| Definition | Mesorhizobium loti MAFF303099 chromosome, complete genome. |
|---|---|
| Accession | NC_002678 |
| Length | 7,036,071 |
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The map label for this gene is 13471778
Identifier: 13471778
GI number: 13471778
Start: 1535506
End: 1536249
Strand: Direct
Name: 13471778
Synonym: mlr1862
Alternate gene names: NA
Gene position: 1535506-1536249 (Clockwise)
Preceding gene: 13471777
Following gene: 13471780
Centisome position: 21.82
GC content: 66.8
Gene sequence:
>744_bases ATGAACGCCCACGCCAAGGTTGCCGCACCCGTTGTGGAAGCCGCCGAAACACGCGTCGCCACTTACGACTGGCCGGCGCT GGCCGCCGAACTCGACGGCTTCGGCTGCGCGGTGATGGAAAAGCTGCTCACGCCCGAAGAGTGCCGGCAGATCGCCGGCC TCTACATCAAGGAACAACATTTCCGCAGCCACATCCACATGGCCAGGCACGGTTTCGGTAAGGGCGAGTATCGCTACTTC CGCTATCCCTTGCCGGATCTGCTCGGCGGGTTGCGCAGCGCGCTCTATCCCAGGCTGGGCGAGGTCGCCAACCGCTGGAA CGAGCGCATGGCGATCCCGCTGCGCTACCCCGCCACGCATGCCGATTTTCTCGACCAGTGCCACGCCGCCGGCCAGGTCA GGCCGACGCCGCTTCTGCTGCAATATGTCCCCGGCGACTTCAACTGCCTGCACCAGGACCTCTATGGCGACCTCGCCTTT CCCCTGCAGGTGGCGATCCTGCTCTCCGAGCCGGGCAAGGATTTCACCGGCGGCGAGTTCGCGCTGACCGAGCAGCGGCC GCGCATGCAGAGCCGGGTCGAGGTGGTGCCCTTGCGCCAGGGCGACGCCGTGGCCTTCGCCGTCCACAACCGGCCGGTGC AGGGAACGAAAGGCAACTACCGCGTCAACCTGCGCCACGGCGTCAGCCGCCTGCGCTCAGGCATGCGCCACACGGTCGGC ATCATCTTCCACGACGCGAGGTGA
Upstream 100 bases:
>100_bases GCATTCCCTGCCACCGCGTTGTCCGTGCCGACGGCACGCTGTCGGGCTACCGCTGGGGCATCGAACGCAAGCGCGCTTTG CTCGATAAGGAGGCCGCGAT
Downstream 100 bases:
>100_bases AGTGCCGGCTCACGTCTCCCAATAGGGCGGATCGCCAAAGGCATCGCGTAGCCATGCGGTGAGCGCTCGCAGTTTGGCGG ATCCGCGCCTGTCCTCGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MNAHAKVAAPVVEAAETRVATYDWPALAAELDGFGCAVMEKLLTPEECRQIAGLYIKEQHFRSHIHMARHGFGKGEYRYF RYPLPDLLGGLRSALYPRLGEVANRWNERMAIPLRYPATHADFLDQCHAAGQVRPTPLLLQYVPGDFNCLHQDLYGDLAF PLQVAILLSEPGKDFTGGEFALTEQRPRMQSRVEVVPLRQGDAVAFAVHNRPVQGTKGNYRVNLRHGVSRLRSGMRHTVG IIFHDAR
Sequences:
>Translated_247_residues MNAHAKVAAPVVEAAETRVATYDWPALAAELDGFGCAVMEKLLTPEECRQIAGLYIKEQHFRSHIHMARHGFGKGEYRYF RYPLPDLLGGLRSALYPRLGEVANRWNERMAIPLRYPATHADFLDQCHAAGQVRPTPLLLQYVPGDFNCLHQDLYGDLAF PLQVAILLSEPGKDFTGGEFALTEQRPRMQSRVEVVPLRQGDAVAFAVHNRPVQGTKGNYRVNLRHGVSRLRSGMRHTVG IIFHDAR >Mature_247_residues MNAHAKVAAPVVEAAETRVATYDWPALAAELDGFGCAVMEKLLTPEECRQIAGLYIKEQHFRSHIHMARHGFGKGEYRYF RYPLPDLLGGLRSALYPRLGEVANRWNERMAIPLRYPATHADFLDQCHAAGQVRPTPLLLQYVPGDFNCLHQDLYGDLAF PLQVAILLSEPGKDFTGGEFALTEQRPRMQSRVEVVPLRQGDAVAFAVHNRPVQGTKGNYRVNLRHGVSRLRSGMRHTVG IIFHDAR
Specific function: Unknown
COG id: COG3826
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018655 [H]
Pfam domain/function: PF09859 DUF2086 [H]
EC number: NA
Molecular weight: Translated: 27752; Mature: 27752
Theoretical pI: Translated: 8.86; Mature: 8.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAHAKVAAPVVEAAETRVATYDWPALAAELDGFGCAVMEKLLTPEECRQIAGLYIKEQH CCCCHHHHHHHHHHHHCEEEECCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH FRSHIHMARHGFGKGEYRYFRYPLPDLLGGLRSALYPRLGEVANRWNERMAIPLRYPATH HHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCH ADFLDQCHAAGQVRPTPLLLQYVPGDFNCLHQDLYGDLAFPLQVAILLSEPGKDFTGGEF HHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCCEE ALTEQRPRMQSRVEVVPLRQGDAVAFAVHNRPVQGTKGNYRVNLRHGVSRLRSGMRHTVG EECCCCCHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHCHHHEEE IIFHDAR EEEECCC >Mature Secondary Structure MNAHAKVAAPVVEAAETRVATYDWPALAAELDGFGCAVMEKLLTPEECRQIAGLYIKEQH CCCCHHHHHHHHHHHHCEEEECCCHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHH FRSHIHMARHGFGKGEYRYFRYPLPDLLGGLRSALYPRLGEVANRWNERMAIPLRYPATH HHHHHHHHHCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCH ADFLDQCHAAGQVRPTPLLLQYVPGDFNCLHQDLYGDLAFPLQVAILLSEPGKDFTGGEF HHHHHHHHHCCCCCCCCEEEEECCCCHHHHHHHHHCCHHHHHEEEEEECCCCCCCCCCEE ALTEQRPRMQSRVEVVPLRQGDAVAFAVHNRPVQGTKGNYRVNLRHGVSRLRSGMRHTVG EECCCCCHHHCCCEEEEECCCCEEEEEEECCCCCCCCCCEEEEHHHHHHHHHHCHHHEEE IIFHDAR EEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]