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The map label for this gene is ydbC [H]

Identifier: 13472014

GI number: 13472014

Start: 1762192

End: 1763073

Strand: Direct

Name: ydbC [H]

Synonym: mlr2172

Alternate gene names: 13472014

Gene position: 1762192-1763073 (Clockwise)

Preceding gene: 13472005

Following gene: 13472015

Centisome position: 25.05

GC content: 66.44

Gene sequence:

>882_bases
ATGACCGACATCAGCAAGGCCGGAACCTTCAAGCTCGGTGACCGCACCGTGAAGCGCCTCGGCTACGGCGCCATGCAACT
GGCAGGACCGGGCGTCTTCGGCCCGCCGAAGGACCGCGACGCGGCGCTCGCCGTGCTGCGTGAGGCGATCGCCAGCGGCG
TCGACCACATCGACACATCGGATTTCTATGGCCCGCACGTCACCAACCAGATCATCCGCGAGGCGCTGCACCCCTACCCC
GCCAACCTCACCATCGTCACCAAGGTCAGCGCCCGGCGCGGCGCCGATGCATCCTGGATTCCAGCAATGTCGCCCAAGGA
GCTGACCGAGGCCGTGCACGATAATCTGCGCAATCTCGGGCTTGATGTGATCGAGGTCGTCAACCTGCGCTCCATGCATG
GCATCCACGGCCCCGCCGAAGGATCGCTCGAGCCGCAGTTGAACACGCTCGCCGAATTGCAGCGCCAGGGCCTCATCCGC
CATATCGGCATGAGCAACGTCACATCGACCCAGATCGCCCAGGGACGCAGCATCGCCGATATTGTCTGCGTACAGAACCA
GTACAATATCGCGCACCGCGACGACGACGCGCTCATCGACGCGCTTGCCGCCGACGGCATCGCCTATGTGCCGTTCTTCC
CGCTCGGCGGCTTCACGCCGCTGCAGTCGGACACGCTGGCCAATGTCGCCCGGAAACTCGGCGCGACCCCGATGCAGGTG
GCGCTCGCCTGGCTGCTACGCCGCGCGCCCAACATCCTGCTCATCCCCGGCACCTCTTCGGTCGGCCATCTCCGCGAGAA
CCTGGCAGCGGCCGAACTCGACCTGCCGGCCGACGCGCTCGCCGTGCTGAACGGCATAGCGGACGAGAAGGCCGCCGCCT
GA

Upstream 100 bases:

>100_bases
CTGCCATTGTTCGCCCTTCCGTACAGGCTGTGCCGATTGCGCCATATTATCGCGCAGGCGCGCTTTGTCTACATTGGGCC
GATCCAAAGGAGATGAGACC

Downstream 100 bases:

>100_bases
GACTTCCAGCAATATTCCCTGCCGGGGTGGAAACGTCCTCCCCGGCAGTGCCCACACCCCAAGCTCTCTCGGCTTCACAA
AGCGCGTTGACGGCTCGGGT

Product: putative oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MTDISKAGTFKLGDRTVKRLGYGAMQLAGPGVFGPPKDRDAALAVLREAIASGVDHIDTSDFYGPHVTNQIIREALHPYP
ANLTIVTKVSARRGADASWIPAMSPKELTEAVHDNLRNLGLDVIEVVNLRSMHGIHGPAEGSLEPQLNTLAELQRQGLIR
HIGMSNVTSTQIAQGRSIADIVCVQNQYNIAHRDDDALIDALAADGIAYVPFFPLGGFTPLQSDTLANVARKLGATPMQV
ALAWLLRRAPNILLIPGTSSVGHLRENLAAAELDLPADALAVLNGIADEKAAA

Sequences:

>Translated_293_residues
MTDISKAGTFKLGDRTVKRLGYGAMQLAGPGVFGPPKDRDAALAVLREAIASGVDHIDTSDFYGPHVTNQIIREALHPYP
ANLTIVTKVSARRGADASWIPAMSPKELTEAVHDNLRNLGLDVIEVVNLRSMHGIHGPAEGSLEPQLNTLAELQRQGLIR
HIGMSNVTSTQIAQGRSIADIVCVQNQYNIAHRDDDALIDALAADGIAYVPFFPLGGFTPLQSDTLANVARKLGATPMQV
ALAWLLRRAPNILLIPGTSSVGHLRENLAAAELDLPADALAVLNGIADEKAAA
>Mature_292_residues
TDISKAGTFKLGDRTVKRLGYGAMQLAGPGVFGPPKDRDAALAVLREAIASGVDHIDTSDFYGPHVTNQIIREALHPYPA
NLTIVTKVSARRGADASWIPAMSPKELTEAVHDNLRNLGLDVIEVVNLRSMHGIHGPAEGSLEPQLNTLAELQRQGLIRH
IGMSNVTSTQIAQGRSIADIVCVQNQYNIAHRDDDALIDALAADGIAYVPFFPLGGFTPLQSDTLANVARKLGATPMQVA
LAWLLRRAPNILLIPGTSSVGHLRENLAAAELDLPADALAVLNGIADEKAAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldo/keto reductase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1787674, Length=285, Percent_Identity=73.6842105263158, Blast_Score=440, Evalue=1e-125,
Organism=Escherichia coli, GI87081735, Length=312, Percent_Identity=25.9615384615385, Blast_Score=89, Evalue=3e-19,
Organism=Escherichia coli, GI1789199, Length=335, Percent_Identity=26.865671641791, Blast_Score=74, Evalue=8e-15,
Organism=Escherichia coli, GI1788070, Length=313, Percent_Identity=25.5591054313099, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1786400, Length=245, Percent_Identity=27.3469387755102, Blast_Score=67, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24663317, Length=300, Percent_Identity=26, Blast_Score=72, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001395
- InterPro:   IPR023210 [H]

Pfam domain/function: PF00248 Aldo_ket_red [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 31174; Mature: 31043

Theoretical pI: Translated: 6.23; Mature: 6.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDISKAGTFKLGDRTVKRLGYGAMQLAGPGVFGPPKDRDAALAVLREAIASGVDHIDTS
CCCCCCCCCEEHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
DFYGPHVTNQIIREALHPYPANLTIVTKVSARRGADASWIPAMSPKELTEAVHDNLRNLG
CCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
LDVIEVVNLRSMHGIHGPAEGSLEPQLNTLAELQRQGLIRHIGMSNVTSTQIAQGRSIAD
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHH
IVCVQNQYNIAHRDDDALIDALAADGIAYVPFFPLGGFTPLQSDTLANVARKLGATPMQV
EEEECCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH
ALAWLLRRAPNILLIPGTSSVGHLRENLAAAELDLPADALAVLNGIADEKAAA
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TDISKAGTFKLGDRTVKRLGYGAMQLAGPGVFGPPKDRDAALAVLREAIASGVDHIDTS
CCCCCCCCEEHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCC
DFYGPHVTNQIIREALHPYPANLTIVTKVSARRGADASWIPAMSPKELTEAVHDNLRNLG
CCCCCHHHHHHHHHHHCCCCCCEEEEEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
LDVIEVVNLRSMHGIHGPAEGSLEPQLNTLAELQRQGLIRHIGMSNVTSTQIAQGRSIAD
HHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCHHH
IVCVQNQYNIAHRDDDALIDALAADGIAYVPFFPLGGFTPLQSDTLANVARKLGATPMQV
EEEECCCCCCCCCCHHHHHHHHHHCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHHH
ALAWLLRRAPNILLIPGTSSVGHLRENLAAAELDLPADALAVLNGIADEKAAA
HHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1665988; 9097039; 9278503; 9748275 [H]