| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471977
Identifier: 13471977
GI number: 13471977
Start: 1731953
End: 1732450
Strand: Direct
Name: 13471977
Synonym: mlr2123
Alternate gene names: NA
Gene position: 1731953-1732450 (Clockwise)
Preceding gene: 13471975
Following gene: 13471978
Centisome position: 24.62
GC content: 68.88
Gene sequence:
>498_bases ATGTCGCTCAGCCCCTTGCTCAATGCCTCGCCCGTCATCCAGCTCCACGCGCTGATCGCCATCGCCGCGCTGTTGCTCGG CGCGGTGCAGCTCTGGCGCACCAAGGGCGACCGGCTGCACCGCGCGCTTGGCCGCGTCTGGGTGGCACTGATGGCGACGG TCGCCGGCTCCGGCCTGTTCATCTGGACGATCCGGCTGTGGGGGCCGTTCAGCCCGATCCACCTTCTGTCACTGTTCGTG CTGGCGATGCTGTGGCGCGGCGTGCGCGCCGCGCGCGGCGGCAACATTGCCGCCCACCGCCGCATCATGCAGGGCACCTA CATTTTCGGCCTGATCGTCACCGGGCTTTTGACCTTCATTCCCGGCCGCACCATGTATGCCGTCGCCTTCGGCCCGCAGG GCGCGACACCACAGAAGCTGGCGATCTTCGCCGCTTTGGTCATCCTCGCGGCAGCGGCCGGCCTCTATGCCGCGCGTGGT GCGCGGGTGCCAGGCTAA
Upstream 100 bases:
>100_bases GCGGGGCTGTTTTGTCAGTGGACGACCAGCCCTCGGTCGCCATCGCCCTTGCCGCCCGAGCGCGCCCTCGGCCATAATCC GCCATTCCGCGGAGACACCG
Downstream 100 bases:
>100_bases GTGTCAGCCTATCCCGGCGGAGCCTCGGTATCCCGCCCTTTCCGACCGCCTCCTTGTTCTGGCCATGTTGCACTGCGAAA AGCATGTTGCATTGCGATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MSLSPLLNASPVIQLHALIAIAALLLGAVQLWRTKGDRLHRALGRVWVALMATVAGSGLFIWTIRLWGPFSPIHLLSLFV LAMLWRGVRAARGGNIAAHRRIMQGTYIFGLIVTGLLTFIPGRTMYAVAFGPQGATPQKLAIFAALVILAAAAGLYAARG ARVPG
Sequences:
>Translated_165_residues MSLSPLLNASPVIQLHALIAIAALLLGAVQLWRTKGDRLHRALGRVWVALMATVAGSGLFIWTIRLWGPFSPIHLLSLFV LAMLWRGVRAARGGNIAAHRRIMQGTYIFGLIVTGLLTFIPGRTMYAVAFGPQGATPQKLAIFAALVILAAAAGLYAARG ARVPG >Mature_164_residues SLSPLLNASPVIQLHALIAIAALLLGAVQLWRTKGDRLHRALGRVWVALMATVAGSGLFIWTIRLWGPFSPIHLLSLFVL AMLWRGVRAARGGNIAAHRRIMQGTYIFGLIVTGLLTFIPGRTMYAVAFGPQGATPQKLAIFAALVILAAAAGLYAARGA RVPG
Specific function: Unknown
COG id: COG5395
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17573; Mature: 17442
Theoretical pI: Translated: 12.71; Mature: 12.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSPLLNASPVIQLHALIAIAALLLGAVQLWRTKGDRLHRALGRVWVALMATVAGSGLF CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEE IWTIRLWGPFSPIHLLSLFVLAMLWRGVRAARGGNIAAHRRIMQGTYIFGLIVTGLLTFI EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PGRTMYAVAFGPQGATPQKLAIFAALVILAAAAGLYAARGARVPG CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SLSPLLNASPVIQLHALIAIAALLLGAVQLWRTKGDRLHRALGRVWVALMATVAGSGLF CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCEE IWTIRLWGPFSPIHLLSLFVLAMLWRGVRAARGGNIAAHRRIMQGTYIFGLIVTGLLTFI EEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC PGRTMYAVAFGPQGATPQKLAIFAALVILAAAAGLYAARGARVPG CCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA