| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471811
Identifier: 13471811
GI number: 13471811
Start: 1568539
End: 1569297
Strand: Direct
Name: 13471811
Synonym: mlr1907
Alternate gene names: NA
Gene position: 1568539-1569297 (Clockwise)
Preceding gene: 13471809
Following gene: 13471813
Centisome position: 22.29
GC content: 66.53
Gene sequence:
>759_bases ATGTCCGGGCGGTCGCCCGACCCAGCCTATCTAGGCACGCGCCGGGACGACGGCCAGTCGCCGGCGGATAAATTCGCCGG CGACTTCGCGGACCTGATGTCTTCGTCAGGGGAACCGGCTCATTTCGGCCGGCGCACCGCCCGCACCACCGGGGTGGATG TACTGCCACAGAACAGGCGGTCGGCACCGTCGGATTCCAGCCCCGATACGGTCATGCCGGCCGGCAGGTCGAGCCGCTCC AGAAGCTTGCCGGTTTTCGGGTCGACGCGGCGCAGATCGCTCTCGTCGCCCTCCCAGGTGCCGTGCCACAGCTCGCCATC CACCCAGGTCACGCCGGTGACGAAGCGGCTGGATTCGACGGTGCGCAGGATTTTCCCGGTCTCGGGGTCGATCTGGTGGA TCTTGCGCTCGCGGTACTGCCCCACCCAGAGCGTGCCTTCGGCCCAGGTGAGCCCGGAGTCGCGGCCGCCGCCGGGCGCC GGGATGGTGGAGAGCACCGCGCCCGTATCGGGATCGATCTTCTGGATGCGGTCATTGGCGAGCTGGAAGAAATACCGGCC GTCAAAGGCGGTGCCGGCATGTGCGGCGACATCGATCGAACGCAGCGTCTGCCCGCTTTGCGGATCGAAGGCGTTCAGCC TGTCGCCCGAGGCAAACCAGACGTTCTCGCCGTCAAAGCTCACCCCATGTATCCGCTCCACGCCGGGAAAGGGTCCGTAT TCGCGCAGGATTTCGGCCGGTGAATGTTTCATGTCTTGA
Upstream 100 bases:
>100_bases TGCCGTGATCGACCTGCCACACGCCAAGGCCTAGCTGGGGAATGGCGGCGCCGTCGTTCAGCGTGATCAGTTCGGGCATG GTCGGGTCCTTTACGAAGAA
Downstream 100 bases:
>100_bases TCCTCGATCGTGGTCGTCATCCAAGGGCTCACGCAGGGCGCAGCTAGGCCGGCCTCACCTGAATATCGCCGCACCTTAGC CGTTCGGCAGCGGCGCCGGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MSGRSPDPAYLGTRRDDGQSPADKFAGDFADLMSSSGEPAHFGRRTARTTGVDVLPQNRRSAPSDSSPDTVMPAGRSSRS RSLPVFGSTRRRSLSSPSQVPCHSSPSTQVTPVTKRLDSTVRRIFPVSGSIWWILRSRYCPTQSVPSAQVSPESRPPPGA GMVESTAPVSGSIFWMRSLASWKKYRPSKAVPACAATSIERSVCPLCGSKAFSLSPEANQTFSPSKLTPCIRSTPGKGPY SRRISAGECFMS
Sequences:
>Translated_252_residues MSGRSPDPAYLGTRRDDGQSPADKFAGDFADLMSSSGEPAHFGRRTARTTGVDVLPQNRRSAPSDSSPDTVMPAGRSSRS RSLPVFGSTRRRSLSSPSQVPCHSSPSTQVTPVTKRLDSTVRRIFPVSGSIWWILRSRYCPTQSVPSAQVSPESRPPPGA GMVESTAPVSGSIFWMRSLASWKKYRPSKAVPACAATSIERSVCPLCGSKAFSLSPEANQTFSPSKLTPCIRSTPGKGPY SRRISAGECFMS >Mature_251_residues SGRSPDPAYLGTRRDDGQSPADKFAGDFADLMSSSGEPAHFGRRTARTTGVDVLPQNRRSAPSDSSPDTVMPAGRSSRSR SLPVFGSTRRRSLSSPSQVPCHSSPSTQVTPVTKRLDSTVRRIFPVSGSIWWILRSRYCPTQSVPSAQVSPESRPPPGAG MVESTAPVSGSIFWMRSLASWKKYRPSKAVPACAATSIERSVCPLCGSKAFSLSPEANQTFSPSKLTPCIRSTPGKGPYS RRISAGECFMS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27032; Mature: 26900
Theoretical pI: Translated: 11.11; Mature: 11.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.2 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGRSPDPAYLGTRRDDGQSPADKFAGDFADLMSSSGEPAHFGRRTARTTGVDVLPQNRR CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCC SAPSDSSPDTVMPAGRSSRSRSLPVFGSTRRRSLSSPSQVPCHSSPSTQVTPVTKRLDST CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH VRRIFPVSGSIWWILRSRYCPTQSVPSAQVSPESRPPPGAGMVESTAPVSGSIFWMRSLA HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH SWKKYRPSKAVPACAATSIERSVCPLCGSKAFSLSPEANQTFSPSKLTPCIRSTPGKGPY HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHCHHHHCCCCCCCH SRRISAGECFMS HHCCCCCHHHCC >Mature Secondary Structure SGRSPDPAYLGTRRDDGQSPADKFAGDFADLMSSSGEPAHFGRRTARTTGVDVLPQNRR CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHHHCCHHHHCCCCCCCCCCCC SAPSDSSPDTVMPAGRSSRSRSLPVFGSTRRRSLSSPSQVPCHSSPSTQVTPVTKRLDST CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHH VRRIFPVSGSIWWILRSRYCPTQSVPSAQVSPESRPPPGAGMVESTAPVSGSIFWMRSLA HHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH SWKKYRPSKAVPACAATSIERSVCPLCGSKAFSLSPEANQTFSPSKLTPCIRSTPGKGPY HHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCHHHCHHHHCCCCCCCH SRRISAGECFMS HHCCCCCHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA