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The map label for this gene is ytfH [H]

Identifier: 13472499

GI number: 13472499

Start: 2258165

End: 2258563

Strand: Reverse

Name: ytfH [H]

Synonym: mll2818

Alternate gene names: 13472499

Gene position: 2258563-2258165 (Counterclockwise)

Preceding gene: 13472501

Following gene: 13472497

Centisome position: 32.1

GC content: 62.66

Gene sequence:

>399_bases
ATGGATAGTGATGACGACTCCCCTTTCGGCTATGATGCGTTCCGGCGGACCTGCCCTTCGCACACGGTGCTCGAGATGCT
GGCCAGCAAATGGGTCTATCTGGTGGTGTGCGCGCTGCGCAAAGGCCGGCTGCGCAATGGCGAACTTGCCCGCAAGCTCG
AAGGCATCACGCCCAAGATGCTGGCGCAGACATTGCGCGTGCTGGAGCGTGACGGCCTGGTGCGGCGTGAGATCTTTCCG
GTCATTCCGCCGCGCGTCGAATATGAATTGACCGAGCTCGGCCAGAATCTGGGGGGACTGCTGACCCAGATCAGGGCATG
GGCGGAGCAGCACGCGCCTGACATCAAGGATGCCCGCGCCAAGGCGATTGCCTTCAGTGAAGGGGATTGGGCCGCCTAG

Upstream 100 bases:

>100_bases
ACGGCACGCATGGTATCTCTCCTGCTTGGTTGGTGCCGCTATCATTTGGATAGTAATATTACCTTGTCCAGTATGTACCT
TTTTGATATATACGTACCCC

Downstream 100 bases:

>100_bases
ATTGGGGATCTCGCGGCAAGAGGTCGGTTCGGGCCGATGGCCCGATGGGTTACCCGCCCGCCGATGGTGCCGATCTCGAC
CGGTTCAGCCGATCATGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MDSDDDSPFGYDAFRRTCPSHTVLEMLASKWVYLVVCALRKGRLRNGELARKLEGITPKMLAQTLRVLERDGLVRREIFP
VIPPRVEYELTELGQNLGGLLTQIRAWAEQHAPDIKDARAKAIAFSEGDWAA

Sequences:

>Translated_132_residues
MDSDDDSPFGYDAFRRTCPSHTVLEMLASKWVYLVVCALRKGRLRNGELARKLEGITPKMLAQTLRVLERDGLVRREIFP
VIPPRVEYELTELGQNLGGLLTQIRAWAEQHAPDIKDARAKAIAFSEGDWAA
>Mature_132_residues
MDSDDDSPFGYDAFRRTCPSHTVLEMLASKWVYLVVCALRKGRLRNGELARKLEGITPKMLAQTLRVLERDGLVRREIFP
VIPPRVEYELTELGQNLGGLLTQIRAWAEQHAPDIKDARAKAIAFSEGDWAA

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=112, Percent_Identity=41.0714285714286, Blast_Score=94, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 14909; Mature: 14909

Theoretical pI: Translated: 7.42; Mature: 7.42

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSDDDSPFGYDAFRRTCPSHTVLEMLASKWVYLVVCALRKGRLRNGELARKLEGITPKM
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHH
LAQTLRVLERDGLVRREIFPVIPPRVEYELTELGQNLGGLLTQIRAWAEQHAPDIKDARA
HHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KAIAFSEGDWAA
HHHCCCCCCCCC
>Mature Secondary Structure
MDSDDDSPFGYDAFRRTCPSHTVLEMLASKWVYLVVCALRKGRLRNGELARKLEGITPKM
CCCCCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHH
LAQTLRVLERDGLVRREIFPVIPPRVEYELTELGQNLGGLLTQIRAWAEQHAPDIKDARA
HHHHHHHHHHCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KAIAFSEGDWAA
HHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503 [H]