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The map label for this gene is glxA [H]

Identifier: 13472461

GI number: 13472461

Start: 2220520

End: 2221506

Strand: Direct

Name: glxA [H]

Synonym: mlr2766

Alternate gene names: 13472461

Gene position: 2220520-2221506 (Clockwise)

Preceding gene: 13472459

Following gene: 13472463

Centisome position: 31.56

GC content: 66.77

Gene sequence:

>987_bases
ATGACTGATCCGATCATTGCCGTCCTTGCCTTCGACGGCATCAGCCCGTTCCATCTCTCCGTGCCGTGCTTGGTGTTCGG
CGAGGACAGGACCGCGCTTGGGCTGCCACGCTTCGAGTTCCGCATCTGTGCGGTCAAGGCCGGCCCGGTCCACACCGAGG
CCGGATTGACGGTTGCCGCACCGCATGGGCTCGAAGGATTCGACGGCGCCGACATCGTCATCATCCCAAGCTGGCATCAT
CTCGGCGAACCGCCGTCGCCGCTGCTGGTGGAGGCGCTGCGCCAGGCACACCGGCGCGGCGCGTTGATTGTCGGCCTGTG
TCTCGGAACCTTTGCCATTGCCGCGGCCGGGCTGCTTTCAGGCCGCGGTGCCGCGACGCATTGGGCCTATTCCGAGCGGC
TGCAAAAACTCCATCCCGACATCGCTGTCGATGCCACGGTGCTCTATGTCGACAATGGCGATGTCGTGACATCGGCCGGC
GTCGCCGCCGGCCTCGACTGCTGTCTCCACATCGTGCGCGTCCGCTACGGCGCGGAAGCAGCACTCCGGCTCGCCCGCCA
GATCGTGCTCTCACCGCATCGGCAGGGCGGGCAGGCGCAGTTCATCGAATATTCGGTGACAAGAAGCGCAGACGCCGACC
GTTTCACCCAGGCCCTCGACGCGGTTCGCGCCACGCTCGGCGAGGCGCATAGCCTCGACAGCGTCGCCGAAGCCGCCGGT
CTGACACGGCGCACCTTCACCCGCCGCTTCCAGAAATCGATCGGCACCAGTTTTGGCGACTGGCTGACCAACCAGCGCAT
CGAACTGGCGCAGCGCCTGCTGGAGGCGACGGAGAAATCGATGGACATCGTGGCCTTCGAGGCCGGCTTCGGCAGCGCCA
CCTCGCTGCGCCAGCATTTCGCCGCGAGGCTGAGGACATCGCCGGCGCAGTATCGGCGCGAATTCACCCGGCGGGCCGAT
CGGGACGAACGGGTGGCGCAGGCCTGA

Upstream 100 bases:

>100_bases
GATGGGCCGAAAATAAGCCGGTCGATGAGCGGCCAAAAGTGGCCCAGTTGACATCATTCGAAAGAATTGGGACAATCCGC
ATTCAATCCCGGAAGCACCC

Downstream 100 bases:

>100_bases
TTGCTTGCGGCGGGAATTCAGCCGCGCTTGACCGGTCGCGCCGGATTGCCGACCGCCGTCTCGTTTGCAGGCACATCACG
CGTCACCACCGCGCCGGCGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 328; Mature: 327

Protein sequence:

>328_residues
MTDPIIAVLAFDGISPFHLSVPCLVFGEDRTALGLPRFEFRICAVKAGPVHTEAGLTVAAPHGLEGFDGADIVIIPSWHH
LGEPPSPLLVEALRQAHRRGALIVGLCLGTFAIAAAGLLSGRGAATHWAYSERLQKLHPDIAVDATVLYVDNGDVVTSAG
VAAGLDCCLHIVRVRYGAEAALRLARQIVLSPHRQGGQAQFIEYSVTRSADADRFTQALDAVRATLGEAHSLDSVAEAAG
LTRRTFTRRFQKSIGTSFGDWLTNQRIELAQRLLEATEKSMDIVAFEAGFGSATSLRQHFAARLRTSPAQYRREFTRRAD
RDERVAQA

