| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13472020
Identifier: 13472020
GI number: 13472020
Start: 1767221
End: 1767673
Strand: Direct
Name: 13472020
Synonym: mlr2180
Alternate gene names: NA
Gene position: 1767221-1767673 (Clockwise)
Preceding gene: 13472018
Following gene: 13472021
Centisome position: 25.12
GC content: 58.28
Gene sequence:
>453_bases ATGACTTTCAAGCATTGTCTGCTGGCCGTCGTTTTCACGTCACTCTGCATGGGATCTGCTCAGGCCCAGTCTGCGAAAGA AGCCATCGAAGCCGCTAATGCCGACTTCGTGAAGGCGTACAACAGCAAGGATGCGGCCGGGGTTGCCTCGAAATACATGG ATGATGCGGCCGCATTCCCACCGGACATGGCGCGGGTCGACGGCCGCCAGAATATCCAGAAGCTGTGGCAGGGCGCGATG GATATGGGCATATCGGAGCTCAAGCTCACGACGCTTGATGTCCAGGAAAGCGGAGATTTTGCGTTCGAGTCCGGGAGTTT CTCCCTCAAGGCGCCGGGCAAGGATTCGAAGCTGGTGGATGCCGCCGGGAAGTATGTCGTGGTCTGGAGGAAGGGTCAGG ACGGAGGCTGGAAGCTCTACCGGGATATATGGAACTCCGACCCCGCGAAATGA
Upstream 100 bases:
>100_bases AGACTGGAACCGCGATTGGTATGCGGCTCGCGACCATTCCGGCGATCGCTCGCCGCCGTGGAGAAACTGGTAACCAGAAA CCGGAACACGGGAGGATGAA
Downstream 100 bases:
>100_bases CTCCGCATGCAGCCATCCCCGCCTGCGGATGGTGCTCGCAAGCGACTGATCTGGCTGTAGGCCTGAACGCGGGGAATAAT GGCGATAAGGGTGATCGGTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTFKHCLLAVVFTSLCMGSAQAQSAKEAIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAM DMGISELKLTTLDVQESGDFAFESGSFSLKAPGKDSKLVDAAGKYVVVWRKGQDGGWKLYRDIWNSDPAK
Sequences:
>Translated_150_residues MTFKHCLLAVVFTSLCMGSAQAQSAKEAIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAM DMGISELKLTTLDVQESGDFAFESGSFSLKAPGKDSKLVDAAGKYVVVWRKGQDGGWKLYRDIWNSDPAK >Mature_149_residues TFKHCLLAVVFTSLCMGSAQAQSAKEAIEAANADFVKAYNSKDAAGVASKYMDDAAAFPPDMARVDGRQNIQKLWQGAMD MGISELKLTTLDVQESGDFAFESGSFSLKAPGKDSKLVDAAGKYVVVWRKGQDGGWKLYRDIWNSDPAK
Specific function: Unknown
COG id: COG4319
COG function: function code S; Ketosteroid isomerase homolog
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16268; Mature: 16136
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFKHCLLAVVFTSLCMGSAQAQSAKEAIEAANADFVKAYNSKDAAGVASKYMDDAAAFP CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCC PDMARVDGRQNIQKLWQGAMDMGISELKLTTLDVQESGDFAFESGSFSLKAPGKDSKLVD CHHHHCCCHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCEEEECCCEEEECCCCCCHHHH AAGKYVVVWRKGQDGGWKLYRDIWNSDPAK CCCCEEEEEEECCCCCHHHHHHHHCCCCCC >Mature Secondary Structure TFKHCLLAVVFTSLCMGSAQAQSAKEAIEAANADFVKAYNSKDAAGVASKYMDDAAAFP CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCHHHHHCCCCCHHHHHHHHHHHHHCCC PDMARVDGRQNIQKLWQGAMDMGISELKLTTLDVQESGDFAFESGSFSLKAPGKDSKLVD CHHHHCCCHHHHHHHHHHHHHCCHHHEEEEEEECCCCCCEEEECCCEEEECCCCCCHHHH AAGKYVVVWRKGQDGGWKLYRDIWNSDPAK CCCCEEEEEEECCCCCHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA