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The map label for this gene is 13472543

Identifier: 13472543

GI number: 13472543

Start: 2309228

End: 2310094

Strand: Reverse

Name: 13472543

Synonym: mll2873

Alternate gene names: NA

Gene position: 2310094-2309228 (Counterclockwise)

Preceding gene: 13472544

Following gene: 13472542

Centisome position: 32.83

GC content: 64.36

Gene sequence:

>867_bases
ATGCTGCAGAGATCCGGATTGCCGCCAGGCCGGTCAACCGACGGTGACGCCGCGCCGAAGAACGGGGCGCAAAGCGCGGC
CGAGCACGCCGCACTGACCTATGTCAGCGATGCGGAGCCCGGTATCCGCCGTCTGAAGACAGGCAAGGGATTTTCCTACA
AGGGACCGGACGGGAAAGCAGTCTCGGATGCCGCCAGGGCGCGTATCGAGGCGATCGTCATCCCGCCGGCCTGGACGGAT
GTCTGGATCTCGCTCGATGCCAACGGGCACATCCAGGCGACCGGCAGGGATCAGCGGGGGCGCAAGCAGTATCGCTATCA
TCCGCAATGGGCCAAAGAACGCGACGGTGCCAAATATTCGAGCCTCGTTGCCTTCGCCGAAAGCTTGGCCAGCTTGAGGC
GCACGATAGACAGCGATTTGCGCCGCCACGGCCTGCCGTTCGAGCGCGTCGTCGCCGCGGTCGTCTGGCTGCTCGACAAC
ACGATGATCCGCGTCGGCAATGCCGCCTATGCACGCGACAACCAGAGCTTCGGCCTGACAACGTTGCGCGACCGCCATGT
CGATATCAAGGGATCGAGCCTACGCTTCGCCTTCAAGGGCAAGTCCGGCAAGGAATGGAAACTGAGGCTGGTCGATCGCC
GTATCGCCGGCATCGTGCGGGGTGCGCAGGACCTGCCGGGCCAGAAACTGTTCCAGTATCTCGACGAGGACGGCAGCAGA
CGCCCGATCCGCTCCGCTACATCAGGGACGCCGCCGGCGATGCGTTCAGCTCCAAGCATTTTCGCAGCTGGGGCGGCACC
ATCCATGCCGCGTCGCTGTTTGCACAGACGGAGCTGCCCGAAGCCCAGGCCCAGCAAAAGCGGGTGA

Upstream 100 bases:

>100_bases
AGGTTCCGCCACTCGCTTACCGCGGCCAGCCGACTTTTGCGCGGGCGTGGAACCAGCTGTCGGTCAGCAGCTTATCTACG
CATATTTGCGTGGAGCTTAC

Downstream 100 bases:

>100_bases
TGAACAGCGTCATCGACACGGTGGCCGAGCGGCTGGGCAATACCCGCGCCGTCTGCCGCAAATGCTATATTCATCCGCAG
GTTTTCGAGGCCTGGTTGCA

Product: hypothetical protein

Products: NA

Alternate protein names: DNA poisomerase I; DNA poisomerase Type I; DNA poisomerase IB; Type I poisomerase; DNA poisomerase I Protein; Poisomerase IB; Poisomerase IB-Like Protein; DNA poisomerase I-Like Protein; Viral-Like DNA poisomerase; DNA poisomerase ; Eukaryotic-Like DNA poisomerase I; DNA poisomerasei; -Like DNA poisomerase I; Type I DNA poisomerase

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MLQRSGLPPGRSTDGDAAPKNGAQSAAEHAALTYVSDAEPGIRRLKTGKGFSYKGPDGKAVSDAARARIEAIVIPPAWTD
VWISLDANGHIQATGRDQRGRKQYRYHPQWAKERDGAKYSSLVAFAESLASLRRTIDSDLRRHGLPFERVVAAVVWLLDN
TMIRVGNAAYARDNQSFGLTTLRDRHVDIKGSSLRFAFKGKSGKEWKLRLVDRRIAGIVRGAQDLPGQKLFQYLDEDGSR
RPIRSATSGTPPAMRSAPSIFAAGAAPSMPRRCLHRRSCPKPRPSKSG

Sequences:

>Translated_288_residues
MLQRSGLPPGRSTDGDAAPKNGAQSAAEHAALTYVSDAEPGIRRLKTGKGFSYKGPDGKAVSDAARARIEAIVIPPAWTD
VWISLDANGHIQATGRDQRGRKQYRYHPQWAKERDGAKYSSLVAFAESLASLRRTIDSDLRRHGLPFERVVAAVVWLLDN
TMIRVGNAAYARDNQSFGLTTLRDRHVDIKGSSLRFAFKGKSGKEWKLRLVDRRIAGIVRGAQDLPGQKLFQYLDEDGSR
RPIRSATSGTPPAMRSAPSIFAAGAAPSMPRRCLHRRSCPKPRPSKSG
>Mature_288_residues
MLQRSGLPPGRSTDGDAAPKNGAQSAAEHAALTYVSDAEPGIRRLKTGKGFSYKGPDGKAVSDAARARIEAIVIPPAWTD
VWISLDANGHIQATGRDQRGRKQYRYHPQWAKERDGAKYSSLVAFAESLASLRRTIDSDLRRHGLPFERVVAAVVWLLDN
TMIRVGNAAYARDNQSFGLTTLRDRHVDIKGSSLRFAFKGKSGKEWKLRLVDRRIAGIVRGAQDLPGQKLFQYLDEDGSR
RPIRSATSGTPPAMRSAPSIFAAGAAPSMPRRCLHRRSCPKPRPSKSG

Specific function: Unknown

COG id: COG3569

COG function: function code L; Topoisomerase IB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31568; Mature: 31568

Theoretical pI: Translated: 11.24; Mature: 11.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQRSGLPPGRSTDGDAAPKNGAQSAAEHAALTYVSDAEPGIRRLKTGKGFSYKGPDGKA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHCCCCCCCCCCCCCH
VSDAARARIEAIVIPPAWTDVWISLDANGHIQATGRDQRGRKQYRYHPQWAKERDGAKYS
HHHHHHCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCHHCCCCCCHHHHCCCCHHH
SLVAFAESLASLRRTIDSDLRRHGLPFERVVAAVVWLLDNTMIRVGNAAYARDNQSFGLT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCE
TLRDRHVDIKGSSLRFAFKGKSGKEWKLRLVDRRIAGIVRGAQDLPGQKLFQYLDEDGSR
EECCCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC
RPIRSATSGTPPAMRSAPSIFAAGAAPSMPRRCLHRRSCPKPRPSKSG
CCCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MLQRSGLPPGRSTDGDAAPKNGAQSAAEHAALTYVSDAEPGIRRLKTGKGFSYKGPDGKA
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHEEEECCCCHHHHHHHCCCCCCCCCCCCCH
VSDAARARIEAIVIPPAWTDVWISLDANGHIQATGRDQRGRKQYRYHPQWAKERDGAKYS
HHHHHHCEEEEEEECCCCCEEEEEECCCCEEEECCCCCCCCHHCCCCCCHHHHCCCCHHH
SLVAFAESLASLRRTIDSDLRRHGLPFERVVAAVVWLLDNTMIRVGNAAYARDNQSFGLT
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCE
TLRDRHVDIKGSSLRFAFKGKSGKEWKLRLVDRRIAGIVRGAQDLPGQKLFQYLDEDGSR
EECCCEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCC
RPIRSATSGTPPAMRSAPSIFAAGAAPSMPRRCLHRRSCPKPRPSKSG
CCCCCCCCCCCHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA