| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13472378
Identifier: 13472378
GI number: 13472378
Start: 2142555
End: 2142995
Strand: Reverse
Name: 13472378
Synonym: mll2655
Alternate gene names: NA
Gene position: 2142995-2142555 (Counterclockwise)
Preceding gene: 13472381
Following gene: 13472373
Centisome position: 30.46
GC content: 68.25
Gene sequence:
>441_bases ATGGCGAGGATCGCGATCGGGATCGAGGGAGAAATCGGCATGAAATTCCTGGCGTCGGTTTTTTCGCGGCAAGGGTTTGC CGTCCTGTTCCTGGCGGCGCTTCTGGCCGCCTGCACCGTGGTCGTCGATGACGGGCCGGGACCACGCCCGCGTCCGCCGC GTCCCGAACCCAAATTCTGCACCATGCAGTATGAGCCGGTCTGCGCCCGGCGTGGCGGCGACAGCCAGACCTTCGCCAAT GCCTGCCTTGCCGACCGCGCCGGCTACCGCATCGTGCGCGACGGCCCCTGCCGCGGCGGTGGTGGCGGTGAAGAGCAGAC GTTCTGCACCCGCGAATACGCGCCCGTCTGCGGCCGCCGCCATGGCGAGATGCGCAGCTTCCCCAATGCCTGCGAAGCCC GCGCGGCGGACTATCGTATCGTCGGTGATGGCCCGTGCTGA
Upstream 100 bases:
>100_bases GCGCGCATGGGCCAGTTTTGCTGGCGAACGCCGGCCATGATGCAACCGCCATTTCCTCGCGAACGCGGTTGCATCCGACA GGGTTGCATTTGACAGGGGA
Downstream 100 bases:
>100_bases GACGGCGCTACTTTGCCACCCCAGTATGGGCCTAGGACTTCAGCAGGGTGGCCAGATGGGCGGCGTTTGATGCGGCGCCT ACGTTTCCGCAGGATACGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein Transmembrane
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MARIAIGIEGEIGMKFLASVFSRQGFAVLFLAALLAACTVVVDDGPGPRPRPPRPEPKFCTMQYEPVCARRGGDSQTFAN ACLADRAGYRIVRDGPCRGGGGGEEQTFCTREYAPVCGRRHGEMRSFPNACEARAADYRIVGDGPC
Sequences:
>Translated_146_residues MARIAIGIEGEIGMKFLASVFSRQGFAVLFLAALLAACTVVVDDGPGPRPRPPRPEPKFCTMQYEPVCARRGGDSQTFAN ACLADRAGYRIVRDGPCRGGGGGEEQTFCTREYAPVCGRRHGEMRSFPNACEARAADYRIVGDGPC >Mature_145_residues ARIAIGIEGEIGMKFLASVFSRQGFAVLFLAALLAACTVVVDDGPGPRPRPPRPEPKFCTMQYEPVCARRGGDSQTFANA CLADRAGYRIVRDGPCRGGGGGEEQTFCTREYAPVCGRRHGEMRSFPNACEARAADYRIVGDGPC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15691; Mature: 15560
Theoretical pI: Translated: 8.14; Mature: 8.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 8.9 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 8.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARIAIGIEGEIGMKFLASVFSRQGFAVLFLAALLAACTVVVDDGPGPRPRPPRPEPKFC CCEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEE TMQYEPVCARRGGDSQTFANACLADRAGYRIVRDGPCRGGGGGEEQTFCTREYAPVCGRR EEECCCHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCHHCCHHCCC HGEMRSFPNACEARAADYRIVGDGPC CCCHHCCCCHHHHCCCCEEEECCCCC >Mature Secondary Structure ARIAIGIEGEIGMKFLASVFSRQGFAVLFLAALLAACTVVVDDGPGPRPRPPRPEPKFC CEEEEECCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHEEEECCCCCCCCCCCCCCCCEE TMQYEPVCARRGGDSQTFANACLADRAGYRIVRDGPCRGGGGGEEQTFCTREYAPVCGRR EEECCCHHHCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEECCHHCCHHCCC HGEMRSFPNACEARAADYRIVGDGPC CCCHHCCCCHHHHCCCCEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA