Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071

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The map label for this gene is phnM [H]

Identifier: 13472113

GI number: 13472113

Start: 1859918

End: 1861129

Strand: Direct

Name: phnM [H]

Synonym: mlr2305

Alternate gene names: 13472113

Gene position: 1859918-1861129 (Clockwise)

Preceding gene: 13472112

Following gene: 13472116

Centisome position: 26.43

GC content: 67.41

Gene sequence:

>1212_bases
ATGTGGCTGAGTGAATTCGAAATTGTCCTGCGCGACCGCGTCATCCCGAACGGCGCCGTCAGGATCGAAGACGGCCGGAT
CGCCGAAATCCGCGACAGGCCTGTCGCGCATGCCGACATCGACGGCGGCGGCCGCCTGCTGCTGCCCGGCTTCATCGACA
TGCATGGCGACATGGTGGAGAGGGAAGTCGAGCCGCGCATCGGCGTGCATGTGCCGATGCGGATCGGCATTGCCGAGCTC
GACAAGAAGCTCGCCTCCTGCGGCATCACCACCGCCTATGCCGCGCTCTCCTTCATCGGCGCCAGCGTCACCAGCGGCGT
GCTGCGCTCGGAAGACCATACGACAGAAATCATCGACACCATTGCCGGGATGAAGGACCATCTGTTGGTCGACCACCGCA
CCCACGCCCGCTTCGAAGTGACCTTCACCCCGGCGATTCCCACGCTGCAGAAGCTGATGGACGCCGGCAGGCTGGATTTG
ATCTCGCTGATGGACCACACGCCCGGACAGGGGCAGTACCGCGACGTCGAACTCTACATCGCCCGCATCGCCAAGGAGCG
CGGCATGTCCGTTGCCGCGGCCTCCGAGGTCGTCGGCAAGCGCATGGCCGGCCGCGAAGGACAAGGCAATGTGCTGAACG
CCCTGCAGGACCTGTCGGCGCGTGCCCGGGCCGCCGGCATCGTGCTCGCCTCGCATGACGACGACACGCTTGAAAAGGTC
GAGCTGGTCCATGGCCTGGGTGCCGCACTCAGCGAATTTCCGGTGACGCTGGAAGCGGCGCAGGAAGCCCGCAGGCTCGG
CATGCATACCGCCATGGGCGCGCCCAACGCGCTGCGCGGCGAGTCCTATTCCGGCAATCTTTCCGCCCGGCAGGCCTATC
AAGCCGGGCTGCTCGACATGCTGGCAAGCGACTACCATCCGGCCTCCATCCTGCCAGCCGTGCTCGGCCTGGCGGAGCTG
CGGGGCGATGGCCTCGCGGCGGCGGCGGCGCTGACAAGCGCCAACCCGGCCAACGCCTTGGGGCTCACCGATCGCGGGGC
CGTCGAGCCCGGCCTTCTGGCCGATTTCGTGGTGGCCGACCGCTATCCCGTGCCACGCGTCCGCGCCACCTTCCGCGCCG
GCCGCATGATCTACGGTGATGGCACGCTTGCACTAGCGGGCAAGGCAGAACGCCTTGGTCCCGTGGCGGCTGAACGGCTA
CCGGCTGCCTAG

Upstream 100 bases:

>100_bases
ATCATCGCCATGATCGGCGTCTTCCATCGCCCCAACGATGTCGCCGACCTTGTCGCCCGCGAAATCCACCTTGAAATCGC
TGCCTTGCAAGAGACATGAC

Downstream 100 bases:

>100_bases
AGCAGTCCCGGGAAAGGTGTGGAACTGCTTTCCTGCAGGAATCGCGTCAAAACAAAGAGTCAGAGCGGTTCACCGTTTCC
GTCAAACGGTGAACCGCTCT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 403; Mature: 403

Protein sequence:

>403_residues
MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVEREVEPRIGVHVPMRIGIAEL
DKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDTIAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDL
ISLMDHTPGQGQYRDVELYIARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV
ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDMLASDYHPASILPAVLGLAEL
RGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVADRYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERL
PAA

Sequences:

>Translated_403_residues
MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVEREVEPRIGVHVPMRIGIAEL
DKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDTIAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDL
ISLMDHTPGQGQYRDVELYIARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV
ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDMLASDYHPASILPAVLGLAEL
RGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVADRYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERL
PAA
>Mature_403_residues
MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVEREVEPRIGVHVPMRIGIAEL
DKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDTIAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDL
ISLMDHTPGQGQYRDVELYIARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV
ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDMLASDYHPASILPAVLGLAEL
RGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVADRYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERL
PAA

Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]

COG id: COG3454

COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1790533, Length=389, Percent_Identity=34.7043701799486, Blast_Score=196, Evalue=2e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059
- InterPro:   IPR012696 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 42861; Mature: 42861

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVE
CCHHHHHHHHHHCCCCCCCEEECCCCEEECCCCCCEEEECCCCCEEEECCHHHCCCHHHH
REVEPRIGVHVPMRIGIAELDKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDT
HHCCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDLISLMDHTPGQGQYRDVELYI
HHCCHHHEEEECCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHH
ARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH
ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LASDYHPASILPAVLGLAELRGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVAD
HHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC
RYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERLPAA
CCCCCHHHHHHHCCEEEEECCEEEECCCHHHHCCHHHHHCCCC
>Mature Secondary Structure
MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVE
CCHHHHHHHHHHCCCCCCCEEECCCCEEECCCCCCEEEECCCCCEEEECCHHHCCCHHHH
REVEPRIGVHVPMRIGIAELDKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDT
HHCCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
IAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDLISLMDHTPGQGQYRDVELYI
HHCCHHHEEEECCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHH
ARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV
HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH
ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDM
HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
LASDYHPASILPAVLGLAELRGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVAD
HHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC
RYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERLPAA
CCCCCHHHHHHHCCEEEEECCEEEECCCHHHHCCHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 2155230; 1840580; 7610040; 9278503 [H]