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The map label for this gene is ompA [H]

Identifier: 13472165

GI number: 13472165

Start: 1923670

End: 1924173

Strand: Reverse

Name: ompA [H]

Synonym: mll2368

Alternate gene names: 13472165

Gene position: 1924173-1923670 (Counterclockwise)

Preceding gene: 13472167

Following gene: 13472156

Centisome position: 27.35

GC content: 60.71

Gene sequence:

>504_bases
ATGCTTCTTGCAACGCACGTCTTTGCCGATCCGCTTCAGAAATCCGAAGACATCGTGAAGTTCTTCGCCGGCCAGACCGG
CAATCTGGGTGCCGCGCGCGGCATCTGCGTCGGCACGGAGGAAGAGTGCAAGAGCAAGGCCGAGAAGACTGGCTCGGCTG
CACAAAAGACCGGTCTCGACATGATGATCAATTTCGCCCTTGATTCCGCGCAACTCGACCAGACGGCACGCGCCGAACTC
GACGAGTTCGCCAAGGCGCTGAAAGACAATCGGTTGAGCACATTCAGCTTTGTCGTTGAAGGCCACACCGATGCAACCGG
CCCGGATCGCTACAACCAGGACCTGTCGCAGCGGCGGGCCCAGTCGGTGGCGGCCTTCCTCGAAGCGAACGGCGTAGAAT
CGGTGCGGCTCGAAGCGATCGGCCTTGGCAAGTCGCACCCGCGGGTTGCCAATCCTTACGATCCGGTCAACCGGCGCGTG
GAAATGCGCATCAGGACCGAGTAA

Upstream 100 bases:

>100_bases
ACAATCGCTTGCCGATTTGATATGATGCGCGCCAGCGAAATCCTCTTGGACAGGAGTGACGGTCATGCGATTGGGCAGTT
CAGCCTTGGCATTGGCGGCC

Downstream 100 bases:

>100_bases
CGCCGACAGGCCGATCGTCAACAGCGATAGTGGCAAAAGGGAACTCGTCCAACGCGGGTTCCCTTTGACTGGCTGTGATC
AATATCTCATCGCGCCGCCG

Product: hypothetical protein

Products: NA

Alternate protein names: Outer membrane protein II [H]

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLLATHVFADPLQKSEDIVKFFAGQTGNLGAARGICVGTEEECKSKAEKTGSAAQKTGLDMMINFALDSAQLDQTARAEL
DEFAKALKDNRLSTFSFVVEGHTDATGPDRYNQDLSQRRAQSVAAFLEANGVESVRLEAIGLGKSHPRVANPYDPVNRRV
EMRIRTE

Sequences:

>Translated_167_residues
MLLATHVFADPLQKSEDIVKFFAGQTGNLGAARGICVGTEEECKSKAEKTGSAAQKTGLDMMINFALDSAQLDQTARAEL
DEFAKALKDNRLSTFSFVVEGHTDATGPDRYNQDLSQRRAQSVAAFLEANGVESVRLEAIGLGKSHPRVANPYDPVNRRV
EMRIRTE
>Mature_167_residues
MLLATHVFADPLQKSEDIVKFFAGQTGNLGAARGICVGTEEECKSKAEKTGSAAQKTGLDMMINFALDSAQLDQTARAEL
DEFAKALKDNRLSTFSFVVEGHTDATGPDRYNQDLSQRRAQSVAAFLEANGVESVRLEAIGLGKSHPRVANPYDPVNRRV
EMRIRTE

Specific function: Required for the action of colicins K and L and for the stabilization of mating aggregates in conjugation. Serves as a receptor for a number of T-even like phages. Also acts as a porin with low permeability that allows slow penetration of small solutes [H

COG id: COG2885

COG function: function code M; Outer membrane protein and related peptidoglycan-associated (lipo)proteins

Gene ontology:

Cell location: Cell outer membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 OmpA-like domain [H]

Homologues:

Organism=Escherichia coli, GI1787191, Length=103, Percent_Identity=37.8640776699029, Blast_Score=69, Evalue=2e-13,

Paralogues:

None

Copy number: 140 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 2300 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 3380 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1480 Molecules/Cell In: Growth Phase, Mi

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011250
- InterPro:   IPR006664
- InterPro:   IPR002368
- InterPro:   IPR006690
- InterPro:   IPR000498
- InterPro:   IPR006665 [H]

Pfam domain/function: PF00691 OmpA; PF01389 OmpA_membrane [H]

EC number: NA

Molecular weight: Translated: 18246; Mature: 18246

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: PS01068 OMPA_1 ; PS51123 OMPA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLATHVFADPLQKSEDIVKFFAGQTGNLGAARGICVGTEEECKSKAEKTGSAAQKTGLD
CEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHCCCHHHHHCHH
MMINFALDSAQLDQTARAELDEFAKALKDNRLSTFSFVVEGHTDATGPDRYNQDLSQRRA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
QSVAAFLEANGVESVRLEAIGLGKSHPRVANPYDPVNRRVEMRIRTE
HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MLLATHVFADPLQKSEDIVKFFAGQTGNLGAARGICVGTEEECKSKAEKTGSAAQKTGLD
CEEECHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCHHHHHHHHHHCCCHHHHHCHH
MMINFALDSAQLDQTARAELDEFAKALKDNRLSTFSFVVEGHTDATGPDRYNQDLSQRRA
HHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHH
QSVAAFLEANGVESVRLEAIGLGKSHPRVANPYDPVNRRVEMRIRTE
HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1955870 [H]