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The map label for this gene is ynhG [C]

Identifier: 13472170

GI number: 13472170

Start: 1928993

End: 1929595

Strand: Direct

Name: ynhG [C]

Synonym: mlr2376

Alternate gene names: 13472170

Gene position: 1928993-1929595 (Clockwise)

Preceding gene: 13472169

Following gene: 13472172

Centisome position: 27.42

GC content: 61.36

Gene sequence:

>603_bases
ATGGCCCGCCTGCAGAGGCTCGGCTATCACAACGTCACGGAGAAGCTGGCCGAGCGCTTCCACATAAGCGAGCAATTGCT
CAGGAGGCTCAATCCGGGCATCGGCTTCAGGAAGGCCGGCACTAAGTTGCTGGTTCCGGATATTGACCGGGGGGATTCTC
CTGCCACGATTGCCGGCATCGAGGTCGACAAGGGCGCACGCCTGGTGCGCGTTCTTGATCCATCCGGTAAATGGCTCGCG
GTCTTTCCCGCTTCCATCGGCAGTGCCGAGAAGCCGGCGCCGGGCGGCGAGGCGGAGGTCAAACGCGTCGTGCGCAATCC
CACCTATCACTACGATCCGCGCTTCGCTTTCAAGGGGGTCAAAGCCAAACGGCCGTTCACGATTGCGGCCGGACCGAACA
ATCCCGTGGGATCGGTCTGGATCGATCTGTCCATCGAGAGCTACGGTATTCACGGCACGCCCGAACCGGGCAAGATCGGC
ACGACCTTCTCGCATGGCTGCATCAGGTTGACCAACTGGGATGCCGAGGACCTCGCCTCCATGGTGCAAAAAGGTACAAA
AGTCAGCTTCAAGGACGAGATGGCGAACGCGGGCGGCGAGTAG

Upstream 100 bases:

>100_bases
GACGGCAACCTCCACCAAACCAGTCTTGATTAGCTACGAACTGACGCGCAAGGATGTGAGCGGACCCTTCACGAAGCGCA
TTCCGGCGCGCATGGAGAGG

Downstream 100 bases:

>100_bases
CTGGTCACTCCACCTCGCTCAGGGAAAGGCCTGCCGAAATCGATATCCAGAGGACCATTTCCGTCAAATGGTCCCCGACA
CCCTCGACGGCTCGTCAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: Spore protein YkuD homolog [H]

Number of amino acids: Translated: 200; Mature: 199

Protein sequence:

>200_residues
MARLQRLGYHNVTEKLAERFHISEQLLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGIEVDKGARLVRVLDPSGKWLA
VFPASIGSAEKPAPGGEAEVKRVVRNPTYHYDPRFAFKGVKAKRPFTIAAGPNNPVGSVWIDLSIESYGIHGTPEPGKIG
TTFSHGCIRLTNWDAEDLASMVQKGTKVSFKDEMANAGGE

Sequences:

>Translated_200_residues
MARLQRLGYHNVTEKLAERFHISEQLLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGIEVDKGARLVRVLDPSGKWLA
VFPASIGSAEKPAPGGEAEVKRVVRNPTYHYDPRFAFKGVKAKRPFTIAAGPNNPVGSVWIDLSIESYGIHGTPEPGKIG
TTFSHGCIRLTNWDAEDLASMVQKGTKVSFKDEMANAGGE
>Mature_199_residues
ARLQRLGYHNVTEKLAERFHISEQLLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGIEVDKGARLVRVLDPSGKWLAV
FPASIGSAEKPAPGGEAEVKRVVRNPTYHYDPRFAFKGVKAKRPFTIAAGPNNPVGSVWIDLSIESYGIHGTPEPGKIGT
TFSHGCIRLTNWDAEDLASMVQKGTKVSFKDEMANAGGE

Specific function: Probable enzyme that may play an important role in cell wall biology [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Spore wall. Note=Probably localized either on the surface of the outer spore membrane and/or in the inner spore coat (By similarity) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=193, Percent_Identity=31.0880829015544, Blast_Score=67, Evalue=9e-13,
Organism=Escherichia coli, GI1787040, Length=193, Percent_Identity=29.0155440414508, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1788299, Length=169, Percent_Identity=32.5443786982249, Blast_Score=61, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 21718; Mature: 21587

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARLQRLGYHNVTEKLAERFHISEQLLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGI
CCCHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCEECCCCEEECCCCCCCCCCCEEEEE
EVDKGARLVRVLDPSGKWLAVFPASIGSAEKPAPGGEAEVKRVVRNPTYHYDPRFAFKGV
EECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCC
KAKRPFTIAAGPNNPVGSVWIDLSIESYGIHGTPEPGKIGTTFSHGCIRLTNWDAEDLAS
CCCCCEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEECCCEEEEECCCHHHHHH
MVQKGTKVSFKDEMANAGGE
HHHCCCCCEEHHHHHCCCCC
>Mature Secondary Structure 
ARLQRLGYHNVTEKLAERFHISEQLLRRLNPGIGFRKAGTKLLVPDIDRGDSPATIAGI
CCHHHCCCHHHHHHHHHHHCHHHHHHHHCCCCCCEECCCCEEECCCCCCCCCCCEEEEE
EVDKGARLVRVLDPSGKWLAVFPASIGSAEKPAPGGEAEVKRVVRNPTYHYDPRFAFKGV
EECCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCEECCC
KAKRPFTIAAGPNNPVGSVWIDLSIESYGIHGTPEPGKIGTTFSHGCIRLTNWDAEDLAS
CCCCCEEEECCCCCCCCEEEEEEEEEECCCCCCCCCCCCCCEECCCEEEEECCCHHHHHH
MVQKGTKVSFKDEMANAGGE
HHHCCCCCEEHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA