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The map label for this gene is yebA [H]

Identifier: 13472163

GI number: 13472163

Start: 1919514

End: 1921952

Strand: Direct

Name: yebA [H]

Synonym: mlr2365

Alternate gene names: 13472163

Gene position: 1919514-1921952 (Clockwise)

Preceding gene: 13472162

Following gene: 13472164

Centisome position: 27.28

GC content: 64.7

Gene sequence:

>2439_bases
GTGACGCACAGCATCGACACGAGCTTCAAACAGAAGAAGCTGGCGCGCCTGGCCGAGCGCAGACGCAGACTCTGGCGCCG
CGCTCTTGCAGGCGTTGCAACGCTCACCGTCATAGCGATCGCCACCGGCTTCTATCTTACCAAGGACAACTGGTCGTTCG
GCGACGAGGATGAGGAACTGCATCCCGTCGAAGGCATGGAAGACGTGCCGCCCGACGCCTCGGTCTATGTGCCGGCCATC
ATCGACCTTGCCGGTGACCCGATGTGGATCACGCTTGCGCCCGATGCGGACACCGCCACGAAGGGCCACACGGTTGCGCG
CCCAGCCGAACTCGACAGTTCCGGGGCCTCGCCACAGATCGAGATTCTGTCCGACGTGATGCTGAGCGCCAGCGAGAAGT
TCATGACGACGATCCCGTCGACGCAGGAGGATTTTGCCTTCTTCAAGGCGCAGCGGCAGACTGCTGCGAAGCCTTCAACC
GCTGCACCAGACGATCAGCAACCGACCTCGCCCGCACCTGCTCCCGCGGCGCCCAACGACCAGCCGGGCGATCTGGCGAA
CGACCTGCAGGCGCCGCCGGACGCGGGCGAAATCCCCGCCGGTTCGGCGCCTAAAGCCGACGCAGACGACCCCGAGGCCG
GCTGGGGTGAGACCATCGACCAGGGCGAGGCAGCGCTCCCCGCCTTCAAGAAGACCGCGATCGAGAACAACACCACCGTC
GCGACCGTCACCAGCGAATATCAGCGCTTCGCGGCGACGGAGGACACTTTCGTGAAGATCCTCAACGACCGCAGCCTGGA
TAGCGTGGCGCTCGACGCGCATTTCTCCGCGGACGACGCCAGGCTTGCGGGCGAGGCGCTGAAAGGGCTGTTCAAGCGCG
ATGGGCTCGAGGCCGGTTTCGTGGTCGCCATGCGCGGCTTCCGGCCGAACCGAGAGACGACGACGATGTCGCTGATGCAG
GTCTCGGTCTACGCAAGGAACGTCTATGTCGGTACGCTGACGCGCAACGCAGCTGGCGCCTTCGTTTCGGGCGTCGACCC
CTGGGTTCGCGAGGACCTCTTTAACTATTCCGGTGCCTCGGACCAGGGCGGGCCCAAGCGGCAGTACCGGCTGCTCGACG
CAATCTACTCGACCGCGGCACGCAACAAGGTGCCGACCAGCGTGATCGGCGAAGCGATCATGTATCTGTCGAGGGGACAG
GATCTCGACGCTTTCGCCAGCGAGGACCAGCGCCTGGTGATGATCTACTCGCAGACGCCGCGCGACCAGGGCGAGATCTC
CGGACGGGTGCTTTACGTCGGCGTCCTGGGCAAGGACAAGAACCTCGACTGCTTCGTCTTCCAGCAAAGCGACGGCCAAT
ACGCCTGCGTGACCGGCGATGATCAGGTTCGCTCGCTGAACGTCACCAACGGCATGGTCACGCCGGTCGCAGGCGTGATG
ACGTCGACCTTCGGCCCGCGCAAGCATCCGATCCTCGGCACGGTTCGGATCCACAAAGGCGTCGACTGGGCGGCTCCGGT
CGGGACGCCGGTCATGGCCGCTTTCGACGGCGAGATTTCCTTCCAGGGCGATGGCGGCAGCTATGGCAATCTGGTGAAGA
TCACGCATGCCAACGGCCGCGAGACGCGCTACGCGCATATGCAGAAATTCGCCATCGCCAGCGGCATCGGTACCAAAGTG
AAGGCCGGCGACGTCATTGGCTATATCGGCACCACGGGGCTTTCGACCGGCCCGCATCTGCATTTCGAGCTCTACGAGAA
CGGCGAGGCGATCGACCCGCTCGGGACAGTCACCACAGTCGCCACCGCCGTTTCCGTCAGTTCCGGCGGGGCCGGCGATT
CCGCGGTCGAAACGCTGACCGACCGGATCGTCCATGTCGAAAGCGGCGGCAGCGCCCGCGCCAAGAACCCCAACTCGTCG
GCAACCGGCGCCGGCCAGTTCATCACCAAGACCTGGATCCGGATGATGAACACCTATCGTCCCGACCTTGCCCGATCGCT
TTCGACCGCCGACCTGCTCGCGCTTCGCTATGACGCGACGCTGTCGCGCGAAATGGTGCGCAACCTGGCGCGCGAAGGGG
AAGCCTATCTGCGCGCCCGCGGCCACCAGATCACGGCAGGGCGCCTTTATCTCTGCCACTTCCTTGGCATGGAAGGAGCG
CACCAGGTGCTGGCCGCGTCCGGCTCGTCGCAATTGAGCGCCGTTCTGGGCGCAGCCGTGATCCAGGCCAACCCGTTCCT
GACCGGCAAGACCGTCGGCTACGTCATCGATTGGGCCGAGCGGAAAATGGGGCAGAAAGCGCCGCGCGTGGTGACCGATC
AGAGCCAGCCGGTGACAACCACGACCGAGGTCCGGCAGACGTCGCCGGAGTTCGAGAAATACAAGCAGGCGATAACCGCA
CTGCTCAATTCAATCCAGGAGACGCTTGAGCCGGGCTGA

Upstream 100 bases:

>100_bases
TCGAGGAGTGCTGGCAGCGCGGTCATATCGCGGCGCGTTTCGTCGAGGTCGATACGCTGGAGCAGGTGCGCTGGACCTAT
TTCCTGACCGGAAACAGCCC

Downstream 100 bases:

>100_bases
GCAATTCCAGGAAAAGTGTGAACGGTTTTCCGGGGATAAGCGCGTAGCGCTTTCCCTTGGGAGTCGCGTCAAAACAAGAA
TTAGAACGGTGACCGTCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 812; Mature: 811

Protein sequence:

>812_residues
MTHSIDTSFKQKKLARLAERRRRLWRRALAGVATLTVIAIATGFYLTKDNWSFGDEDEELHPVEGMEDVPPDASVYVPAI
IDLAGDPMWITLAPDADTATKGHTVARPAELDSSGASPQIEILSDVMLSASEKFMTTIPSTQEDFAFFKAQRQTAAKPST
AAPDDQQPTSPAPAPAAPNDQPGDLANDLQAPPDAGEIPAGSAPKADADDPEAGWGETIDQGEAALPAFKKTAIENNTTV
ATVTSEYQRFAATEDTFVKILNDRSLDSVALDAHFSADDARLAGEALKGLFKRDGLEAGFVVAMRGFRPNRETTTMSLMQ
VSVYARNVYVGTLTRNAAGAFVSGVDPWVREDLFNYSGASDQGGPKRQYRLLDAIYSTAARNKVPTSVIGEAIMYLSRGQ
DLDAFASEDQRLVMIYSQTPRDQGEISGRVLYVGVLGKDKNLDCFVFQQSDGQYACVTGDDQVRSLNVTNGMVTPVAGVM
TSTFGPRKHPILGTVRIHKGVDWAAPVGTPVMAAFDGEISFQGDGGSYGNLVKITHANGRETRYAHMQKFAIASGIGTKV
KAGDVIGYIGTTGLSTGPHLHFELYENGEAIDPLGTVTTVATAVSVSSGGAGDSAVETLTDRIVHVESGGSARAKNPNSS
ATGAGQFITKTWIRMMNTYRPDLARSLSTADLLALRYDATLSREMVRNLAREGEAYLRARGHQITAGRLYLCHFLGMEGA
HQVLAASGSSQLSAVLGAAVIQANPFLTGKTVGYVIDWAERKMGQKAPRVVTDQSQPVTTTTEVRQTSPEFEKYKQAITA
LLNSIQETLEPG

Sequences:

>Translated_812_residues
MTHSIDTSFKQKKLARLAERRRRLWRRALAGVATLTVIAIATGFYLTKDNWSFGDEDEELHPVEGMEDVPPDASVYVPAI
IDLAGDPMWITLAPDADTATKGHTVARPAELDSSGASPQIEILSDVMLSASEKFMTTIPSTQEDFAFFKAQRQTAAKPST
AAPDDQQPTSPAPAPAAPNDQPGDLANDLQAPPDAGEIPAGSAPKADADDPEAGWGETIDQGEAALPAFKKTAIENNTTV
ATVTSEYQRFAATEDTFVKILNDRSLDSVALDAHFSADDARLAGEALKGLFKRDGLEAGFVVAMRGFRPNRETTTMSLMQ
VSVYARNVYVGTLTRNAAGAFVSGVDPWVREDLFNYSGASDQGGPKRQYRLLDAIYSTAARNKVPTSVIGEAIMYLSRGQ
DLDAFASEDQRLVMIYSQTPRDQGEISGRVLYVGVLGKDKNLDCFVFQQSDGQYACVTGDDQVRSLNVTNGMVTPVAGVM
TSTFGPRKHPILGTVRIHKGVDWAAPVGTPVMAAFDGEISFQGDGGSYGNLVKITHANGRETRYAHMQKFAIASGIGTKV
KAGDVIGYIGTTGLSTGPHLHFELYENGEAIDPLGTVTTVATAVSVSSGGAGDSAVETLTDRIVHVESGGSARAKNPNSS
ATGAGQFITKTWIRMMNTYRPDLARSLSTADLLALRYDATLSREMVRNLAREGEAYLRARGHQITAGRLYLCHFLGMEGA
HQVLAASGSSQLSAVLGAAVIQANPFLTGKTVGYVIDWAERKMGQKAPRVVTDQSQPVTTTTEVRQTSPEFEKYKQAITA
LLNSIQETLEPG
>Mature_811_residues
THSIDTSFKQKKLARLAERRRRLWRRALAGVATLTVIAIATGFYLTKDNWSFGDEDEELHPVEGMEDVPPDASVYVPAII
DLAGDPMWITLAPDADTATKGHTVARPAELDSSGASPQIEILSDVMLSASEKFMTTIPSTQEDFAFFKAQRQTAAKPSTA
APDDQQPTSPAPAPAAPNDQPGDLANDLQAPPDAGEIPAGSAPKADADDPEAGWGETIDQGEAALPAFKKTAIENNTTVA
TVTSEYQRFAATEDTFVKILNDRSLDSVALDAHFSADDARLAGEALKGLFKRDGLEAGFVVAMRGFRPNRETTTMSLMQV
SVYARNVYVGTLTRNAAGAFVSGVDPWVREDLFNYSGASDQGGPKRQYRLLDAIYSTAARNKVPTSVIGEAIMYLSRGQD
LDAFASEDQRLVMIYSQTPRDQGEISGRVLYVGVLGKDKNLDCFVFQQSDGQYACVTGDDQVRSLNVTNGMVTPVAGVMT
STFGPRKHPILGTVRIHKGVDWAAPVGTPVMAAFDGEISFQGDGGSYGNLVKITHANGRETRYAHMQKFAIASGIGTKVK
AGDVIGYIGTTGLSTGPHLHFELYENGEAIDPLGTVTTVATAVSVSSGGAGDSAVETLTDRIVHVESGGSARAKNPNSSA
TGAGQFITKTWIRMMNTYRPDLARSLSTADLLALRYDATLSREMVRNLAREGEAYLRARGHQITAGRLYLCHFLGMEGAH
QVLAASGSSQLSAVLGAAVIQANPFLTGKTVGYVIDWAERKMGQKAPRVVTDQSQPVTTTTEVRQTSPEFEKYKQAITAL
LNSIQETLEPG

Specific function: Could be involved in cell wall degradation or formation [H]

COG id: COG0739

COG function: function code M; Membrane proteins related to metalloendopeptidases

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI87081989, Length=226, Percent_Identity=31.858407079646, Blast_Score=106, Evalue=5e-24,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011055
- InterPro:   IPR013731
- InterPro:   IPR016047
- InterPro:   IPR002886
- InterPro:   IPR018392
- InterPro:   IPR002482 [H]

Pfam domain/function: PF01476 LysM; PF08525 OapA_N; PF01551 Peptidase_M23 [H]

EC number: 3.4.24.- [C]

Molecular weight: Translated: 87033; Mature: 86902

Theoretical pI: Translated: 5.20; Mature: 5.20

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTHSIDTSFKQKKLARLAERRRRLWRRALAGVATLTVIAIATGFYLTKDNWSFGDEDEEL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCC
HPVEGMEDVPPDASVYVPAIIDLAGDPMWITLAPDADTATKGHTVARPAELDSSGASPQI
CCCCCCCCCCCCCCEEEEEHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHH
EILSDVMLSASEKFMTTIPSTQEDFAFFKAQRQTAAKPSTAAPDDQQPTSPAPAPAAPND
HHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
QPGDLANDLQAPPDAGEIPAGSAPKADADDPEAGWGETIDQGEAALPAFKKTAIENNTTV
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCEE
ATVTSEYQRFAATEDTFVKILNDRSLDSVALDAHFSADDARLAGEALKGLFKRDGLEAGF
EEEHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCE
VVAMRGFRPNRETTTMSLMQVSVYARNVYVGTLTRNAAGAFVSGVDPWVREDLFNYSGAS
EEEEECCCCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCCHHCCCCHHHHHHHHCCCCCC
DQGGPKRQYRLLDAIYSTAARNKVPTSVIGEAIMYLSRGQDLDAFASEDQRLVMIYSQTP
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCC
RDQGEISGRVLYVGVLGKDKNLDCFVFQQSDGQYACVTGDDQVRSLNVTNGMVTPVAGVM
CCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCHHHHHHHH
TSTFGPRKHPILGTVRIHKGVDWAAPVGTPVMAAFDGEISFQGDGGSYGNLVKITHANGR
HHCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCEEEEECCCCCCCCEEEEEECCCC
ETRYAHMQKFAIASGIGTKVKAGDVIGYIGTTGLSTGPHLHFELYENGEAIDPLGTVTTV
CHHHHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHH
ATAVSVSSGGAGDSAVETLTDRIVHVESGGSARAKNPNSSATGAGQFITKTWIRMMNTYR
HHHHEECCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDLARSLSTADLLALRYDATLSREMVRNLAREGEAYLRARGHQITAGRLYLCHFLGMEGA
HHHHHHHCHHHHEEEECCHHHHHHHHHHHHHCCHHHHHHCCCEEECCHHHHHHHHCCCCH
HQVLAASGSSQLSAVLGAAVIQANPFLTGKTVGYVIDWAERKMGQKAPRVVTDQSQPVTT
HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCCCCCCCEECCCCCCCEE
TTEVRQTSPEFEKYKQAITALLNSIQETLEPG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
THSIDTSFKQKKLARLAERRRRLWRRALAGVATLTVIAIATGFYLTKDNWSFGDEDEEL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEECCCCCCCCCCCCC
HPVEGMEDVPPDASVYVPAIIDLAGDPMWITLAPDADTATKGHTVARPAELDSSGASPQI
CCCCCCCCCCCCCCEEEEEHEECCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHH
EILSDVMLSASEKFMTTIPSTQEDFAFFKAQRQTAAKPSTAAPDDQQPTSPAPAPAAPND
HHHHHHHHHCCHHHHCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
QPGDLANDLQAPPDAGEIPAGSAPKADADDPEAGWGETIDQGEAALPAFKKTAIENNTTV
CCCCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCHHHHHHCCCCCEE
ATVTSEYQRFAATEDTFVKILNDRSLDSVALDAHFSADDARLAGEALKGLFKRDGLEAGF
EEEHHHHHHHHCCHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCCCCE
VVAMRGFRPNRETTTMSLMQVSVYARNVYVGTLTRNAAGAFVSGVDPWVREDLFNYSGAS
EEEEECCCCCCCHHHHHHHHHEEEEEEEEEEEEECCCCCCHHCCCCHHHHHHHHCCCCCC
DQGGPKRQYRLLDAIYSTAARNKVPTSVIGEAIMYLSRGQDLDAFASEDQRLVMIYSQTP
CCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHHCCCCEEEEEEECCC
RDQGEISGRVLYVGVLGKDKNLDCFVFQQSDGQYACVTGDDQVRSLNVTNGMVTPVAGVM
CCCCCCCCEEEEEEEECCCCCCEEEEEECCCCCEEEEECCCCEEEEECCCCCHHHHHHHH
TSTFGPRKHPILGTVRIHKGVDWAAPVGTPVMAAFDGEISFQGDGGSYGNLVKITHANGR
HHCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCEEEEECCCCCCCCEEEEEECCCC
ETRYAHMQKFAIASGIGTKVKAGDVIGYIGTTGLSTGPHLHFELYENGEAIDPLGTVTTV
CHHHHHHHHHHHHHCCCCCEECCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHH
ATAVSVSSGGAGDSAVETLTDRIVHVESGGSARAKNPNSSATGAGQFITKTWIRMMNTYR
HHHHEECCCCCCHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDLARSLSTADLLALRYDATLSREMVRNLAREGEAYLRARGHQITAGRLYLCHFLGMEGA
HHHHHHHCHHHHEEEECCHHHHHHHHHHHHHCCHHHHHHCCCEEECCHHHHHHHHCCCCH
HQVLAASGSSQLSAVLGAAVIQANPFLTGKTVGYVIDWAERKMGQKAPRVVTDQSQPVTT
HHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHCCCCCCCEECCCCCCCEE
TTEVRQTSPEFEKYKQAITALLNSIQETLEPG
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 12471157 [H]