Sequences:

>Translated_328_residues
MTDPIIAVLAFDGISPFHLSVPCLVFGEDRTALGLPRFEFRICAVKAGPVHTEAGLTVAAPHGLEGFDGADIVIIPSWHH
LGEPPSPLLVEALRQAHRRGALIVGLCLGTFAIAAAGLLSGRGAATHWAYSERLQKLHPDIAVDATVLYVDNGDVVTSAG
VAAGLDCCLHIVRVRYGAEAALRLARQIVLSPHRQGGQAQFIEYSVTRSADADRFTQALDAVRATLGEAHSLDSVAEAAG
LTRRTFTRRFQKSIGTSFGDWLTNQRIELAQRLLEATEKSMDIVAFEAGFGSATSLRQHFAARLRTSPAQYRREFTRRAD
RDERVAQA
>Mature_327_residues
TDPIIAVLAFDGISPFHLSVPCLVFGEDRTALGLPRFEFRICAVKAGPVHTEAGLTVAAPHGLEGFDGADIVIIPSWHHL
GEPPSPLLVEALRQAHRRGALIVGLCLGTFAIAAAGLLSGRGAATHWAYSERLQKLHPDIAVDATVLYVDNGDVVTSAGV
AAGLDCCLHIVRVRYGAEAALRLARQIVLSPHRQGGQAQFIEYSVTRSADADRFTQALDAVRATLGEAHSLDSVAEAAGL
TRRTFTRRFQKSIGTSFGDWLTNQRIELAQRLLEATEKSMDIVAFEAGFGSATSLRQHFAARLRTSPAQYRREFTRRADR
DERVAQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35500; Mature: 35369

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS00041 HTH_ARAC_FAMILY_1 ; PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDPIIAVLAFDGISPFHLSVPCLVFGEDRTALGLPRFEFRICAVKAGPVHTEAGLTVAA
CCCCEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEC
PHGLEGFDGADIVIIPSWHHLGEPPSPLLVEALRQAHRRGALIVGLCLGTFAIAAAGLLS
CCCCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
GRGAATHWAYSERLQKLHPDIAVDATVLYVDNGDVVTSAGVAAGLDCCLHIVRVRYGAEA
CCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHCHHH
ALRLARQIVLSPHRQGGQAQFIEYSVTRSADADRFTQALDAVRATLGEAHSLDSVAEAAG
HHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LTRRTFTRRFQKSIGTSFGDWLTNQRIELAQRLLEATEKSMDIVAFEAGFGSATSLRQHF
CHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
AARLRTSPAQYRREFTRRADRDERVAQA
HHHHCCCHHHHHHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
TDPIIAVLAFDGISPFHLSVPCLVFGEDRTALGLPRFEFRICAVKAGPVHTEAGLTVAA
CCCEEEEEEECCCCCCEEECCEEEECCCCCCCCCCCEEEEEEEEECCCCCCCCCEEEEC
PHGLEGFDGADIVIIPSWHHLGEPPSPLLVEALRQAHRRGALIVGLCLGTFAIAAAGLLS
CCCCCCCCCCCEEEECCHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHC
GRGAATHWAYSERLQKLHPDIAVDATVLYVDNGDVVTSAGVAAGLDCCLHIVRVRYGAEA
CCCCHHHHHHHHHHHHHCCCCEEEEEEEEEECCCEEECCHHHHHHHHHHHHHHHHHCHHH
ALRLARQIVLSPHRQGGQAQFIEYSVTRSADADRFTQALDAVRATLGEAHSLDSVAEAAG
HHHHHHHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LTRRTFTRRFQKSIGTSFGDWLTNQRIELAQRLLEATEKSMDIVAFEAGFGSATSLRQHF
CHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHH
AARLRTSPAQYRREFTRRADRDERVAQA
HHHHCCCHHHHHHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]