| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472517
Identifier: 13472517
GI number: 13472517
Start: 2278684
End: 2279232
Strand: Reverse
Name: 13472517
Synonym: mll2844
Alternate gene names: NA
Gene position: 2279232-2278684 (Counterclockwise)
Preceding gene: 13472518
Following gene: 13472516
Centisome position: 32.39
GC content: 62.48
Gene sequence:
>549_bases ATGGGTCTGCACATGAGGCGTGGCCTCAAGGCCGCCTGCGCATATGGGGCAATCGCATTCTCGTTGATGTCGCCAGCGTC GGCTCAACAACAGGCGGCTGCTGCTCCAGACGGACCGTCATCGCTGCGCGAAGTCTATCAGGACTGGAGCGTGTCCTGCT CTGTCCAGGAGAATGCCAGGGTCTGTTCGCTTTCACAGGACCAGGTCCAGCAGAATGGCCAAAGGCTGCTTGCCATGGAG ATCCAGAGGCGCGCGGACGGGTCGACGATGGCTACCCTGCTTCTGCCCTTCGGCATCCTGCTCGATCCGGGCGTGACGCC CCAGATCGATGATCAGCCGCCATTGTCTCCGCAGCGCTTCAGGACCTGCCTGCCGACAGGCTGCATCGCGGTGTTTTCCA TTGACCGATCGGTGCTCGGAAAGCTGAGGGTGGGCACGGTGCTGAAGCTCAATGTCACGACAGATGCAGAGACGCCACTG ACATTCCCGGTGTCGCTGCACGGCCTGACCGCGGCGCTCGACCGCATGGTCGCGTTGAGCGCACGGTAA
Upstream 100 bases:
>100_bases TCACGCCCTGGGGCGTGAACTCGGCCGAGACCCGCCGTGAGGCCGAAGACCTCGCCTTGCAGGCCTGCGAGGCGTCAGGG GCCAAATGCAAGATCCGTGA
Downstream 100 bases:
>100_bases GGACAAGGGCGGCGGCCTGCGATGCCGGCCGCCATCGATGCCACCCGCTTCGGCTGGGTTCCATGGAACGTTGGCGTGCC GAGGCCGTCGTCGGGTGCTA
Product: invasion-like protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGLHMRRGLKAACAYGAIAFSLMSPASAQQQAAAAPDGPSSLREVYQDWSVSCSVQENARVCSLSQDQVQQNGQRLLAME IQRRADGSTMATLLLPFGILLDPGVTPQIDDQPPLSPQRFRTCLPTGCIAVFSIDRSVLGKLRVGTVLKLNVTTDAETPL TFPVSLHGLTAALDRMVALSAR
Sequences:
>Translated_182_residues MGLHMRRGLKAACAYGAIAFSLMSPASAQQQAAAAPDGPSSLREVYQDWSVSCSVQENARVCSLSQDQVQQNGQRLLAME IQRRADGSTMATLLLPFGILLDPGVTPQIDDQPPLSPQRFRTCLPTGCIAVFSIDRSVLGKLRVGTVLKLNVTTDAETPL TFPVSLHGLTAALDRMVALSAR >Mature_181_residues GLHMRRGLKAACAYGAIAFSLMSPASAQQQAAAAPDGPSSLREVYQDWSVSCSVQENARVCSLSQDQVQQNGQRLLAMEI QRRADGSTMATLLLPFGILLDPGVTPQIDDQPPLSPQRFRTCLPTGCIAVFSIDRSVLGKLRVGTVLKLNVTTDAETPLT FPVSLHGLTAALDRMVALSAR
Specific function: Unknown
COG id: COG5342
COG function: function code R; Invasion protein B, involved in pathogenesis
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ialB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010642 [H]
Pfam domain/function: PF06776 IalB [H]
EC number: NA
Molecular weight: Translated: 19481; Mature: 19350
Theoretical pI: Translated: 8.22; Mature: 8.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLHMRRGLKAACAYGAIAFSLMSPASAQQQAAAAPDGPSSLREVYQDWSVSCSVQENAR CCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCE VCSLSQDQVQQNGQRLLAMEIQRRADGSTMATLLLPFGILLDPGVTPQIDDQPPLSPQRF EECCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH RTCLPTGCIAVFSIDRSVLGKLRVGTVLKLNVTTDAETPLTFPVSLHGLTAALDRMVALS HHHCCHHHHHEEECCHHHHHHHCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHC AR CC >Mature Secondary Structure GLHMRRGLKAACAYGAIAFSLMSPASAQQQAAAAPDGPSSLREVYQDWSVSCSVQENAR CCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCHHHHHHHHHCCCCEEEECCCCE VCSLSQDQVQQNGQRLLAMEIQRRADGSTMATLLLPFGILLDPGVTPQIDDQPPLSPQRF EECCCHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHH RTCLPTGCIAVFSIDRSVLGKLRVGTVLKLNVTTDAETPLTFPVSLHGLTAALDRMVALS HHHCCHHHHHEEECCHHHHHHHCCCEEEEEEEECCCCCCEEEEEEHHHHHHHHHHHHHHC AR CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11756688 [H]