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The map label for this gene is clpS

Identifier: 13472441

GI number: 13472441

Start: 2199260

End: 2199565

Strand: Reverse

Name: clpS

Synonym: mll2736

Alternate gene names: 13472441

Gene position: 2199565-2199260 (Counterclockwise)

Preceding gene: 13472442

Following gene: 13472436

Centisome position: 31.26

GC content: 62.75

Gene sequence:

>306_bases
ATGCCAGAAATCACCACAAAACCGCGAACCAAGGTCAAGCCGCAGACCGAGCGGCCCAAGCTCTACAAGGTCATCCTCAT
CAATGACGATTTCACGCCGCGCGAATTCGTCGTCACGGTGCTGAAGGGCGAGTTCAAGCTCAGCGAGGACCAGGCGCACC
GCATCATGATCACCGCACACCGGCGCGGCGTCTGCGTGGTCGCGGTCTTCACCAAGGATGTCGCCGAGACCAAGGCGACA
CGGGCCACCGACGCCGGCAAGGCCAAGGGCTACCCGCTGCTGTTCACGACCGAGCCGGAGGAGTGA

Upstream 100 bases:

>100_bases
GGCCGCCCCGCCGGCGGTCCGCCTGCCAATCAAAATGGACGATCGCTGCCGCCCGTGGCAAAATAGCGGGTGAAGCCCGA
TCGCGAAACTGTCGGTTCCG

Downstream 100 bases:

>100_bases
GTGATCGCTTCGCCGCAGGCGAATTCATCGTGCCAGTGGCACGATGAAAGGTCTTGAACGCTGGGGAGTTGCCGCAGGCA
CCGGGGCCCCGGCAGACGCC

Product: ATP-dependent Clp protease adaptor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MPEITTKPRTKVKPQTERPKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRIMITAHRRGVCVVAVFTKDVAETKAT
RATDAGKAKGYPLLFTTEPEE

Sequences:

>Translated_101_residues
MPEITTKPRTKVKPQTERPKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRIMITAHRRGVCVVAVFTKDVAETKAT
RATDAGKAKGYPLLFTTEPEE
>Mature_100_residues
PEITTKPRTKVKPQTERPKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRIMITAHRRGVCVVAVFTKDVAETKATR
ATDAGKAKGYPLLFTTEPEE

Specific function: Involved in the modulation of the specificity of the ClpAP-mediated ATP-dependent protein degradation

COG id: COG2127

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ClpS family

Homologues:

Organism=Escherichia coli, GI1787108, Length=92, Percent_Identity=41.304347826087, Blast_Score=75, Evalue=6e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CLPS2_RHILO (Q98HS2)

Other databases:

- EMBL:   BA000012
- RefSeq:   NP_104008.1
- ProteinModelPortal:   Q98HS2
- SMR:   Q98HS2
- GeneID:   1226669
- GenomeReviews:   BA000012_GR
- KEGG:   mlo:mll2736
- NMPDR:   fig|266835.1.peg.2112
- HOGENOM:   HBG644923
- OMA:   CVVAVFT
- ProtClustDB:   PRK13019
- HAMAP:   MF_00302
- InterPro:   IPR022935
- InterPro:   IPR003769
- InterPro:   IPR014719
- Gene3D:   G3DSA:3.30.1390.10

Pfam domain/function: PF02617 ClpS; SSF54736 Ribosomal_L7/12_C/ClpS-like

EC number: NA

Molecular weight: Translated: 11445; Mature: 11314

Theoretical pI: Translated: 9.92; Mature: 9.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEITTKPRTKVKPQTERPKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRIMITAH
CCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHEEEEEECCCEEECCCCCEEEEEEEC
RRGVCVVAVFTKDVAETKATRATDAGKAKGYPLLFTTEPEE
CCCEEEEEEECCCCHHHHCCCCCCCCCCCCCEEEEEECCCC
>Mature Secondary Structure 
PEITTKPRTKVKPQTERPKLYKVILINDDFTPREFVVTVLKGEFKLSEDQAHRIMITAH
CCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHEEEEEECCCEEECCCCCEEEEEEEC
RRGVCVVAVFTKDVAETKATRATDAGKAKGYPLLFTTEPEE
CCCEEEEEEECCCCHHHHCCCCCCCCCCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11214968