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The map label for this gene is 13472230

Identifier: 13472230

GI number: 13472230

Start: 1994998

End: 1995636

Strand: Reverse

Name: 13472230

Synonym: mll2454

Alternate gene names: NA

Gene position: 1995636-1994998 (Counterclockwise)

Preceding gene: 13472233

Following gene: 13472229

Centisome position: 28.36

GC content: 66.82

Gene sequence:

>639_bases
ATGGCACTGGACAAGGAAGAAACGGGCGAGCGTGTATTGGCCATTGCCGAAGTGCTGCTCAACGAGGGCGGCATGGACAA
TCTGAAGGCCAGGACCATCGCCGAGCAGGCGGGCATCTCGGTCGGCTCGGTCTACAATCTGTTTTCTGATCTCGACGGGG
TGCATCGTGCCGTCAACATGCGGCTGCTCGACCGGCTGGGGGCCGCAGGGGCCGCGGCGATGGCGGATCTTTCCCAGCGC
GGCATCACCGATGTGCGTCAGCGCCTGCTGGCACTGGCCGGCGCCTATGTGAACTTCGTCGAGGGGCATCCCGGCAGCTG
GCCGGCGCTGCTTGCCTTCAACAGGCGCCGCCCGACGCTGGCCGAGCCGGACGCCTACGAAGCGCGGCTCGACCAGCTGT
TCGAGATCATTGCCGGCGTGCTTGCCGGCGGCGATTTCGACCTCGACGACGACACGCGCCGGATCGCCGCGCGCACATTG
TGGTCAAGCGTGCATGGCATCGTCACCAGCGGTTACGCCGGCAGGTCCGTGCGCCGGCAGGCCGGCGAGATCGACCAGCA
GATCGAGCTGCTGGTCGCCGTCTTCATCAGGGGGCTGGAACGCGGCGGCGCATTCGCGCATGCTGGGACAACAGCGTAG

Upstream 100 bases:

>100_bases
TTTGAACGCTGTTCACGAAATCCCGGATGTGATAAATTGGGGGGAATTCGCGGTTCGAAGCAGCGTGCCGCGCAAGGCAG
GCGCATGCACAAGGATTGAT

Downstream 100 bases:

>100_bases
TGGCTTGACGTTGAAGGTTGACGCGTCGCGCGGATTCGCGAACGTGGCAGATCGGGGCAATGAAGAGCCGGATGATGACG
ACAGTCAAAGATTCAACCCC

Product: transcriptional regulator

Products: NA

Alternate protein names: TetR Family Transcriptional Regulator; Transcriptional Regulator

Number of amino acids: Translated: 212; Mature: 211

Protein sequence:

>212_residues
MALDKEETGERVLAIAEVLLNEGGMDNLKARTIAEQAGISVGSVYNLFSDLDGVHRAVNMRLLDRLGAAGAAAMADLSQR
GITDVRQRLLALAGAYVNFVEGHPGSWPALLAFNRRRPTLAEPDAYEARLDQLFEIIAGVLAGGDFDLDDDTRRIAARTL
WSSVHGIVTSGYAGRSVRRQAGEIDQQIELLVAVFIRGLERGGAFAHAGTTA

Sequences:

>Translated_212_residues
MALDKEETGERVLAIAEVLLNEGGMDNLKARTIAEQAGISVGSVYNLFSDLDGVHRAVNMRLLDRLGAAGAAAMADLSQR
GITDVRQRLLALAGAYVNFVEGHPGSWPALLAFNRRRPTLAEPDAYEARLDQLFEIIAGVLAGGDFDLDDDTRRIAARTL
WSSVHGIVTSGYAGRSVRRQAGEIDQQIELLVAVFIRGLERGGAFAHAGTTA
>Mature_211_residues
ALDKEETGERVLAIAEVLLNEGGMDNLKARTIAEQAGISVGSVYNLFSDLDGVHRAVNMRLLDRLGAAGAAAMADLSQRG
ITDVRQRLLALAGAYVNFVEGHPGSWPALLAFNRRRPTLAEPDAYEARLDQLFEIIAGVLAGGDFDLDDDTRRIAARTLW
SSVHGIVTSGYAGRSVRRQAGEIDQQIELLVAVFIRGLERGGAFAHAGTTA

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22743; Mature: 22612

Theoretical pI: Translated: 5.09; Mature: 5.09

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALDKEETGERVLAIAEVLLNEGGMDNLKARTIAEQAGISVGSVYNLFSDLDGVHRAVNM
CCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RLLDRLGAAGAAAMADLSQRGITDVRQRLLALAGAYVNFVEGHPGSWPALLAFNRRRPTL
HHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCC
AEPDAYEARLDQLFEIIAGVLAGGDFDLDDDTRRIAARTLWSSVHGIVTSGYAGRSVRRQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AGEIDQQIELLVAVFIRGLERGGAFAHAGTTA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
ALDKEETGERVLAIAEVLLNEGGMDNLKARTIAEQAGISVGSVYNLFSDLDGVHRAVNM
CCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
RLLDRLGAAGAAAMADLSQRGITDVRQRLLALAGAYVNFVEGHPGSWPALLAFNRRRPTL
HHHHHHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHEECCCCCCC
AEPDAYEARLDQLFEIIAGVLAGGDFDLDDDTRRIAARTLWSSVHGIVTSGYAGRSVRRQ
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AGEIDQQIELLVAVFIRGLERGGAFAHAGTTA
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA