| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is phnM [H]
Identifier: 13472113
GI number: 13472113
Start: 1859918
End: 1861129
Strand: Direct
Name: phnM [H]
Synonym: mlr2305
Alternate gene names: 13472113
Gene position: 1859918-1861129 (Clockwise)
Preceding gene: 13472112
Following gene: 13472116
Centisome position: 26.43
GC content: 67.41
Gene sequence:
>1212_bases ATGTGGCTGAGTGAATTCGAAATTGTCCTGCGCGACCGCGTCATCCCGAACGGCGCCGTCAGGATCGAAGACGGCCGGAT CGCCGAAATCCGCGACAGGCCTGTCGCGCATGCCGACATCGACGGCGGCGGCCGCCTGCTGCTGCCCGGCTTCATCGACA TGCATGGCGACATGGTGGAGAGGGAAGTCGAGCCGCGCATCGGCGTGCATGTGCCGATGCGGATCGGCATTGCCGAGCTC GACAAGAAGCTCGCCTCCTGCGGCATCACCACCGCCTATGCCGCGCTCTCCTTCATCGGCGCCAGCGTCACCAGCGGCGT GCTGCGCTCGGAAGACCATACGACAGAAATCATCGACACCATTGCCGGGATGAAGGACCATCTGTTGGTCGACCACCGCA CCCACGCCCGCTTCGAAGTGACCTTCACCCCGGCGATTCCCACGCTGCAGAAGCTGATGGACGCCGGCAGGCTGGATTTG ATCTCGCTGATGGACCACACGCCCGGACAGGGGCAGTACCGCGACGTCGAACTCTACATCGCCCGCATCGCCAAGGAGCG CGGCATGTCCGTTGCCGCGGCCTCCGAGGTCGTCGGCAAGCGCATGGCCGGCCGCGAAGGACAAGGCAATGTGCTGAACG CCCTGCAGGACCTGTCGGCGCGTGCCCGGGCCGCCGGCATCGTGCTCGCCTCGCATGACGACGACACGCTTGAAAAGGTC GAGCTGGTCCATGGCCTGGGTGCCGCACTCAGCGAATTTCCGGTGACGCTGGAAGCGGCGCAGGAAGCCCGCAGGCTCGG CATGCATACCGCCATGGGCGCGCCCAACGCGCTGCGCGGCGAGTCCTATTCCGGCAATCTTTCCGCCCGGCAGGCCTATC AAGCCGGGCTGCTCGACATGCTGGCAAGCGACTACCATCCGGCCTCCATCCTGCCAGCCGTGCTCGGCCTGGCGGAGCTG CGGGGCGATGGCCTCGCGGCGGCGGCGGCGCTGACAAGCGCCAACCCGGCCAACGCCTTGGGGCTCACCGATCGCGGGGC CGTCGAGCCCGGCCTTCTGGCCGATTTCGTGGTGGCCGACCGCTATCCCGTGCCACGCGTCCGCGCCACCTTCCGCGCCG GCCGCATGATCTACGGTGATGGCACGCTTGCACTAGCGGGCAAGGCAGAACGCCTTGGTCCCGTGGCGGCTGAACGGCTA CCGGCTGCCTAG
Upstream 100 bases:
>100_bases ATCATCGCCATGATCGGCGTCTTCCATCGCCCCAACGATGTCGCCGACCTTGTCGCCCGCGAAATCCACCTTGAAATCGC TGCCTTGCAAGAGACATGAC
Downstream 100 bases:
>100_bases AGCAGTCCCGGGAAAGGTGTGGAACTGCTTTCCTGCAGGAATCGCGTCAAAACAAAGAGTCAGAGCGGTTCACCGTTTCC GTCAAACGGTGAACCGCTCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 403; Mature: 403
Protein sequence:
>403_residues MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVEREVEPRIGVHVPMRIGIAEL DKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDTIAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDL ISLMDHTPGQGQYRDVELYIARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDMLASDYHPASILPAVLGLAEL RGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVADRYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERL PAA
Sequences:
>Translated_403_residues MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVEREVEPRIGVHVPMRIGIAEL DKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDTIAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDL ISLMDHTPGQGQYRDVELYIARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDMLASDYHPASILPAVLGLAEL RGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVADRYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERL PAA >Mature_403_residues MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVEREVEPRIGVHVPMRIGIAEL DKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDTIAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDL ISLMDHTPGQGQYRDVELYIARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDMLASDYHPASILPAVLGLAEL RGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVADRYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERL PAA
Specific function: Belongs to an operon involved in alkylphosphonate uptake and C-P lyase. Exact function not known [H]
COG id: COG3454
COG function: function code P; Metal-dependent hydrolase involved in phosphonate metabolism
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1790533, Length=389, Percent_Identity=34.7043701799486, Blast_Score=196, Evalue=2e-51,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013108 - InterPro: IPR011059 - InterPro: IPR012696 [H]
Pfam domain/function: PF07969 Amidohydro_3 [H]
EC number: NA
Molecular weight: Translated: 42861; Mature: 42861
Theoretical pI: Translated: 5.94; Mature: 5.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVE CCHHHHHHHHHHCCCCCCCEEECCCCEEECCCCCCEEEECCCCCEEEECCHHHCCCHHHH REVEPRIGVHVPMRIGIAELDKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDT HHCCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDLISLMDHTPGQGQYRDVELYI HHCCHHHEEEECCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHH ARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDM HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LASDYHPASILPAVLGLAELRGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVAD HHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC RYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERLPAA CCCCCHHHHHHHCCEEEEECCEEEECCCHHHHCCHHHHHCCCC >Mature Secondary Structure MWLSEFEIVLRDRVIPNGAVRIEDGRIAEIRDRPVAHADIDGGGRLLLPGFIDMHGDMVE CCHHHHHHHHHHCCCCCCCEEECCCCEEECCCCCCEEEECCCCCEEEECCHHHCCCHHHH REVEPRIGVHVPMRIGIAELDKKLASCGITTAYAALSFIGASVTSGVLRSEDHTTEIIDT HHCCCCCCEECCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH IAGMKDHLLVDHRTHARFEVTFTPAIPTLQKLMDAGRLDLISLMDHTPGQGQYRDVELYI HHCCHHHEEEECCCCCEEEEEECCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCHHHHHH ARIAKERGMSVAAASEVVGKRMAGREGQGNVLNALQDLSARARAAGIVLASHDDDTLEKV HHHHHHHCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHEEEEECCCCHHHHHH ELVHGLGAALSEFPVTLEAAQEARRLGMHTAMGAPNALRGESYSGNLSARQAYQAGLLDM HHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHH LASDYHPASILPAVLGLAELRGDGLAAAAALTSANPANALGLTDRGAVEPGLLADFVVAD HHCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHC RYPVPRVRATFRAGRMIYGDGTLALAGKAERLGPVAAERLPAA CCCCCHHHHHHHCCEEEEECCEEEECCCHHHHCCHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2155230; 1840580; 7610040; 9278503 [H]