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The map label for this gene is hspB [H]

Identifier: 13472178

GI number: 13472178

Start: 1943262

End: 1943729

Strand: Reverse

Name: hspB [H]

Synonym: mll2387

Alternate gene names: 13472178

Gene position: 1943729-1943262 (Counterclockwise)

Preceding gene: 13472181

Following gene: 13472177

Centisome position: 27.63

GC content: 58.12

Gene sequence:

>468_bases
ATGAGAACGAACCTGGACCTTTCCCCCTTCTATCGGTCGAGCATCGGCTTTGACCGCATCTTCAACCTGCTCGAAAACGC
CAGCCCACCACAGAACGCGGACAACTGGCCGCCCTACGATATCGCCAAGCTCGGCGAAGACACCTACCGCATTGTCCTCG
CGGTCGCCGGTTTCGGGGAAGACGAGCTTACGATCACGCAGGAGCCAAATATGCTCGTGATCGAGGGCGCCAAGACAGAG
AACGACGAGGTTCAGTACCTCCATCATGGCCTGGCGTTGAGGTCGTTCGCGCGCCGCTTCGAACTAGCCGATCATGTGAC
CATTGTCGGGGCAAAGCTCGAAAACGGTCTGCTGATTATCGACCTCAGGAAAGAAATTCCCGAGGAGATGAAGCCGCGCC
GCATCGCGATCAATGTCGAGAACGACAAGAAGGCGGCGTCCAAGCGCATTGAAAGCGCGGCGGCCTGA

Upstream 100 bases:

>100_bases
CTCATTCTCGTCGGTCGCCGCATAAGGGGCCGATGTGTCAGGGAGCGCCATGCTTCTTGGCGTTCCCTCGTATCTATGTT
GCTCCAAGGAGGATGTAGTT

Downstream 100 bases:

>100_bases
TCTTTGGCGGTCGGCCTGCACCCCGTCCTGTCGTGGCTGGGGACCGGATGCGACCCAAAAACACGGAAAGGAGAAGGACA
AATGAGCGTACGTGACTTGA

Product: small heat shock protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 155; Mature: 155

Protein sequence:

>155_residues
MRTNLDLSPFYRSSIGFDRIFNLLENASPPQNADNWPPYDIAKLGEDTYRIVLAVAGFGEDELTITQEPNMLVIEGAKTE
NDEVQYLHHGLALRSFARRFELADHVTIVGAKLENGLLIIDLRKEIPEEMKPRRIAINVENDKKAASKRIESAAA

Sequences:

>Translated_155_residues
MRTNLDLSPFYRSSIGFDRIFNLLENASPPQNADNWPPYDIAKLGEDTYRIVLAVAGFGEDELTITQEPNMLVIEGAKTE
NDEVQYLHHGLALRSFARRFELADHVTIVGAKLENGLLIIDLRKEIPEEMKPRRIAINVENDKKAASKRIESAAA
>Mature_155_residues
MRTNLDLSPFYRSSIGFDRIFNLLENASPPQNADNWPPYDIAKLGEDTYRIVLAVAGFGEDELTITQEPNMLVIEGAKTE
NDEVQYLHHGLALRSFARRFELADHVTIVGAKLENGLLIIDLRKEIPEEMKPRRIAINVENDKKAASKRIESAAA

Specific function: Unknown

COG id: COG0071

COG function: function code O; Molecular chaperone (small heat shock protein)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the small heat shock protein (HSP20) family [H]

Homologues:

Organism=Escherichia coli, GI1790122, Length=136, Percent_Identity=53.6764705882353, Blast_Score=145, Evalue=1e-36,
Organism=Escherichia coli, GI87082316, Length=136, Percent_Identity=41.9117647058824, Blast_Score=103, Evalue=6e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002068
- InterPro:   IPR008978 [H]

Pfam domain/function: PF00011 HSP20 [H]

EC number: NA

Molecular weight: Translated: 17464; Mature: 17464

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS01031 HSP20

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTNLDLSPFYRSSIGFDRIFNLLENASPPQNADNWPPYDIAKLGEDTYRIVLAVAGFGE
CCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCC
DELTITQEPNMLVIEGAKTENDEVQYLHHGLALRSFARRFELADHVTIVGAKLENGLLII
CCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEE
DLRKEIPEEMKPRRIAINVENDKKAASKRIESAAA
ECHHHCHHHCCCCEEEEEECCCHHHHHHHHHHCCC
>Mature Secondary Structure
MRTNLDLSPFYRSSIGFDRIFNLLENASPPQNADNWPPYDIAKLGEDTYRIVLAVAGFGE
CCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHCCCCCEEEEEEEECCCC
DELTITQEPNMLVIEGAKTENDEVQYLHHGLALRSFARRFELADHVTIVGAKLENGLLII
CCEEEECCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCEEEE
DLRKEIPEEMKPRRIAINVENDKKAASKRIESAAA
ECHHHCHHHCCCCEEEEEECCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8808920; 12597275 [H]