACGCCGGGGCTGGTCGAGGCGATC CGCCAGGGCGCGGTTGCCACCGTCAATGCGCTGGGATCAGGGCTGATGGAAACACGGGCGCTGCTCGCCTTCCTGCCCAA GATCGCACGCGAATTGCGTGGCGAGGAGCTGCTCTTGCCGAGCGTCGCGACATGGTGGTGCGGGCAGGCGAGCGAACGCG CCCATGTGCTTGCCAATATCGATCGCATGGTGGTCGGCCCGGCGCTGTCGACGAGACTTGCCTTCGAGGATGATGGCCAG ACCACGCTCGGCTCGACGCTGTCGGCCGGGGAGCGGGCCGAGCTGGTGGCGCGCATCGAACGCGATGGCGGCGCCTTCGT CGGTCAGGAAGCGGTGACGCTGTCGACCACACCGGTCTTTGTCGGCGGCTGGTTGGAGCCGCGGCCGGCGAGCCTGCGCG TCTATCTGGCGCGCACGCCCGAGGGCTGGACGGTGATGCCGGGCGGGTTTGCCCGCGTCGGCCTGTCGCTCGACCCGACG GCGATCGCCATGCAGCGCGGCGGCCAGGCGGCTGACGTCTGGGTGGTCAGCGACAGGCCCGTCGAGCGCGAGACGCTGCT GCCGCAAGAGGGCGACAGCTTCACCCGCACCAGACCGGGCAGCCTGCCCAGCCGCGCTGCGGAGAACCTCACCTGGCTCG GCCGCTATATCGAGCGTTCGGAAGACACGGTGCGCATCCTGCGCGCCTATCATGTGCGGCTGGCCGAAACCTCCGACCCG GACATGCCGTTGCTGGCCGACATCAGGGACTATCTCGAGCCGTTCGGCATCGACGTCGAGACGGCGATCCCGTTGGGGCT GATCGGCACGCTCGACAGTGCCGTCTACAGCGCCGGACAGATCCGCGACCGCTTCTCGCCCGACGGCTGGCTGGCGCTGA AGGACCTGTCGAAGACCATCCATCAGTTCGCCAAGACGGTGGCGCCGGGCGACGACGCGACACGGGCAATGACCGTCATC CTGCGCAAGCTCGCCGGCTTTTCCGGCCTGCTGCACGAGAACATGTACCGCTTCGCCGGCTGGCGTTTCCTCGAGATCGG CCGGCGGCTGGAGCGCGGCATCCAGATCGCCCGCACGCTGTCCCGGCTGACCGACCCCAAGGCGCCGGATGGCGCGCTCG ACATGATGCTGGAGATCGGCGACAGCGTCATGACCCATCGCCGGCAGTATCCGGTGCAGGCCGGCCGGCGCACGGTGATC GATCTTCTGGCGCTCGATCCGCTCAATCCGCGCTCGATCCTGTTCCAGCTGGAAAGGCTGAAGGCCGAGATCGGCCTGTT GCCGTCGGTCGGCGGCGAGGGGCACATGTCGCCGGCGGCGAAGGAGATCCTGCAGCTCAACACGGCCATAGCCATCAAGG AGCCTTCGGACATGACGGCAAAGGCGCTGGACGAACTCGCCTATGAAATCGGCGGTCTCTACAACAGTCTCGCCAAAGCC TATTTCGGCTAG
Upstream 100 bases:
>100_bases CGGCCATACACCATCGGCCTATGTGCTGCGCGAGGAACAACCGGCGGAAGATTTCCCGATGACCCTTGACCTCAGGCGGC CGGCAAGACTCTGATCAGCG
Downstream 100 bases:
>100_bases TCCATGCTTTACGACATCAGGCTTCATCTCCATTACGATTATGCAGCGGCGGCGGGCGGCGGCCGCCACCAGATCCGCGT GCTGCCATCGACGATATCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 803; Mature: 802
Protein sequence:
>803_residues MAKGNHKRIRGKPQIHSLLEHYQPIDGVVDEMVDAAGNPRPVWKHFIEALDDLGAEKLGQRFARADQYLRDAGVYYRVYD KAGANEREWPLAHVPLLIEDNEWAAISAGLVQRAELFEETIADIYGPNRLIEKGILPAGLIAASPEYLRPVVGTTPAGGH YLHFCAFELGRGPDGQWWVLGDRTQAPSGAGFALENRVATTRALSDIYGEMHVHRLAGFFRRFRDALIGMARESDGRVAI LTPGPLNETYYEHAYIARYLGIMLLEGEDLTVSGGRLMVRTVSGLMPISVLWRRLDAAFADPLELRSDSQIGTPGLVEAI RQGAVATVNALGSGLMETRALLAFLPKIARELRGEELLLPSVATWWCGQASERAHVLANIDRMVVGPALSTRLAFEDDGQ TTLGSTLSAGERAELVARIERDGGAFVGQEAVTLSTTPVFVGGWLEPRPASLRVYLARTPEGWTVMPGGFARVGLSLDPT AIAMQRGGQAADVWVVSDRPVERETLLPQEGDSFTRTRPGSLPSRAAENLTWLGRYIERSEDTVRILRAYHVRLAETSDP DMPLLADIRDYLEPFGIDVETAIPLGLIGTLDSAVYSAGQIRDRFSPDGWLALKDLSKTIHQFAKTVAPGDDATRAMTVI LRKLAGFSGLLHENMYRFAGWRFLEIGRRLERGIQIARTLSRLTDPKAPDGALDMMLEIGDSVMTHRRQYPVQAGRRTVI DLLALDPLNPRSILFQLERLKAEIGLLPSVGGEGHMSPAAKEILQLNTAIAIKEPSDMTAKALDELAYEIGGLYNSLAKA YFG
Sequences:
>Translated_803_residues MAKGNHKRIRGKPQIHSLLEHYQPIDGVVDEMVDAAGNPRPVWKHFIEALDDLGAEKLGQRFARADQYLRDAGVYYRVYD KAGANEREWPLAHVPLLIEDNEWAAISAGLVQRAELFEETIADIYGPNRLIEKGILPAGLIAASPEYLRPVVGTTPAGGH YLHFCAFELGRGPDGQWWVLGDRTQAPSGAGFALENRVATTRALSDIYGEMHVHRLAGFFRRFRDALIGMARESDGRVAI LTPGPLNETYYEHAYIARYLGIMLLEGEDLTVSGGRLMVRTVSGLMPISVLWRRLDAAFADPLELRSDSQIGTPGLVEAI RQGAVATVNALGSGLMETRALLAFLPKIARELRGEELLLPSVATWWCGQASERAHVLANIDRMVVGPALSTRLAFEDDGQ TTLGSTLSAGERAELVARIERDGGAFVGQEAVTLSTTPVFVGGWLEPRPASLRVYLARTPEGWTVMPGGFARVGLSLDPT AIAMQRGGQAADVWVVSDRPVERETLLPQEGDSFTRTRPGSLPSRAAENLTWLGRYIERSEDTVRILRAYHVRLAETSDP DMPLLADIRDYLEPFGIDVETAIPLGLIGTLDSAVYSAGQIRDRFSPDGWLALKDLSKTIHQFAKTVAPGDDATRAMTVI LRKLAGFSGLLHENMYRFAGWRFLEIGRRLERGIQIARTLSRLTDPKAPDGALDMMLEIGDSVMTHRRQYPVQAGRRTVI DLLALDPLNPRSILFQLERLKAEIGLLPSVGGEGHMSPAAKEILQLNTAIAIKEPSDMTAKALDELAYEIGGLYNSLAKA YFG >Mature_802_residues AKGNHKRIRGKPQIHSLLEHYQPIDGVVDEMVDAAGNPRPVWKHFIEALDDLGAEKLGQRFARADQYLRDAGVYYRVYDK AGANEREWPLAHVPLLIEDNEWAAISAGLVQRAELFEETIADIYGPNRLIEKGILPAGLIAASPEYLRPVVGTTPAGGHY LHFCAFELGRGPDGQWWVLGDRTQAPSGAGFALENRVATTRALSDIYGEMHVHRLAGFFRRFRDALIGMARESDGRVAIL TPGPLNETYYEHAYIARYLGIMLLEGEDLTVSGGRLMVRTVSGLMPISVLWRRLDAAFADPLELRSDSQIGTPGLVEAIR QGAVATVNALGSGLMETRALLAFLPKIARELRGEELLLPSVATWWCGQASERAHVLANIDRMVVGPALSTRLAFEDDGQT TLGSTLSAGERAELVARIERDGGAFVGQEAVTLSTTPVFVGGWLEPRPASLRVYLARTPEGWTVMPGGFARVGLSLDPTA IAMQRGGQAADVWVVSDRPVERETLLPQEGDSFTRTRPGSLPSRAAENLTWLGRYIERSEDTVRILRAYHVRLAETSDPD MPLLADIRDYLEPFGIDVETAIPLGLIGTLDSAVYSAGQIRDRFSPDGWLALKDLSKTIHQFAKTVAPGDDATRAMTVIL RKLAGFSGLLHENMYRFAGWRFLEIGRRLERGIQIARTLSRLTDPKAPDGALDMMLEIGDSVMTHRRQYPVQAGRRTVID LLALDPLNPRSILFQLERLKAEIGLLPSVGGEGHMSPAAKEILQLNTAIAIKEPSDMTAKALDELAYEIGGLYNSLAKAY FG
Specific function: Unknown
COG id: COG2308
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007296 - InterPro: IPR007297 - InterPro: IPR007302 [H]
Pfam domain/function: PF04168 DUF403; PF04169 DUF404; PF04174 DUF407 [H]
EC number: NA
Molecular weight: Translated: 88189; Mature: 88058
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKGNHKRIRGKPQIHSLLEHYQPIDGVVDEMVDAAGNPRPVWKHFIEALDDLGAEKLGQ CCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH RFARADQYLRDAGVYYRVYDKAGANEREWPLAHVPLLIEDNEWAAISAGLVQRAELFEET HHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCEEEECCCCEEHHHHHHHHHHHHHHH IADIYGPNRLIEKGILPAGLIAASPEYLRPVVGTTPAGGHYLHFCAFELGRGPDGQWWVL HHHHCCCHHHHHHCCCCCHHHHCCHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCEEEE GDRTQAPSGAGFALENRVATTRALSDIYGEMHVHRLAGFFRRFRDALIGMARESDGRVAI ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LTPGPLNETYYEHAYIARYLGIMLLEGEDLTVSGGRLMVRTVSGLMPISVLWRRLDAAFA ECCCCCCHHHHHHHHHHHHHCEEEECCCCEEECCCEEEEEHHHCCCHHHHHHHHHHHHHC DPLELRSDSQIGTPGLVEAIRQGAVATVNALGSGLMETRALLAFLPKIARELRGEELLLP CCHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC SVATWWCGQASERAHVLANIDRMVVGPALSTRLAFEDDGQTTLGSTLSAGERAELVARIE CHHHHHCCCCCCCHHHHHCCHHHHCCCCHHHEEEECCCCCCHHCCHHCCCHHHHHHHHHH RDGGAFVGQEAVTLSTTPVFVGGWLEPRPASLRVYLARTPEGWTVMPGGFARVGLSLDPT CCCCCEECCCCEEEECCCEEEECCCCCCCCCEEEEEEECCCCCEECCCCHHEECCCCCCH AIAMQRGGQAADVWVVSDRPVERETLLPQEGDSFTRTRPGSLPSRAAENLTWLGRYIERS HHHHHCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC EDTVRILRAYHVRLAETSDPDMPLLADIRDYLEPFGIDVETAIPLGLIGTLDSAVYSAGQ HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHH IRDRFSPDGWLALKDLSKTIHQFAKTVAPGDDATRAMTVILRKLAGFSGLLHENMYRFAG HHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WRFLEIGRRLERGIQIARTLSRLTDPKAPDGALDMMLEIGDSVMTHRRQYPVQAGRRTVI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCHHHHH DLLALDPLNPRSILFQLERLKAEIGLLPSVGGEGHMSPAAKEILQLNTAIAIKEPSDMTA HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCHHH KALDELAYEIGGLYNSLAKAYFG HHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AKGNHKRIRGKPQIHSLLEHYQPIDGVVDEMVDAAGNPRPVWKHFIEALDDLGAEKLGQ CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHH RFARADQYLRDAGVYYRVYDKAGANEREWPLAHVPLLIEDNEWAAISAGLVQRAELFEET HHHHHHHHHHHCCCEEEEEECCCCCCCCCCEEECCEEEECCCCEEHHHHHHHHHHHHHHH IADIYGPNRLIEKGILPAGLIAASPEYLRPVVGTTPAGGHYLHFCAFELGRGPDGQWWVL HHHHCCCHHHHHHCCCCCHHHHCCHHHHHHHHCCCCCCCCEEEEEHHHHCCCCCCCEEEE GDRTQAPSGAGFALENRVATTRALSDIYGEMHVHRLAGFFRRFRDALIGMARESDGRVAI ECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEE LTPGPLNETYYEHAYIARYLGIMLLEGEDLTVSGGRLMVRTVSGLMPISVLWRRLDAAFA ECCCCCCHHHHHHHHHHHHHCEEEECCCCEEECCCEEEEEHHHCCCHHHHHHHHHHHHHC DPLELRSDSQIGTPGLVEAIRQGAVATVNALGSGLMETRALLAFLPKIARELRGEELLLP CCHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECC SVATWWCGQASERAHVLANIDRMVVGPALSTRLAFEDDGQTTLGSTLSAGERAELVARIE CHHHHHCCCCCCCHHHHHCCHHHHCCCCHHHEEEECCCCCCHHCCHHCCCHHHHHHHHHH RDGGAFVGQEAVTLSTTPVFVGGWLEPRPASLRVYLARTPEGWTVMPGGFARVGLSLDPT CCCCCEECCCCEEEECCCEEEECCCCCCCCCEEEEEEECCCCCEECCCCHHEECCCCCCH AIAMQRGGQAADVWVVSDRPVERETLLPQEGDSFTRTRPGSLPSRAAENLTWLGRYIERS HHHHHCCCCEEEEEEECCCCCCHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCC EDTVRILRAYHVRLAETSDPDMPLLADIRDYLEPFGIDVETAIPLGLIGTLDSAVYSAGQ HHHHHHHHHHHHHEECCCCCCCCHHHHHHHHHHHCCCCHHHCCCHHHHHHHHHHHHHHHH IRDRFSPDGWLALKDLSKTIHQFAKTVAPGDDATRAMTVILRKLAGFSGLLHENMYRFAG HHHCCCCCCCEEHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC WRFLEIGRRLERGIQIARTLSRLTDPKAPDGALDMMLEIGDSVMTHRRQYPVQAGRRTVI HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHCHHHHH DLLALDPLNPRSILFQLERLKAEIGLLPSVGGEGHMSPAAKEILQLNTAIAIKEPSDMTA HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCEEEEECCCCHHH KALDELAYEIGGLYNSLAKAYFG HHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]