| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
Click here to switch to the map view.
The map label for this gene is 13471991
Identifier: 13471991
GI number: 13471991
Start: 1743716
End: 1744222
Strand: Direct
Name: 13471991
Synonym: mlr2143
Alternate gene names: NA
Gene position: 1743716-1744222 (Clockwise)
Preceding gene: 13471989
Following gene: 13471995
Centisome position: 24.78
GC content: 65.88
Gene sequence:
>507_bases ATGACCGGGCTTGCCGACGCCACGGTGTTGATCGTGCGCCATGGCGAAAAGCCCGACAGCGGCCCGGGCCTGTCGCCCGA AGGCGAAGCCCGCGCGCAGGCCTATGTCGCCTATTTCCAGCCCTTCATGCTGGACGGCGTCGCCTTCCGGCCCGATATGC TGGTGGCCAGCACCGATTCCAAGAACAGCGCACGCGAGCGGCTGACGCTCACCCCGCTCAGCCAGGCGCTGAAACTCCCC ATTGACCAGCGCTTCGCCGACAAGGACGTCAAAGCCCTCGTCGCGGCACTCTCCAGCGAAACCCACGGCAAGTCGATCCT GATCGCCTGGCATCACGGCCAGCTGGGAAAACTCATCAAGGCCTTCGGCGCCGACCCGCAGGCCCTGCTGCCGAACGGCA AATGGCCCGGCGATGTCTTCAACTGGGTGGTCGTGCTGCGCTTCGATCAGGCCGGGCACCTGGTGCCGGGCTCGGCGCGG ATTATTGAGGAGAAGTTGCCAGGGTAG
Upstream 100 bases:
>100_bases GGCCTCGAAAACCGCTGGAAGGACCGCCATGAAACGCCTTGTTCTCGCCGCCCTGTGGATGATGGCGCTTGCTCTGTCCG CCCATGCCGCAAGCGATAAG
Downstream 100 bases:
>100_bases ATGCGCTGGTGCGAGGCGCGCAGACCTTTCGCCCCTACCTTCGCACCCGCGACTTCAGCCATCGGTCAAACGCCACCGCC AGGATCAGGATGAGCCCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: Conserved Hypothethical Protein
Number of amino acids: Translated: 168; Mature: 167
Protein sequence:
>168_residues MTGLADATVLIVRHGEKPDSGPGLSPEGEARAQAYVAYFQPFMLDGVAFRPDMLVASTDSKNSARERLTLTPLSQALKLP IDQRFADKDVKALVAALSSETHGKSILIAWHHGQLGKLIKAFGADPQALLPNGKWPGDVFNWVVVLRFDQAGHLVPGSAR IIEEKLPG
Sequences:
>Translated_168_residues MTGLADATVLIVRHGEKPDSGPGLSPEGEARAQAYVAYFQPFMLDGVAFRPDMLVASTDSKNSARERLTLTPLSQALKLP IDQRFADKDVKALVAALSSETHGKSILIAWHHGQLGKLIKAFGADPQALLPNGKWPGDVFNWVVVLRFDQAGHLVPGSAR IIEEKLPG >Mature_167_residues TGLADATVLIVRHGEKPDSGPGLSPEGEARAQAYVAYFQPFMLDGVAFRPDMLVASTDSKNSARERLTLTPLSQALKLPI DQRFADKDVKALVAALSSETHGKSILIAWHHGQLGKLIKAFGADPQALLPNGKWPGDVFNWVVVLRFDQAGHLVPGSARI IEEKLPG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18118; Mature: 17987
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTGLADATVLIVRHGEKPDSGPGLSPEGEARAQAYVAYFQPFMLDGVAFRPDMLVASTDS CCCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCEEEEECCC KNSARERLTLTPLSQALKLPIDQRFADKDVKALVAALSSETHGKSILIAWHHGQLGKLIK CCCHHHEEEECCHHHHHCCCCCHHHCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHH AFGADPQALLPNGKWPGDVFNWVVVLRFDQAGHLVPGSARIIEEKLPG HHCCCCCEECCCCCCCHHHEEEEEEEEECCCCCCCCCCHHHHHHCCCC >Mature Secondary Structure TGLADATVLIVRHGEKPDSGPGLSPEGEARAQAYVAYFQPFMLDGVAFRPDMLVASTDS CCCCCEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCEEECCCEEEEECCC KNSARERLTLTPLSQALKLPIDQRFADKDVKALVAALSSETHGKSILIAWHHGQLGKLIK CCCHHHEEEECCHHHHHCCCCCHHHCHHHHHHHHHHHHCCCCCCEEEEEEECCCHHHHHH AFGADPQALLPNGKWPGDVFNWVVVLRFDQAGHLVPGSARIIEEKLPG HHCCCCCEECCCCCCCHHHEEEEEEEEECCCCCCCCCCHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA