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The map label for this gene is ynhG [H]

Identifier: 13471882

GI number: 13471882

Start: 1640206

End: 1640934

Strand: Direct

Name: ynhG [H]

Synonym: mlr1998

Alternate gene names: 13471882

Gene position: 1640206-1640934 (Clockwise)

Preceding gene: 13471881

Following gene: 13471883

Centisome position: 23.31

GC content: 64.06

Gene sequence:

>729_bases
ATGGGCCAAGCAATGACCAGACGCTCGAAGACGAGGTTCGGCACGGACGAACGGGCAAGGGGAACCGGCGGCAGGCACGC
GGCAGGTCTGGCGGTTGTGCTGGCGCTGGGGCTGGTTTTTTCCACCGCCGCGTCCCTTGCCGCCGGGACCCAGGTCTACG
ATCCCAAGACACGTCAGTGGACGGACTACAATCGCACCAAGGCCTACCAGTATTACAAGCTGCACAAGCAGGTCCCGGAA
TCCTTCCGTCCGCAACTGGTCAAGTTCCGGACCGCCGAGCAGCCCGGCACCATCATCATCGATGGCAACCAGCATTTCCT
CTATCTCGTCCAGCCCGGCCAGCAAGCGATCCGCTACGGCATCGGCGTCGGCAGGGACGGCTTCGGATGGGCCGGTATCG
TCAAGGTCGGGCGCATGGCGGAGTGGCCGACCTGGACACCGCCGGCCGAAATGGTTGCCCGGGATCCAAAAGCCCGGCCC
TGGGCCAATGGCATGCCCGGGGGACCCGACAATCCGCTCGGCGCGCGGGCGCTCTACCTCTATGAAGGCGACCACGACAC
GATCTACCGAATCCACGGCACGCCCGAACCGTGGACGATCGGTCTGGACGTGTCTTCCGGCTGTATCCGCATGAACAATG
GCGACATCATCGACCTGCATTCCCGTATCAAGGTCGGGGCGAAGGTCATCGTGCTGATGCAGGGGGCTGCCCTCTACAAG
GGCGTCTGA

Upstream 100 bases:

>100_bases
AGGAGGCGATCGCCATGAGCTATGCGCTGCAGGTCGAGCGACAGGCGCCCTATGCATACGCCGAGCAATGGGTGGCCACT
AACGCGGCGCGCGTCGAAGG

Downstream 100 bases:

>100_bases
CACAAGGGCGTCTGATCGAGGACGGGCGTACAGTTCGACAATGGGGATAAGACAATGGCTATGGTGACCCGCAGGCAGTT
CCGGATGAGGCACTGGACCA

Product: carnitine operon oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MGQAMTRRSKTRFGTDERARGTGGRHAAGLAVVLALGLVFSTAASLAAGTQVYDPKTRQWTDYNRTKAYQYYKLHKQVPE
SFRPQLVKFRTAEQPGTIIIDGNQHFLYLVQPGQQAIRYGIGVGRDGFGWAGIVKVGRMAEWPTWTPPAEMVARDPKARP
WANGMPGGPDNPLGARALYLYEGDHDTIYRIHGTPEPWTIGLDVSSGCIRMNNGDIIDLHSRIKVGAKVIVLMQGAALYK
GV

Sequences:

>Translated_242_residues
MGQAMTRRSKTRFGTDERARGTGGRHAAGLAVVLALGLVFSTAASLAAGTQVYDPKTRQWTDYNRTKAYQYYKLHKQVPE
SFRPQLVKFRTAEQPGTIIIDGNQHFLYLVQPGQQAIRYGIGVGRDGFGWAGIVKVGRMAEWPTWTPPAEMVARDPKARP
WANGMPGGPDNPLGARALYLYEGDHDTIYRIHGTPEPWTIGLDVSSGCIRMNNGDIIDLHSRIKVGAKVIVLMQGAALYK
GV
>Mature_241_residues
GQAMTRRSKTRFGTDERARGTGGRHAAGLAVVLALGLVFSTAASLAAGTQVYDPKTRQWTDYNRTKAYQYYKLHKQVPES
FRPQLVKFRTAEQPGTIIIDGNQHFLYLVQPGQQAIRYGIGVGRDGFGWAGIVKVGRMAEWPTWTPPAEMVARDPKARPW
ANGMPGGPDNPLGARALYLYEGDHDTIYRIHGTPEPWTIGLDVSSGCIRMNNGDIIDLHSRIKVGAKVIVLMQGAALYKG
V

Specific function: Responsible, at least in part, for generating a meso- diaminopimelyl-3-a meso-diaminopimelyl-3 cross-link [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 LysM repeat [H]

Homologues:

Organism=Escherichia coli, GI1787968, Length=143, Percent_Identity=39.8601398601399, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1787040, Length=151, Percent_Identity=35.7615894039735, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1788299, Length=143, Percent_Identity=34.2657342657343, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787356, Length=140, Percent_Identity=34.2857142857143, Blast_Score=70, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018392
- InterPro:   IPR002482
- InterPro:   IPR005490 [H]

Pfam domain/function: PF01476 LysM; PF03734 YkuD [H]

EC number: NA

Molecular weight: Translated: 26625; Mature: 26494

Theoretical pI: Translated: 10.26; Mature: 10.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGQAMTRRSKTRFGTDERARGTGGRHAAGLAVVLALGLVFSTAASLAAGTQVYDPKTRQW
CCCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
TDYNRTKAYQYYKLHKQVPESFRPQLVKFRTAEQPGTIIIDGNQHFLYLVQPGQQAIRYG
CCCCCHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCEEEEECCCEEEEEECCCHHHHHHH
IGVGRDGFGWAGIVKVGRMAEWPTWTPPAEMVARDPKARPWANGMPGGPDNPLGARALYL
CCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
YEGDHDTIYRIHGTPEPWTIGLDVSSGCIRMNNGDIIDLHSRIKVGAKVIVLMQGAALYK
EECCCCEEEEEECCCCCEEEEEECCCCEEEECCCCEEEECHHHHCCEEEEEEEECCHHHC
GV
CC
>Mature Secondary Structure 
GQAMTRRSKTRFGTDERARGTGGRHAAGLAVVLALGLVFSTAASLAAGTQVYDPKTRQW
CCCHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCC
TDYNRTKAYQYYKLHKQVPESFRPQLVKFRTAEQPGTIIIDGNQHFLYLVQPGQQAIRYG
CCCCCHHHHHHHHHHHHCCHHHCCCEEEEEECCCCCEEEEECCCEEEEEECCCHHHHHHH
IGVGRDGFGWAGIVKVGRMAEWPTWTPPAEMVARDPKARPWANGMPGGPDNPLGARALYL
CCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEE
YEGDHDTIYRIHGTPEPWTIGLDVSSGCIRMNNGDIIDLHSRIKVGAKVIVLMQGAALYK
EECCCCEEEEEECCCCCEEEEEECCCCEEEECCCCEEEECHHHHCCEEEEEEEECCHHHC
GV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503; 9097039 [H]