Click here to switch to the map view.

The map label for this gene is 13472287

Identifier: 13472287

GI number: 13472287

Start: 2052824

End: 2053300

Strand: Reverse

Name: 13472287

Synonym: mll2531

Alternate gene names: NA

Gene position: 2053300-2052824 (Counterclockwise)

Preceding gene: 13472289

Following gene: 13472285

Centisome position: 29.18

GC content: 55.35

Gene sequence:

>477_bases
ATGCGCTACGAACTCACCGACCATGAATGGACCGCCATCAAGCCGATGCTGCCGAACAAGCCGCGTGGCGTTCCTCGGGT
GAACGACAGACGGGTCCTGAATGGCATCTTCTGGGTCCTCCGATCAGGAGCACCCTGGCGTGATCTGCCAACGGCGTTTG
GCCCATACACCACTTGCTACAACCGCTTCGTTAGGTGGCGGCGGGCCGGTGTTTGGGGCCGCATGATAGAAGCGCTTGCC
ACTGCCCATGATGGCTCGAATTTCGGCCAACGCCTTTTTGGCAAACCCGTCCAGTCGACCTGCCTTTGCATCGGCCTCGA
TCTGCTTGTCCCATACATCTGCCTGGAACGCCTCGAACCATTTGGCAAAGGCATTCAGCTCTTTGGGGCTCAAGGCTGCT
ATGGATCTTTCGATCTGTTCGAGCTTAGTCATGAATTGGATAGTAACATCATCGAGGTTGCAAAGTTAAATAGCTAA

Upstream 100 bases:

>100_bases
TGTCCGCTCCTGTCCGTAAGCGCCGTGCCAAGAGCGGGCCAGGAGCGTTGCGTTTGGCCGGACTGCCGTGATTCAAACTT
CCGAACTGGAGGCTCGAATC

Downstream 100 bases:

>100_bases
CCCCAGACAAACAAAAAGGCGGGACAAATCCCGCCTTCCCATGCTTGGTAGCCTGATCGGGAGCGTCCGGTCCGGGCTGG
CAGCTATCTGCTGTTCCAGC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase IS4 Family Protein; Transposase OrfA IS5 Family Element; ISBm1 Transposase OrfA; Transposase And Inactivated Derivatives-Like Protein; Transposase Protein; IS5 Family Transposase OrfA; ISPs1 Transposase OrfA; IS5 Family Transposase; Insertion Element Transposase; Transposase Related Protein; Transposase-Like Protein; ISRin4 Transposase OrfA; IS4 Insertion Sequence Transposase Protein; Insertion Sequence; Transposase Is4 Family Protein; IS5 Family Element Transposase OrfA; LOW QUALITY PROTEIN Transposase IS4 Family Protein; ISAca3 Transposase OrfA; Transposase-Related Protein; Mannitol Dehydrogenase Domain-Containing Protein; IS4 Family Transposase; Insertion Sequence Transposase Protein; ISBm1 Transposase; Transposase And Inactivated Derivative; Transposase Of; Transposase Fragment

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MRYELTDHEWTAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPTAFGPYTTCYNRFVRWRRAGVWGRMIEALA
TAHDGSNFGQRLFGKPVQSTCLCIGLDLLVPYICLERLEPFGKGIQLFGAQGCYGSFDLFELSHELDSNIIEVAKLNS

Sequences:

>Translated_158_residues
MRYELTDHEWTAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPTAFGPYTTCYNRFVRWRRAGVWGRMIEALA
TAHDGSNFGQRLFGKPVQSTCLCIGLDLLVPYICLERLEPFGKGIQLFGAQGCYGSFDLFELSHELDSNIIEVAKLNS
>Mature_158_residues
MRYELTDHEWTAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPTAFGPYTTCYNRFVRWRRAGVWGRMIEALA
TAHDGSNFGQRLFGKPVQSTCLCIGLDLLVPYICLERLEPFGKGIQLFGAQGCYGSFDLFELSHELDSNIIEVAKLNS

Specific function: Unknown

COG id: COG3293

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18006; Mature: 18006

Theoretical pI: Translated: 8.74; Mature: 8.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
5.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRYELTDHEWTAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPTAFGPYTTCY
CCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
NRFVRWRRAGVWGRMIEALATAHDGSNFGQRLFGKPVQSTCLCIGLDLLVPYICLERLEP
HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCH
FGKGIQLFGAQGCYGSFDLFELSHELDSNIIEVAKLNS
HCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCC
>Mature Secondary Structure
MRYELTDHEWTAIKPMLPNKPRGVPRVNDRRVLNGIFWVLRSGAPWRDLPTAFGPYTTCY
CCCCCCCCCCEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHH
NRFVRWRRAGVWGRMIEALATAHDGSNFGQRLFGKPVQSTCLCIGLDLLVPYICLERLEP
HHHHHHHHCCHHHHHHHHHHHHCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCH
FGKGIQLFGAQGCYGSFDLFELSHELDSNIIEVAKLNS
HCCCEEEEECCCCCCCHHHHHHHHHHCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA