| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is blh [H]
Identifier: 13472001
GI number: 13472001
Start: 1752438
End: 1753733
Strand: Direct
Name: blh [H]
Synonym: mlr2158
Alternate gene names: 13472001
Gene position: 1752438-1753733 (Clockwise)
Preceding gene: 13471999
Following gene: 13472002
Centisome position: 24.91
GC content: 62.19
Gene sequence:
>1296_bases ATGACCATGATCCGTGTAAATGACGTGCTGAGCGTCGGTCCTCAGCCCTCGATCTCCGAAATCCGGTCGCTTGCCGGCCA TGGGTTTGCGGGAATGATCAACGCTCGACCTGACGGCGAAGAGGCTTCCCAGCCCGGAAACGCCGCCGAGCGGGAGGCGG CTGGTCATGCCGATGTTCCCTACACCTTCATACCCGTGACGATGCCAACCATCACCGAGGCGGACGTGCGGGCCTTCCAG AGGGCCATGGCCGATGCCGGCGGCCCGGTCTTTGCTCATTGCAAGACCGGCACGCGTGCCCTGACCCTGTATGCACTGGG CGAGGCGCTCGACGGCCGTATGTCATCCCAGGATATGGCGGCCCTCGGACAGAAGCTCGGCATCGACCTGTCGGCGGCGT CGCGATGGTTCGAAGCGCACAGGCAACTGCGACCGGACGTGAAGGGGTTCTTCGATCCCCGGACAGGAAGCGTGCAATAT GTGGTTTCGGACCCGGACACCCGAAAATGCGCCATTGTCGATCCGGTTCTTGATTTCGACGAGAAGTCAGGAGCGACCAC GACGCGCAACGCCGACGCGATGCTTTCCTACATTGCCGAGAACGGGTTGAGCGTCGAATGGATTCTCGACACCCATCCTC ATGCCGACCATTTTTCGGCCGCGCAGTATCTGAAGGAGAAGACGGGCGCCCCCACCGCGATCGGGGCACCGGTGGTCGAT GTCCAGCGCCTGTGGCGCGGCATCTACAACTGGCCCGAACTTCGCGTCGACGGCTCGCAGTGGGACAGGCTGTTCTCGGA TGGCGACACTTTCAAGGTCGGTTCCATGGCGGCGCGCGTGATGTTTTCGCCCGGTCACACCCTGGCGTCGATCACCTACG TGATCGGCAATGCGGCCTTTGTTCACGACACCATCTTCATGCCTGACAGCGGCACGGCCCGTGCCGATTTTCCCGGTGGT GACGCTCGCGTCCTGTGGAAATCGATCCAGAAGATCCTGGACCTTCCGGACGAAACCCGCCTGTTTACAGGCCATGATTA CCAGCCGGGTGGACGCGCGCCGAAATGGGAAAGCACGGTCGGCGAACAGAAGCGCGCCAATGCACATCTGGCCGGCGTGA ACGAAGAGGCCTTTGCCGGATTGCGAGTGGCGCGTGACCGAACGCTGCCAATGCCGAAACTCATCTTGCATGCCTTGCAG GTCAACATCCAGGCGGGGCGTCTGCCCGAGCCGGAGCCGAACGGCACGCGCTATCTGAAATTTCCCCTCGACGCATTGCA AGGAGCAGTGTGGTGA
Upstream 100 bases:
>100_bases GGCCGGCAACCCGGCCGCGAAATTTCCAGACAGGCACCTTGTACGAATTTCATTATACATTATATGCAATTGTATATTGA TAGGAAACCAGGTGCTCGAT
Downstream 100 bases:
>100_bases GCGAGTTCCAGCCTGATGCGGTGAACATGTCGCCCGCCGCCATGGAATCGCGCGCGGGCGAAGTGGCGGCCTTGTTGAAG ACACTGGCGCATCCAATGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTMIRVNDVLSVGPQPSISEIRSLAGHGFAGMINARPDGEEASQPGNAAEREAAGHADVPYTFIPVTMPTITEADVRAFQ RAMADAGGPVFAHCKTGTRALTLYALGEALDGRMSSQDMAALGQKLGIDLSAASRWFEAHRQLRPDVKGFFDPRTGSVQY VVSDPDTRKCAIVDPVLDFDEKSGATTTRNADAMLSYIAENGLSVEWILDTHPHADHFSAAQYLKEKTGAPTAIGAPVVD VQRLWRGIYNWPELRVDGSQWDRLFSDGDTFKVGSMAARVMFSPGHTLASITYVIGNAAFVHDTIFMPDSGTARADFPGG DARVLWKSIQKILDLPDETRLFTGHDYQPGGRAPKWESTVGEQKRANAHLAGVNEEAFAGLRVARDRTLPMPKLILHALQ VNIQAGRLPEPEPNGTRYLKFPLDALQGAVW
Sequences:
>Translated_431_residues MTMIRVNDVLSVGPQPSISEIRSLAGHGFAGMINARPDGEEASQPGNAAEREAAGHADVPYTFIPVTMPTITEADVRAFQ RAMADAGGPVFAHCKTGTRALTLYALGEALDGRMSSQDMAALGQKLGIDLSAASRWFEAHRQLRPDVKGFFDPRTGSVQY VVSDPDTRKCAIVDPVLDFDEKSGATTTRNADAMLSYIAENGLSVEWILDTHPHADHFSAAQYLKEKTGAPTAIGAPVVD VQRLWRGIYNWPELRVDGSQWDRLFSDGDTFKVGSMAARVMFSPGHTLASITYVIGNAAFVHDTIFMPDSGTARADFPGG DARVLWKSIQKILDLPDETRLFTGHDYQPGGRAPKWESTVGEQKRANAHLAGVNEEAFAGLRVARDRTLPMPKLILHALQ VNIQAGRLPEPEPNGTRYLKFPLDALQGAVW >Mature_430_residues TMIRVNDVLSVGPQPSISEIRSLAGHGFAGMINARPDGEEASQPGNAAEREAAGHADVPYTFIPVTMPTITEADVRAFQR AMADAGGPVFAHCKTGTRALTLYALGEALDGRMSSQDMAALGQKLGIDLSAASRWFEAHRQLRPDVKGFFDPRTGSVQYV VSDPDTRKCAIVDPVLDFDEKSGATTTRNADAMLSYIAENGLSVEWILDTHPHADHFSAAQYLKEKTGAPTAIGAPVVDV QRLWRGIYNWPELRVDGSQWDRLFSDGDTFKVGSMAARVMFSPGHTLASITYVIGNAAFVHDTIFMPDSGTARADFPGGD ARVLWKSIQKILDLPDETRLFTGHDYQPGGRAPKWESTVGEQKRANAHLAGVNEEAFAGLRVARDRTLPMPKLILHALQV NIQAGRLPEPEPNGTRYLKFPLDALQGAVW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-B beta-lactamase family [H]
Homologues:
Organism=Homo sapiens, GI41327741, Length=264, Percent_Identity=28.030303030303, Blast_Score=101, Evalue=2e-21, Organism=Escherichia coli, GI1787158, Length=188, Percent_Identity=30.3191489361702, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17538952, Length=266, Percent_Identity=26.3157894736842, Blast_Score=82, Evalue=7e-16, Organism=Drosophila melanogaster, GI221330176, Length=262, Percent_Identity=28.2442748091603, Blast_Score=107, Evalue=2e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005939 - InterPro: IPR001279 [H]
Pfam domain/function: PF04273 DUF442; PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 46892; Mature: 46761
Theoretical pI: Translated: 6.10; Mature: 6.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMIRVNDVLSVGPQPSISEIRSLAGHGFAGMINARPDGEEASQPGNAAEREAAGHADVP CEEEEECHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCC YTFIPVTMPTITEADVRAFQRAMADAGGPVFAHCKTGTRALTLYALGEALDGRMSSQDMA EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHCCCCCHHHHH ALGQKLGIDLSAASRWFEAHRQLRPDVKGFFDPRTGSVQYVVSDPDTRKCAIVDPVLDFD HHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCEEEEECHHHCCC EKSGATTTRNADAMLSYIAENGLSVEWILDTHPHADHFSAAQYLKEKTGAPTAIGAPVVD CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHH VQRLWRGIYNWPELRVDGSQWDRLFSDGDTFKVGSMAARVMFSPGHTLASITYVIGNAAF HHHHHHHHCCCCCEEECHHHHHHHHCCCCCEEHHHHEEEEEECCCCHHHHHHHHHCCEEE VHDTIFMPDSGTARADFPGGDARVLWKSIQKILDLPDETRLFTGHDYQPGGRAPKWESTV EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHH GEQKRANAHLAGVNEEAFAGLRVARDRTLPMPKLILHALQVNIQAGRLPEPEPNGTRYLK CHHHHCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEEE FPLDALQGAVW ECHHHHCCCCC >Mature Secondary Structure TMIRVNDVLSVGPQPSISEIRSLAGHGFAGMINARPDGEEASQPGNAAEREAAGHADVP EEEEECHHHHCCCCCCHHHHHHHHCCCCEEEECCCCCCCCCCCCCCHHHHHCCCCCCCC YTFIPVTMPTITEADVRAFQRAMADAGGPVFAHCKTGTRALTLYALGEALDGRMSSQDMA EEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCEEEEEEEHHHHHCCCCCHHHHH ALGQKLGIDLSAASRWFEAHRQLRPDVKGFFDPRTGSVQYVVSDPDTRKCAIVDPVLDFD HHHHHHCCCHHHHHHHHHHHHHHCCCHHHCCCCCCCCEEEEECCCCCCEEEEECHHHCCC EKSGATTTRNADAMLSYIAENGLSVEWILDTHPHADHFSAAQYLKEKTGAPTAIGAPVVD CCCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCHHHHHHHHHHHCCCCCCCCCCHHH VQRLWRGIYNWPELRVDGSQWDRLFSDGDTFKVGSMAARVMFSPGHTLASITYVIGNAAF HHHHHHHHCCCCCEEECHHHHHHHHCCCCCEEHHHHEEEEEECCCCHHHHHHHHHCCEEE VHDTIFMPDSGTARADFPGGDARVLWKSIQKILDLPDETRLFTGHDYQPGGRAPKWESTV EEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCHHHH GEQKRANAHLAGVNEEAFAGLRVARDRTLPMPKLILHALQVNIQAGRLPEPEPNGTRYLK CHHHHCCCEEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHEEECCCCCCCCCCCCEEEE FPLDALQGAVW ECHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194 [H]