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The map label for this gene is ydeR [H]

Identifier: 13472082

GI number: 13472082

Start: 1820081

End: 1821304

Strand: Direct

Name: ydeR [H]

Synonym: mlr2264

Alternate gene names: 13472082

Gene position: 1820081-1821304 (Clockwise)

Preceding gene: 13472080

Following gene: 13472085

Centisome position: 25.87

GC content: 70.75

Gene sequence:

>1224_bases
ATGACTGATACCAATGACGGCCAGCTGTGCGAGCGGCTGCCGGCTGCGACCATCACCGGCCCGCAGACGCTGCTCTTCGC
CGCCTCCACCGGCATCATCGTCACCAATCTGTTCGCGCCGCAGACGCTGGTCGGGCTGATCGGCCCGTCGCTCGGCGCCA
GCGCCGCCAGCGTCGGCCTCGTCGCCATGGCCACGCTGCTCGGCTATGCCGCCGGCCTGTTCTTCCTGGTGCCGATGGCA
GACCTTGCCGAAAACCGCGCCCTGATCCTGCGCATGCTGGCCGCGGCCGCCCTTGCGGCCGGCGTCGCCGCCTTCGCGCC
CACCATCGCCTCGCTGCTGGTCGTCCTGTTCGTCCTCGGCGCTGCCTGCTCGGCGATTCAGATCCTGGTGCCGATCGCCG
CCTCGATGGCGCCGCCCGGCGAAGCCGGCCGCGTCATCGGCGATGTGATGAGCGGGGTGATGATCGGCATCCTGCTGGCG
CGGCCGCTGGCCAGCCTGATCGCCGACGCCTGGGGCTGGCGCGCCTTCTACGGCCTCAGCGCCGCCGCGCTCGTCCTGCT
CGCCGGCGTGCTTGCCTTCACCTTGCCGCAGCGCCGCCCAGAGGCGAAATCGACTTATGGCGCGCTGATCGCGTCGCTGT
TCGGGCTGCTGCGCGACGAACCGGTGCTACGGCGCCGTGCGCTGACGGCAGCGCTGGTGATGGCGGCCTTCAGCCTGTTC
TGGACGGCGGTCGCTTTGCGCCTCGCTGAGCCGCCCTTCGGCCTTGGCCAGCGCGGCATTGCGCTCTTCGCGCTCGTCGG
CGCCGGCGGCGCCGTGGTCACGCCGCTGTTCGGCCGGGCCGGCGACCATGGCTGGACGCGATCCGCCACTATCGTCTGTC
ACCTCGTGCTGATCGGCGCGATGGCGCTCGCCGCCTGGGTCGGCGCCTCTCAGTCCGAAGCGTCATGGCTGCCGCTGGTG
CTGATGGGCATTAGCGCCGTGCTGCTCGACATCGGCGTCACCGGCGACCAGACGCTTGGCCGCCGTGCCGTCAATCTGCT
TCAGCCCATGGCGCGCGGCCGGCTCAACGGCCTGTTCGTCGGCATCTTCTTCATCGGCGGCGCCATCGGCTCCTTGCTGG
CCGGTGTCGCCTGGAGCTGGGGCGGATGGACTTGCGTGTGCGCCATCGGCGCAGCCTTTGGGCTCGTCGCACTTCTGGTC
GACTGGATCGGCGGGCCGGAATGA

Upstream 100 bases:

>100_bases
CATGCGCATCTCGCATAGTGATTATCGAATTGATTGAATTGTAGCATGATAATGCTTCGGCATAAAGTCCTCAAGCAATA
TGCAACTTCCTGAGGACTCC

Downstream 100 bases:

>100_bases
CGCCAGCCGGCTCAGGGGAAGACGTTCACCCTCTTGACGCTCACCTCCGCCGATCCGAGGTTGTTGTGCCTATAGAAAAA
GTTGGAGACGCCAGGCAGGG

Product: antibiotic resistance protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 406

Protein sequence:

>407_residues
MTDTNDGQLCERLPAATITGPQTLLFAASTGIIVTNLFAPQTLVGLIGPSLGASAASVGLVAMATLLGYAAGLFFLVPMA
DLAENRALILRMLAAAALAAGVAAFAPTIASLLVVLFVLGAACSAIQILVPIAASMAPPGEAGRVIGDVMSGVMIGILLA
RPLASLIADAWGWRAFYGLSAAALVLLAGVLAFTLPQRRPEAKSTYGALIASLFGLLRDEPVLRRRALTAALVMAAFSLF
WTAVALRLAEPPFGLGQRGIALFALVGAGGAVVTPLFGRAGDHGWTRSATIVCHLVLIGAMALAAWVGASQSEASWLPLV
LMGISAVLLDIGVTGDQTLGRRAVNLLQPMARGRLNGLFVGIFFIGGAIGSLLAGVAWSWGGWTCVCAIGAAFGLVALLV
DWIGGPE

Sequences:

>Translated_407_residues
MTDTNDGQLCERLPAATITGPQTLLFAASTGIIVTNLFAPQTLVGLIGPSLGASAASVGLVAMATLLGYAAGLFFLVPMA
DLAENRALILRMLAAAALAAGVAAFAPTIASLLVVLFVLGAACSAIQILVPIAASMAPPGEAGRVIGDVMSGVMIGILLA
RPLASLIADAWGWRAFYGLSAAALVLLAGVLAFTLPQRRPEAKSTYGALIASLFGLLRDEPVLRRRALTAALVMAAFSLF
WTAVALRLAEPPFGLGQRGIALFALVGAGGAVVTPLFGRAGDHGWTRSATIVCHLVLIGAMALAAWVGASQSEASWLPLV
LMGISAVLLDIGVTGDQTLGRRAVNLLQPMARGRLNGLFVGIFFIGGAIGSLLAGVAWSWGGWTCVCAIGAAFGLVALLV
DWIGGPE
>Mature_406_residues
TDTNDGQLCERLPAATITGPQTLLFAASTGIIVTNLFAPQTLVGLIGPSLGASAASVGLVAMATLLGYAAGLFFLVPMAD
LAENRALILRMLAAAALAAGVAAFAPTIASLLVVLFVLGAACSAIQILVPIAASMAPPGEAGRVIGDVMSGVMIGILLAR
PLASLIADAWGWRAFYGLSAAALVLLAGVLAFTLPQRRPEAKSTYGALIASLFGLLRDEPVLRRRALTAALVMAAFSLFW
TAVALRLAEPPFGLGQRGIALFALVGAGGAVVTPLFGRAGDHGWTRSATIVCHLVLIGAMALAAWVGASQSEASWLPLVL
MGISAVLLDIGVTGDQTLGRRAVNLLQPMARGRLNGLFVGIFFIGGAIGSLLAGVAWSWGGWTCVCAIGAAFGLVALLVD
WIGGPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 41490; Mature: 41359

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDTNDGQLCERLPAATITGPQTLLFAASTGIIVTNLFAPQTLVGLIGPSLGASAASVGL
CCCCCCCHHHHHCCCCCCCCCHHEEEEECCCHHEEEHHHHHHHHHHHCCCCCCHHHHHHH
VAMATLLGYAAGLFFLVPMADLAENRALILRMLAAAALAAGVAAFAPTIASLLVVLFVLG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AACSAIQILVPIAASMAPPGEAGRVIGDVMSGVMIGILLARPLASLIADAWGWRAFYGLS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAALVLLAGVLAFTLPQRRPEAKSTYGALIASLFGLLRDEPVLRRRALTAALVMAAFSLF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
WTAVALRLAEPPFGLGQRGIALFALVGAGGAVVTPLFGRAGDHGWTRSATIVCHLVLIGA
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
MALAAWVGASQSEASWLPLVLMGISAVLLDIGVTGDQTLGRRAVNLLQPMARGRLNGLFV
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
GIFFIGGAIGSLLAGVAWSWGGWTCVCAIGAAFGLVALLVDWIGGPE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TDTNDGQLCERLPAATITGPQTLLFAASTGIIVTNLFAPQTLVGLIGPSLGASAASVGL
CCCCCCHHHHHCCCCCCCCCHHEEEEECCCHHEEEHHHHHHHHHHHCCCCCCHHHHHHH
VAMATLLGYAAGLFFLVPMADLAENRALILRMLAAAALAAGVAAFAPTIASLLVVLFVLG
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AACSAIQILVPIAASMAPPGEAGRVIGDVMSGVMIGILLARPLASLIADAWGWRAFYGLS
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AAALVLLAGVLAFTLPQRRPEAKSTYGALIASLFGLLRDEPVLRRRALTAALVMAAFSLF
HHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
WTAVALRLAEPPFGLGQRGIALFALVGAGGAVVTPLFGRAGDHGWTRSATIVCHLVLIGA
HHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
MALAAWVGASQSEASWLPLVLMGISAVLLDIGVTGDQTLGRRAVNLLQPMARGRLNGLFV
HHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCHHHHHH
GIFFIGGAIGSLLAGVAWSWGGWTCVCAIGAAFGLVALLVDWIGGPE
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]