Click here to switch to the map view.

The map label for this gene is abrB [H]

Identifier: 13472474

GI number: 13472474

Start: 2233965

End: 2235017

Strand: Direct

Name: abrB [H]

Synonym: mlr2782

Alternate gene names: 13472474

Gene position: 2233965-2235017 (Clockwise)

Preceding gene: 13472473

Following gene: 13472476

Centisome position: 31.75

GC content: 66.95

Gene sequence:

>1053_bases
ATGGCGCGGATACCCAAGCCTTGGCAATGGCTGGTCCTGCTCACCATCTCGGCCCTGTTTGCCGGCGCGCTCGAATTCGC
CGCTCTGCCGGCGGCGCTGCTGATCGGACCGATGCTGGCGGCGATTGTCGCCGGCACCAATGGCGCGACGGTGCGGGTGC
CTCGCCTGCTGTTCGGCTCCGCCCAGGCCATTGTCGGCTGCCTCGTCGCCGCGTCGATCTCGGCCGACATCTTTCCCGTG
TTCTACCAGGAATGGCCGCTGTTCCTCGGTGTGGTGATCGCCACCGTCGCGGCCTCCAGCCTGCTTGGCTGGCTGATCAG
CCGCTGGCGCATCCTGCCCGGCACCACCGCCGTCTGGGGCTCCTCGCCTGGCGCCGCCACCGCCATGGTGCTGATGGCCG
GCGCTTTTGGCGCCGACCAGCGCCTCGTCGCCTTCATGCAATATCTGCGGGTCATCTTCGTTTCGATGACGGCGGCGATT
GTCGCCAAGATGTGGGTCGACACGTCGGGCATCGAAGTCCCACCCATCATCTGGTTTCCGCCGATCGATGTCCAAGCCTT
CGCCGCCACGTCAGGCATCGCGCTGGTCGGCGGCCTTGCGGGGAAGCTGTGCCGGCTGCCCTCGCCCTTCTTCCTCGGCA
CCTTCATCTTCGGCGCCATCGTCCATCTCGGCCTCGGCGTCGAGATGCAGTTGCCCCCCTGGCTGCTGGCGATCAGCTAC
GCCATGGTAGGCTGGTCGATCGGGCTGAACTTCACAAGGCCGATCCTGCGCCATGCGACGCGCGCTCTGCCGCAGATCAT
CGCCTCGATCGTGGCGCTCATAGCCTTTTGCGGCGGGCTCGCCTTCCTGATCAGCCATCTCCTGGGCATCGATCCGCTGA
CCGCCTATCTGGCGACCAGCCCCGGCGGCATGGACAGTGTCGCCATCATCGCCGCCGCGGCGCAGCACGTCGACATCTCC
TTCGTCATGGCGCTGCAATCGGCCCGCTTCCTGATCGTGCTGCTCGTCGGCCCGAGCGTCGCCCGGCTGGTGGCCAGAAG
CATCAGGGACTGA

Upstream 100 bases:

>100_bases
CTTTTTTCAGCACGGCGGGGTTCGCATCGCCGTGCTTCGCGTCTAAGACCGAAACATGGATTCCTCGGCGCAACCTCCCG
ATCAGCCCGCCACTGAGCGC

Downstream 100 bases:

>100_bases
CAGGCTTCAGCGCTTTCGGTGCCCACTCTTCACCGCCGCTGTATTCGGCGCCGCCGCAAGCCGCTCGGGAAGGAAATCGA
CGAAGACGCGAACTTTTGGC

Product: hypothetical protein

Products: NA

Alternate protein names: AidB regulator [H]

Number of amino acids: Translated: 350; Mature: 349

Protein sequence:

>350_residues
MARIPKPWQWLVLLTISALFAGALEFAALPAALLIGPMLAAIVAGTNGATVRVPRLLFGSAQAIVGCLVAASISADIFPV
FYQEWPLFLGVVIATVAASSLLGWLISRWRILPGTTAVWGSSPGAATAMVLMAGAFGADQRLVAFMQYLRVIFVSMTAAI
VAKMWVDTSGIEVPPIIWFPPIDVQAFAATSGIALVGGLAGKLCRLPSPFFLGTFIFGAIVHLGLGVEMQLPPWLLAISY
AMVGWSIGLNFTRPILRHATRALPQIIASIVALIAFCGGLAFLISHLLGIDPLTAYLATSPGGMDSVAIIAAAAQHVDIS
FVMALQSARFLIVLLVGPSVARLVARSIRD

Sequences:

>Translated_350_residues
MARIPKPWQWLVLLTISALFAGALEFAALPAALLIGPMLAAIVAGTNGATVRVPRLLFGSAQAIVGCLVAASISADIFPV
FYQEWPLFLGVVIATVAASSLLGWLISRWRILPGTTAVWGSSPGAATAMVLMAGAFGADQRLVAFMQYLRVIFVSMTAAI
VAKMWVDTSGIEVPPIIWFPPIDVQAFAATSGIALVGGLAGKLCRLPSPFFLGTFIFGAIVHLGLGVEMQLPPWLLAISY
AMVGWSIGLNFTRPILRHATRALPQIIASIVALIAFCGGLAFLISHLLGIDPLTAYLATSPGGMDSVAIIAAAAQHVDIS
FVMALQSARFLIVLLVGPSVARLVARSIRD
>Mature_349_residues
ARIPKPWQWLVLLTISALFAGALEFAALPAALLIGPMLAAIVAGTNGATVRVPRLLFGSAQAIVGCLVAASISADIFPVF
YQEWPLFLGVVIATVAASSLLGWLISRWRILPGTTAVWGSSPGAATAMVLMAGAFGADQRLVAFMQYLRVIFVSMTAAIV
AKMWVDTSGIEVPPIIWFPPIDVQAFAATSGIALVGGLAGKLCRLPSPFFLGTFIFGAIVHLGLGVEMQLPPWLLAISYA
MVGWSIGLNFTRPILRHATRALPQIIASIVALIAFCGGLAFLISHLLGIDPLTAYLATSPGGMDSVAIIAAAAQHVDISF
VMALQSARFLIVLLVGPSVARLVARSIRD

Specific function: Seems to be involved in the regulation of AidB [H]

COG id: COG3180

COG function: function code R; Putative ammonia monooxygenase

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AbrB family [H]

Homologues:

Organism=Escherichia coli, GI87081776, Length=338, Percent_Identity=44.6745562130178, Blast_Score=265, Evalue=2e-72,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017516
- InterPro:   IPR007820 [H]

Pfam domain/function: PF05145 AmoA [H]

EC number: NA

Molecular weight: Translated: 36813; Mature: 36681

Theoretical pI: Translated: 9.97; Mature: 9.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARIPKPWQWLVLLTISALFAGALEFAALPAALLIGPMLAAIVAGTNGATVRVPRLLFGS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCC
AQAIVGCLVAASISADIFPVFYQEWPLFLGVVIATVAASSLLGWLISRWRILPGTTAVWG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECC
SSPGAATAMVLMAGAFGADQRLVAFMQYLRVIFVSMTAAIVAKMWVDTSGIEVPPIIWFP
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
PIDVQAFAATSGIALVGGLAGKLCRLPSPFFLGTFIFGAIVHLGLGVEMQLPPWLLAISY
CCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHH
AMVGWSIGLNFTRPILRHATRALPQIIASIVALIAFCGGLAFLISHLLGIDPLTAYLATS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
PGGMDSVAIIAAAAQHVDISFVMALQSARFLIVLLVGPSVARLVARSIRD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCC
>Mature Secondary Structure 
ARIPKPWQWLVLLTISALFAGALEFAALPAALLIGPMLAAIVAGTNGATVRVPRLLFGS
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHCC
AQAIVGCLVAASISADIFPVFYQEWPLFLGVVIATVAASSLLGWLISRWRILPGTTAVWG
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCCEEECC
SSPGAATAMVLMAGAFGADQRLVAFMQYLRVIFVSMTAAIVAKMWVDTSGIEVPPIIWFP
CCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEC
PIDVQAFAATSGIALVGGLAGKLCRLPSPFFLGTFIFGAIVHLGLGVEMQLPPWLLAISY
CCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCEECCCHHHHHHHH
AMVGWSIGLNFTRPILRHATRALPQIIASIVALIAFCGGLAFLISHLLGIDPLTAYLATS
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCC
PGGMDSVAIIAAAAQHVDISFVMALQSARFLIVLLVGPSVARLVARSIRD
CCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8905232; 9278503; 8002588 [H]