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The map label for this gene is ydgJ [C]

Identifier: 13471791

GI number: 13471791

Start: 1547725

End: 1548912

Strand: Reverse

Name: ydgJ [C]

Synonym: mll1882

Alternate gene names: 13471791

Gene position: 1548912-1547725 (Counterclockwise)

Preceding gene: 13471800

Following gene: 13471789

Centisome position: 22.01

GC content: 68.27

Gene sequence:

>1188_bases
ATGGTCTACGCAACATCGGATGGGTCGGCGGGCAAGCGCCTGAGGGTCGGCATGGTCGGCGGCGGCCGCAATGCCTTCAT
CGGCGCCGTGCATCGGCTGGCCATGCGCCTCGACGACCAGATCGTGCTGGTGGCCGGTGCGCTGTCATCCGACCCGGAGA
ATGCCGCTGCCTCGGCCGCCGAGATCGGCATCGCGCCGGAGCGCAGCTATGCCGATTATCATGCAATGGCGCTGGCCGAA
GCCGCGCGGCCCGATGGCATCGAGGCGGTCGTCATCGTCACGCCCAACCATCTGCACGCGCCGATCGCCACCGCCTTCCT
CGAGGCGGGCATCGACGTGATCTGCGACAAGCCGCTGTCGACCACGCTCCGCGACGCCGAAGCGCTGGTGACGCTGGCGC
GCGCCAAAAAACGCCGCTTCGTCGTGACGCTCAACAACACCGGCTACGCCATGGTCCGGCAGGCGCGCGAAATGGTGATG
GCAGGTGAACTCGGGCGCATCGTCTCGGTGCATGGCGCCTATATCCAGGACTGGCTGACCAGGCCGATCGACGCGGAAGG
CCAGAAGCAGGCGGAGTGGCGCACCGACCCGGCCAGGGCCGGGCAGTCGGCGGTGCTGGCCGATATCGGCGTGCATGCCT
TCAATCTGGCGAGCTATATTTCGAGTTGCGAGGCCGAGGCGGTGTCGGCGGACCTGTTCACCGCGGTGCCTGGGCGCCGG
CTCGACGACAATGCGCATGTCATGGTGCGCTGGACGGATGGAGCGCGCGGCACGATCCTGGCCAGCCAGACCTCGCCCGG
CCACTACTATGATCTGTCCGTGCGCATCTATGGCGACAAAGCCGGCCTCGAATGGTCGGGCGGGCGGCCGGAGGAACTGC
GTTTTTCCGTCTATGGCGAGGAAACCCGCACGCTGGTGCGCGGCGGCCATGGTTCGACCGAAGAAAGCCGGCGCGTCTCG
CGCATGCCGGCGGCGCATCCGGAAGGCTATATCGAGGCCTTCGCCAATTTCTACCGCGACGCCGCCGACATCATCCGCGC
GCATCGCTCCGGTGGCGTGGTCGATGCCGCGCGCGCGGCACAGGTGCCGGATGTTGTCGACGGCGCGCGCGGCGTGAAGT
TTGTCGCCGCAGCGGTGGCATCGAACGCGGCGGGCGGCGCATGGACGGCGGCGCGGTTTGCAGGGTGA

Upstream 100 bases:

>100_bases
CAACGCCTTGAAGTCACGGCATGGATCCTGGGGTCTGCGCCGCGTCGCTGCGCTCCTTGCTTCGCCCCAGGATGACGAAG
TGATAGGTGGAGGAGAAAGC

Downstream 100 bases:

>100_bases
CAGCCGATCTCCCCCAATCTCCCCCACGAGGGGGAGATTGGCAGTTTGCTGCCGGCAATCACCCGATCCCCAGCCGCTTC
GCCAGATCCGACAGCATCGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MVYATSDGSAGKRLRVGMVGGGRNAFIGAVHRLAMRLDDQIVLVAGALSSDPENAAASAAEIGIAPERSYADYHAMALAE
AARPDGIEAVVIVTPNHLHAPIATAFLEAGIDVICDKPLSTTLRDAEALVTLARAKKRRFVVTLNNTGYAMVRQAREMVM
AGELGRIVSVHGAYIQDWLTRPIDAEGQKQAEWRTDPARAGQSAVLADIGVHAFNLASYISSCEAEAVSADLFTAVPGRR
LDDNAHVMVRWTDGARGTILASQTSPGHYYDLSVRIYGDKAGLEWSGGRPEELRFSVYGEETRTLVRGGHGSTEESRRVS
RMPAAHPEGYIEAFANFYRDAADIIRAHRSGGVVDAARAAQVPDVVDGARGVKFVAAAVASNAAGGAWTAARFAG

Sequences:

>Translated_395_residues
MVYATSDGSAGKRLRVGMVGGGRNAFIGAVHRLAMRLDDQIVLVAGALSSDPENAAASAAEIGIAPERSYADYHAMALAE
AARPDGIEAVVIVTPNHLHAPIATAFLEAGIDVICDKPLSTTLRDAEALVTLARAKKRRFVVTLNNTGYAMVRQAREMVM
AGELGRIVSVHGAYIQDWLTRPIDAEGQKQAEWRTDPARAGQSAVLADIGVHAFNLASYISSCEAEAVSADLFTAVPGRR
LDDNAHVMVRWTDGARGTILASQTSPGHYYDLSVRIYGDKAGLEWSGGRPEELRFSVYGEETRTLVRGGHGSTEESRRVS
RMPAAHPEGYIEAFANFYRDAADIIRAHRSGGVVDAARAAQVPDVVDGARGVKFVAAAVASNAAGGAWTAARFAG
>Mature_395_residues
MVYATSDGSAGKRLRVGMVGGGRNAFIGAVHRLAMRLDDQIVLVAGALSSDPENAAASAAEIGIAPERSYADYHAMALAE
AARPDGIEAVVIVTPNHLHAPIATAFLEAGIDVICDKPLSTTLRDAEALVTLARAKKRRFVVTLNNTGYAMVRQAREMVM
AGELGRIVSVHGAYIQDWLTRPIDAEGQKQAEWRTDPARAGQSAVLADIGVHAFNLASYISSCEAEAVSADLFTAVPGRR
LDDNAHVMVRWTDGARGTILASQTSPGHYYDLSVRIYGDKAGLEWSGGRPEELRFSVYGEETRTLVRGGHGSTEESRRVS
RMPAAHPEGYIEAFANFYRDAADIIRAHRSGGVVDAARAAQVPDVVDGARGVKFVAAAVASNAAGGAWTAARFAG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683
- InterPro:   IPR004104 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA; PF02894 GFO_IDH_MocA_C [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 41955; Mature: 41955

Theoretical pI: Translated: 6.75; Mature: 6.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVYATSDGSAGKRLRVGMVGGGRNAFIGAVHRLAMRLDDQIVLVAGALSSDPENAAASAA
CEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
EIGIAPERSYADYHAMALAEAARPDGIEAVVIVTPNHLHAPIATAFLEAGIDVICDKPLS
HCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEECCCHH
TTLRDAEALVTLARAKKRRFVVTLNNTGYAMVRQAREMVMAGELGRIVSVHGAYIQDWLT
HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHC
RPIDAEGQKQAEWRTDPARAGQSAVLADIGVHAFNLASYISSCEAEAVSADLFTAVPGRR
CCCCCCCCCCCCCCCCHHHCCCCEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDDNAHVMVRWTDGARGTILASQTSPGHYYDLSVRIYGDKAGLEWSGGRPEELRFSVYGE
CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECC
ETRTLVRGGHGSTEESRRVSRMPAAHPEGYIEAFANFYRDAADIIRAHRSGGVVDAARAA
HHHHEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHC
QVPDVVDGARGVKFVAAAVASNAAGGAWTAARFAG
CCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCC
>Mature Secondary Structure
MVYATSDGSAGKRLRVGMVGGGRNAFIGAVHRLAMRLDDQIVLVAGALSSDPENAAASAA
CEEECCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHH
EIGIAPERSYADYHAMALAEAARPDGIEAVVIVTPNHLHAPIATAFLEAGIDVICDKPLS
HCCCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCCCCHHHHHHHHHCCCCEEECCCHH
TTLRDAEALVTLARAKKRRFVVTLNNTGYAMVRQAREMVMAGELGRIVSVHGAYIQDWLT
HHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCEEEHHHHHHHHHHC
RPIDAEGQKQAEWRTDPARAGQSAVLADIGVHAFNLASYISSCEAEAVSADLFTAVPGRR
CCCCCCCCCCCCCCCCHHHCCCCEEHHHHCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LDDNAHVMVRWTDGARGTILASQTSPGHYYDLSVRIYGDKAGLEWSGGRPEELRFSVYGE
CCCCCEEEEEECCCCCEEEEEECCCCCEEEEEEEEEEECCCCCCCCCCCCCEEEEEEECC
ETRTLVRGGHGSTEESRRVSRMPAAHPEGYIEAFANFYRDAADIIRAHRSGGVVDAARAA
HHHHEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHC
QVPDVVDGARGVKFVAAAVASNAAGGAWTAARFAG
CCCHHHCCCCHHHHHHHHHHCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9163424 [H]