| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472070
Identifier: 13472070
GI number: 13472070
Start: 1809143
End: 1811131
Strand: Direct
Name: 13472070
Synonym: mlr2247
Alternate gene names: NA
Gene position: 1809143-1811131 (Clockwise)
Preceding gene: 13472069
Following gene: 13472080
Centisome position: 25.71
GC content: 66.01
Gene sequence:
>1989_bases ATGACCGCATCGCCATCCCCCCGCCCCACCACGAAGGGCAAGCCGAAACTCGCCTTCCGGCCGCTGCCGGTGCCGCAGGT CGATGTGCACGGCTTCTGGGGCGACCGCGCCGACGCGGTGGCCACCCGCACCGCCGACATCCTCTACGAACGCTGCGTCG AGGCGCGCATGCTGGAGCAGATCGATCCGGACCGCCCCTCGCCCGGCATCGTCATCCCCTTCCATTCACCCTCGCCCGAT GAAGCGGACCGCCAAGGCGCCGAATTCACCGGCTCGACGGTGACGACGCAGATGTTCTGGGATTCCGATCTCGGCAAGAC GATCGAGACCGCGGCCTATTCGCTCTACCGGCGCAAGAACCCGCAACTGGAGAAGAAGATCGACGCCGTCATCGACATGT ACGGCAAGCTGCAGCAGGAGGACGGCTATCTCTCCAGCTGGTACCAGCGCATCCAGCCCGGCAAGCGCTGGACAAACCTG CGCGACTGCCACGAGCTCTATTGCGCCGGGCACCTGATCGAGGGCGCGGTCGCCTATTACCAGGCGACGGGCAAGCGCAA GCTGCTCGACATTATGTGCCGCTATGCCGACCACATCGCCTCGGTGCTGGGGCCTGAACCCGACAAGAAGAAAGGCTATT GCGGCCACGAGGAGATCGAACTGGCGCTGGTCAAGCTGGCGCGGGTGACCGGCGAGCAGAAATATATGGATCTGGCGAAG TACTTCATCGACCAGCGCGGCCAACAGCCGCATTATTTCGACGAGGAGGCGCGCGCCCGTGGCGCCGACCCAAGAGCCTA TCATTTCAAGACCTATGAATACAGCCAGTCGCACAGACCGGTGCGCGAGCAGGACAAGGTCGTCGGCCATGCGGTGCGGG CGATGTACCTCTACTCGGGCATGGCCGACATCGCCACCGAATATGGCGACGACAGCCTGCGCGTCGCCCTCGACCGGCTG TGGGACGACCTCACCACGAAGAACCTGTACATCACCGGCGGGCTTGGGCCGTCGGCGCACAATGAGGGTTTCACCAGCGA CTACGACCTGCCCAACGAGAGCGCCTATGCCGAGACCTGCGCCGCCGTCGGCCTGGTGTTCTGGGCGAGCCGCATGCTCG GCATGGGGCCGAACGCCCGCTACGCCGACATGATGGAGCGCGCGCTCTACAATGGCTCGATCTCCGGCCTGTCGCTCGAC GGCTCGCTGTTCTTCTACGAGAACCCGCTGGAAAGCCGGGGCCGGCACAACAGGTGGAAATGGCACCGCTGCCCTTGCTG TCCGCCCAATGTCGGGCGCATGGTCGCCTCGATCGGCAGCTATTTCTACAGCCTGGCGGATGATGCACTGGCCGTTCACC TCTACGGCGATTCCACCGCCCGCTTCGACATTGCGAGCACGCCGGTGCAGCTCACGCAAGCAAGCCGCTATCCCTGGGAC GGCGCCGTGGAGATCACGGTCGAGCCGCAGGCGCCGGTCGAGTTCACGCTGCATCTACGCATCCCGGCATGGAGCAGCAG TGCGACGCTTGAGATCAATGGCGAGGCGGTCGACCTCGAAGACATGACCAGCGACGGTTATGCCGCGATCCGGCGCAGCT GGCAGAAGGGCGACCGCGTCCGGCTCGACCTCGAAATGCCGATCGAGCGGCTCTACGCCAATCCCGAGGTCCGGCAGGAT GCCGGCCGCGTCGCGCTGTCGCGCGGGCCGCTGATCTACTGCGTCGAGGCATCGGACAATGACGGCCGGCTGCATCGCCT GACCCTGCCGCGCACGGCAAGCATAGACGCGCATGAAGCGCCCGAACTGCTGGGCGGCGTGGTGACGCTTTCAGCGAAGG CGCGGGCCGATGCAGGCGACGGCTGGCAGGACGGACTCTACCGGCGCGAGCCGCCGGCCAGCGTCGAGACGCGCCTGACC GCCATCCCCTATTACGCCTGGGACAACCGCGAGCCCGGCGAGATGCTGGTGTGGCTGCGGGACGGCTGA
Upstream 100 bases:
>100_bases GATGATGGTGCCGTGCCTGATCCTGTTCCTTGCTTTGCAGCGCTTCTACATCCGCGGCCTGATGGCCGGGGCCGTCAAAT AGACAGAACGGAGTGAGTTC
Downstream 100 bases:
>100_bases GGCCTCCCGCTGCTCGACTATGTCCGGCTTGATTGGGCGGCGGCGGGCAGCGCCACGCTCTGTGCCGCTTGCGGCGCGCT GTTGTCGATATGCGCCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 662; Mature: 661
Protein sequence:
>662_residues MTASPSPRPTTKGKPKLAFRPLPVPQVDVHGFWGDRADAVATRTADILYERCVEARMLEQIDPDRPSPGIVIPFHSPSPD EADRQGAEFTGSTVTTQMFWDSDLGKTIETAAYSLYRRKNPQLEKKIDAVIDMYGKLQQEDGYLSSWYQRIQPGKRWTNL RDCHELYCAGHLIEGAVAYYQATGKRKLLDIMCRYADHIASVLGPEPDKKKGYCGHEEIELALVKLARVTGEQKYMDLAK YFIDQRGQQPHYFDEEARARGADPRAYHFKTYEYSQSHRPVREQDKVVGHAVRAMYLYSGMADIATEYGDDSLRVALDRL WDDLTTKNLYITGGLGPSAHNEGFTSDYDLPNESAYAETCAAVGLVFWASRMLGMGPNARYADMMERALYNGSISGLSLD GSLFFYENPLESRGRHNRWKWHRCPCCPPNVGRMVASIGSYFYSLADDALAVHLYGDSTARFDIASTPVQLTQASRYPWD GAVEITVEPQAPVEFTLHLRIPAWSSSATLEINGEAVDLEDMTSDGYAAIRRSWQKGDRVRLDLEMPIERLYANPEVRQD AGRVALSRGPLIYCVEASDNDGRLHRLTLPRTASIDAHEAPELLGGVVTLSAKARADAGDGWQDGLYRREPPASVETRLT AIPYYAWDNREPGEMLVWLRDG
Sequences:
>Translated_662_residues MTASPSPRPTTKGKPKLAFRPLPVPQVDVHGFWGDRADAVATRTADILYERCVEARMLEQIDPDRPSPGIVIPFHSPSPD EADRQGAEFTGSTVTTQMFWDSDLGKTIETAAYSLYRRKNPQLEKKIDAVIDMYGKLQQEDGYLSSWYQRIQPGKRWTNL RDCHELYCAGHLIEGAVAYYQATGKRKLLDIMCRYADHIASVLGPEPDKKKGYCGHEEIELALVKLARVTGEQKYMDLAK YFIDQRGQQPHYFDEEARARGADPRAYHFKTYEYSQSHRPVREQDKVVGHAVRAMYLYSGMADIATEYGDDSLRVALDRL WDDLTTKNLYITGGLGPSAHNEGFTSDYDLPNESAYAETCAAVGLVFWASRMLGMGPNARYADMMERALYNGSISGLSLD GSLFFYENPLESRGRHNRWKWHRCPCCPPNVGRMVASIGSYFYSLADDALAVHLYGDSTARFDIASTPVQLTQASRYPWD GAVEITVEPQAPVEFTLHLRIPAWSSSATLEINGEAVDLEDMTSDGYAAIRRSWQKGDRVRLDLEMPIERLYANPEVRQD AGRVALSRGPLIYCVEASDNDGRLHRLTLPRTASIDAHEAPELLGGVVTLSAKARADAGDGWQDGLYRREPPASVETRLT AIPYYAWDNREPGEMLVWLRDG >Mature_661_residues TASPSPRPTTKGKPKLAFRPLPVPQVDVHGFWGDRADAVATRTADILYERCVEARMLEQIDPDRPSPGIVIPFHSPSPDE ADRQGAEFTGSTVTTQMFWDSDLGKTIETAAYSLYRRKNPQLEKKIDAVIDMYGKLQQEDGYLSSWYQRIQPGKRWTNLR DCHELYCAGHLIEGAVAYYQATGKRKLLDIMCRYADHIASVLGPEPDKKKGYCGHEEIELALVKLARVTGEQKYMDLAKY FIDQRGQQPHYFDEEARARGADPRAYHFKTYEYSQSHRPVREQDKVVGHAVRAMYLYSGMADIATEYGDDSLRVALDRLW DDLTTKNLYITGGLGPSAHNEGFTSDYDLPNESAYAETCAAVGLVFWASRMLGMGPNARYADMMERALYNGSISGLSLDG SLFFYENPLESRGRHNRWKWHRCPCCPPNVGRMVASIGSYFYSLADDALAVHLYGDSTARFDIASTPVQLTQASRYPWDG AVEITVEPQAPVEFTLHLRIPAWSSSATLEINGEAVDLEDMTSDGYAAIRRSWQKGDRVRLDLEMPIERLYANPEVRQDA GRVALSRGPLIYCVEASDNDGRLHRLTLPRTASIDAHEAPELLGGVVTLSAKARADAGDGWQDGLYRREPPASVETRLTA IPYYAWDNREPGEMLVWLRDG
Specific function: Unknown
COG id: COG3533
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74382; Mature: 74251
Theoretical pI: Translated: 5.64; Mature: 5.64
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTASPSPRPTTKGKPKLAFRPLPVPQVDVHGFWGDRADAVATRTADILYERCVEARMLEQ CCCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IDPDRPSPGIVIPFHSPSPDEADRQGAEFTGSTVTTQMFWDSDLGKTIETAAYSLYRRKN CCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC PQLEKKIDAVIDMYGKLQQEDGYLSSWYQRIQPGKRWTNLRDCHELYCAGHLIEGAVAYY CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QATGKRKLLDIMCRYADHIASVLGPEPDKKKGYCGHEEIELALVKLARVTGEQKYMDLAK HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH YFIDQRGQQPHYFDEEARARGADPRAYHFKTYEYSQSHRPVREQDKVVGHAVRAMYLYSG HHHHCCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC MADIATEYGDDSLRVALDRLWDDLTTKNLYITGGLGPSAHNEGFTSDYDLPNESAYAETC HHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH AAVGLVFWASRMLGMGPNARYADMMERALYNGSISGLSLDGSLFFYENPLESRGRHNRWK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCEEEEECCCHHHCCCCCCCC WHRCPCCPPNVGRMVASIGSYFYSLADDALAVHLYGDSTARFDIASTPVQLTQASRYPWD CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCHHHHHCCCCCCC GAVEITVEPQAPVEFTLHLRIPAWSSSATLEINGEAVDLEDMTSDGYAAIRRSWQKGDRV CEEEEEECCCCCEEEEEEEEEECCCCCEEEEECCCEEEHHHCCCCHHHHHHHHHCCCCEE RLDLEMPIERLYANPEVRQDAGRVALSRGPLIYCVEASDNDGRLHRLTLPRTASIDAHEA EEECCCCHHHHHCCCHHHHCCCCEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCC PELLGGVVTLSAKARADAGDGWQDGLYRREPPASVETRLTAIPYYAWDNREPGEMLVWLR HHHHCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCEEEEEE DG CC >Mature Secondary Structure TASPSPRPTTKGKPKLAFRPLPVPQVDVHGFWGDRADAVATRTADILYERCVEARMLEQ CCCCCCCCCCCCCCCEEEECCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH IDPDRPSPGIVIPFHSPSPDEADRQGAEFTGSTVTTQMFWDSDLGKTIETAAYSLYRRKN CCCCCCCCCEEEECCCCCCCHHHHCCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHCCC PQLEKKIDAVIDMYGKLQQEDGYLSSWYQRIQPGKRWTNLRDCHELYCAGHLIEGAVAYY CCHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH QATGKRKLLDIMCRYADHIASVLGPEPDKKKGYCGHEEIELALVKLARVTGEQKYMDLAK HHCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHH YFIDQRGQQPHYFDEEARARGADPRAYHFKTYEYSQSHRPVREQDKVVGHAVRAMYLYSG HHHHCCCCCCCCCCHHHHHCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHC MADIATEYGDDSLRVALDRLWDDLTTKNLYITGGLGPSAHNEGFTSDYDLPNESAYAETC HHHHHHHCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHH AAVGLVFWASRMLGMGPNARYADMMERALYNGSISGLSLDGSLFFYENPLESRGRHNRWK HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCCEEECCEEEEECCCHHHCCCCCCCC WHRCPCCPPNVGRMVASIGSYFYSLADDALAVHLYGDSTARFDIASTPVQLTQASRYPWD CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCEEEECCCCHHHHHCCCCCCC GAVEITVEPQAPVEFTLHLRIPAWSSSATLEINGEAVDLEDMTSDGYAAIRRSWQKGDRV CEEEEEECCCCCEEEEEEEEEECCCCCEEEEECCCEEEHHHCCCCHHHHHHHHHCCCCEE RLDLEMPIERLYANPEVRQDAGRVALSRGPLIYCVEASDNDGRLHRLTLPRTASIDAHEA EEECCCCHHHHHCCCHHHHCCCCEEEECCCEEEEEECCCCCCCEEEEECCCCCCCCCCCC PELLGGVVTLSAKARADAGDGWQDGLYRREPPASVETRLTAIPYYAWDNREPGEMLVWLR HHHHCCEEEEEECCCCCCCCCHHCCCCCCCCCCCHHHEEEEEEEEECCCCCCCCEEEEEE DG CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA